RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W STP2P38704 541 aa5.72□□□□□ -1.49
CAF40YNL288W ALG5P40350 334 aa5.72□□□□□ -1.49
CAF40YNL288W PMT3P47190 753 aa5.72□□□□□ -1.49
CAF40YNL288W MSC1Q03104 513 aa5.72□□□□□ -1.49
CAF40YNL288W OSW1Q08692 278 aa5.72□□□□□ -1.49
CAF40YNL288W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
CAF40YNL288W TOR1P35169 2470 aa5.71□□□□□ -1.49
CAF40YNL288W ATP2P00830 511 aaKnown RBP5.71□□□□□ -1.5
CAF40YNL288W URA4P20051 364 aa5.71□□□□□ -1.5
CAF40YNL288W SIN4P32259 974 aa5.71□□□□□ -1.5
CAF40YNL288W NUP2P32499 720 aa5.71□□□□□ -1.5
CAF40YNL288W RPS27AP35997 82 aaKnown RBP5.71□□□□□ -1.5
CAF40YNL288W RPS27BP38711 82 aa5.71□□□□□ -1.5
CAF40YNL288W MNN9P39107 395 aaKnown RBP5.71□□□□□ -1.5
CAF40YNL288W YIL152WP40455 235 aa5.71□□□□□ -1.5
CAF40YNL288W PMT4P46971 762 aa5.71□□□□□ -1.5
CAF40YNL288W STE24P47154 453 aa5.71□□□□□ -1.5
CAF40YNL288W JHD2P47156 728 aaPredicted RBP5.71□□□□□ -1.5
CAF40YNL288W PBP1P53297 722 aaKnown RBP5.71□□□□□ -1.5
CAF40YNL288W RHO4Q00246 291 aa5.71□□□□□ -1.5
CAF40YNL288W YMR102CQ03177 834 aa5.71□□□□□ -1.5
CAF40YNL288W PLB2Q03674 706 aa5.71□□□□□ -1.5
CAF40YNL288W TRS23Q03784 219 aa5.71□□□□□ -1.5
CAF40YNL288W YDR338CQ05497 695 aa5.71□□□□□ -1.5
CAF40YNL288W YLR036CQ07986 203 aa5.71□□□□□ -1.5
CAF40YNL288W YOL131WQ08270 108 aa5.71□□□□□ -1.5
CAF40YNL288W YPL225WQ08971 146 aaKnown RBP5.71□□□□□ -1.5
CAF40YNL288W BRR2P32639 2163 aaKnown RBP5.7□□□□□ -1.5
CAF40YNL288W MSS18P08593 268 aa5.7□□□□□ -1.5
CAF40YNL288W RPB5P20434 215 aa5.7□□□□□ -1.5
CAF40YNL288W MXR2P25566 168 aa5.7□□□□□ -1.5
CAF40YNL288W YCL049CP25577 312 aa5.7□□□□□ -1.5
CAF40YNL288W SBA1P28707 216 aaKnown RBP5.7□□□□□ -1.5
CAF40YNL288W DCG1P32460 244 aa5.7□□□□□ -1.5
CAF40YNL288W PDR3P33200 976 aa5.7□□□□□ -1.5
CAF40YNL288W MSN2P33748 704 aa5.7□□□□□ -1.5
CAF40YNL288W RCK1P38622 512 aa5.7□□□□□ -1.5
CAF40YNL288W YHR210CP38893 341 aa5.7□□□□□ -1.5
CAF40YNL288W FAD1P38913 306 aa5.7□□□□□ -1.5
CAF40YNL288W DSS1P39112 969 aa5.7□□□□□ -1.5
CAF40YNL288W AIM2P39721 246 aa5.7□□□□□ -1.5
CAF40YNL288W YJL068CP40363 299 aa5.7□□□□□ -1.5
CAF40YNL288W LYS12P40495 371 aaKnown RBP5.7□□□□□ -1.5
CAF40YNL288W ICE2P40499 491 aa5.7□□□□□ -1.5
CAF40YNL288W MAM33P40513 266 aa5.7□□□□□ -1.5
CAF40YNL288W PAC10P48363 199 aa5.7□□□□□ -1.5
CAF40YNL288W TOM22P49334 152 aa5.7□□□□□ -1.5
CAF40YNL288W KEL2P50090 882 aa5.7□□□□□ -1.5
CAF40YNL288W RNH70P53331 553 aa5.7□□□□□ -1.5
CAF40YNL288W REC102Q02721 264 aa5.7□□□□□ -1.5
CAF40YNL288W OAZ1Q02803 292 aa5.7□□□□□ -1.5
CAF40YNL288W ATG26Q06321 1198 aa5.7□□□□□ -1.5
CAF40YNL288W GLE1Q12315 538 aa5.7□□□□□ -1.5
CAF40YNL288W YOR019WQ99248 730 aa5.7□□□□□ -1.5
CAF40YNL288W ACC1Q00955 2233 aaKnown RBP5.69□□□□□ -1.5
CAF40YNL288W YLR358CO13565 187 aa5.69□□□□□ -1.5
CAF40YNL288W COX1P00401 534 aa5.69□□□□□ -1.5
CAF40YNL288W UGA1P17649 471 aa5.69□□□□□ -1.5
CAF40YNL288W ARE1P25628 610 aa5.69□□□□□ -1.5
CAF40YNL288W FAA1P30624 700 aaKnown RBP5.69□□□□□ -1.5
CAF40YNL288W PMT2P31382 759 aa5.69□□□□□ -1.5
CAF40YNL288W TFC1P32367 649 aa5.69□□□□□ -1.5
CAF40YNL288W TRR2P38816 342 aa5.69□□□□□ -1.5
CAF40YNL288W VPS52P39904 641 aa5.69□□□□□ -1.5
CAF40YNL288W TPA1P40032 644 aaKnown RBP5.69□□□□□ -1.5
CAF40YNL288W JEM1P40358 645 aa5.69□□□□□ -1.5
CAF40YNL288W UBC9P50623 157 aaPredicted RBP5.69□□□□□ -1.5
CAF40YNL288W YNL033WP53964 284 aa5.69□□□□□ -1.5
CAF40YNL288W YNL019CP53975 284 aa5.69□□□□□ -1.5
CAF40YNL288W PEX25Q02969 394 aa5.69□□□□□ -1.5
CAF40YNL288W UGO1Q03327 502 aa5.69□□□□□ -1.5
CAF40YNL288W ACL4Q03771 387 aa5.69□□□□□ -1.5
CAF40YNL288W YMR310CQ04867 317 aaPredicted RBP5.69□□□□□ -1.5
CAF40YNL288W MFG1Q07684 458 aa5.69□□□□□ -1.5
CAF40YNL288W FDH1Q08911 376 aa5.69□□□□□ -1.5
CAF40YNL288W YOR389WQ08912 624 aa5.69□□□□□ -1.5
CAF40YNL288W YPL278CQ08990 100 aa5.69□□□□□ -1.5
CAF40YNL288W REX3Q12090 404 aa5.69□□□□□ -1.5
CAF40YNL288W FRE7Q12333 620 aa5.69□□□□□ -1.5
CAF40YNL288W ADF1Q2V2Q1 113 aa5.69□□□□□ -1.5
CAF40YNL288W TEL1P38110 2787 aa5.69□□□□□ -1.5
CAF40YNL288W PUT2P07275 575 aa5.68□□□□□ -1.5
CAF40YNL288W APN1P22936 367 aa5.68□□□□□ -1.5
CAF40YNL288W LDB16P25587 256 aa5.68□□□□□ -1.5
CAF40YNL288W MRP8P35719 219 aa5.68□□□□□ -1.5
CAF40YNL288W VPS51P36116 164 aa5.68□□□□□ -1.5
CAF40YNL288W BET3P36149 193 aa5.68□□□□□ -1.5
CAF40YNL288W YHR177WP38867 453 aa5.68□□□□□ -1.5
CAF40YNL288W MBP1P39678 833 aa5.68□□□□□ -1.5
CAF40YNL288W MTW1P39731 289 aa5.68□□□□□ -1.5
CAF40YNL288W FMP52P40008 231 aa5.68□□□□□ -1.5
CAF40YNL288W RPS12P48589 143 aaKnown RBP5.68□□□□□ -1.5
CAF40YNL288W HOS2P53096 452 aaPredicted RBP5.68□□□□□ -1.5
CAF40YNL288W LCL3P53153 274 aa5.68□□□□□ -1.5
CAF40YNL288W GET1P53192 235 aa5.68□□□□□ -1.5
CAF40YNL288W GPI1P53306 609 aa5.68□□□□□ -1.5
CAF40YNL288W YMR210WQ03649 449 aa5.68□□□□□ -1.5
CAF40YNL288W YKU80Q04437 629 aa5.68□□□□□ -1.5
CAF40YNL288W SPC2Q04969 178 aa5.68□□□□□ -1.5
CAF40YNL288W YPR172WQ06608 200 aa5.68□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 56.3 ms