RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeastyeast

Gene BER1, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BER1YLR412W ALG1P16661 449 aa2.22□□□□□ -2.05
BER1YLR412W ZRC1P20107 442 aa2.22□□□□□ -2.05
BER1YLR412W RPC53P25441 422 aa2.22□□□□□ -2.05
BER1YLR412W RIM1P32445 135 aaKnown RBP2.22□□□□□ -2.05
BER1YLR412W STN1P38960 494 aa2.22□□□□□ -2.05
BER1YLR412W ALD5P40047 520 aaKnown RBP2.22□□□□□ -2.05
BER1YLR412W ZIM17P42844 174 aa2.22□□□□□ -2.05
BER1YLR412W TCB2P48231 1178 aa2.22□□□□□ -2.05
BER1YLR412W YGL262WP53054 175 aa2.22□□□□□ -2.05
BER1YLR412W PIB2P53191 635 aa2.22□□□□□ -2.05
BER1YLR412W YGR117CP53270 476 aa2.22□□□□□ -2.05
BER1YLR412W IES4Q08561 116 aa2.22□□□□□ -2.05
BER1YLR412W FCY22Q12119 530 aa2.22□□□□□ -2.05
BER1YLR412W RUP1Q12242 671 aa2.22□□□□□ -2.05
BER1YLR412W CPR2P23285 205 aa2.21□□□□□ -2.06
BER1YLR412W COX13P32799 129 aa2.21□□□□□ -2.06
BER1YLR412W ECM8P38246 354 aa2.21□□□□□ -2.06
BER1YLR412W INM1P38710 295 aa2.21□□□□□ -2.06
BER1YLR412W IGD1P43598 195 aa2.21□□□□□ -2.06
BER1YLR412W FOL3Q12676 427 aaPredicted RBP2.21□□□□□ -2.06
BER1YLR412W HTZ1Q12692 134 aaKnown RBP2.21□□□□□ -2.06
BER1YLR412W HSP104P31539 908 aaKnown RBP2.2□□□□□ -2.06
BER1YLR412W RAD5P32849 1169 aaPredicted RBP2.2□□□□□ -2.06
BER1YLR412W GPI16P38875 610 aa2.2□□□□□ -2.06
BER1YLR412W FLC3P53121 802 aa2.2□□□□□ -2.06
BER1YLR412W KTR6P54070 446 aa2.2□□□□□ -2.06
BER1YLR412W TPS1Q00764 495 aaKnown RBP2.2□□□□□ -2.06
BER1YLR412W RMT2Q03305 412 aa2.2□□□□□ -2.06
BER1YLR412W VPS72Q03388 795 aa2.2□□□□□ -2.06
BER1YLR412W AIM32Q04689 311 aa2.2□□□□□ -2.06
BER1YLR412W YLR345WQ06137 509 aa2.2□□□□□ -2.06
BER1YLR412W YLR456WQ06199 204 aa2.2□□□□□ -2.06
BER1YLR412W MCH1Q07376 486 aa2.2□□□□□ -2.06
BER1YLR412W PAB1P04147 577 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06 RIP-Chip
BER1YLR412W MRPL27P36526 146 aaPredicted RBP2.19□□□□□ -2.06
BER1YLR412W GPX2P38143 162 aa2.19□□□□□ -2.06
BER1YLR412W FAD1P38913 306 aa2.19□□□□□ -2.06
BER1YLR412W STE24P47154 453 aa2.19□□□□□ -2.06
BER1YLR412W TOS2P50078 622 aa2.19□□□□□ -2.06
BER1YLR412W YIP5P53108 310 aa2.19□□□□□ -2.06
BER1YLR412W SPC19Q03954 165 aa2.19□□□□□ -2.06
BER1YLR412W YDL114WQ07530 308 aa2.19□□□□□ -2.06
BER1YLR412W YDL199CQ12407 687 aa2.19□□□□□ -2.06
BER1YLR412W OPI3P05375 206 aa2.18□□□□□ -2.06
BER1YLR412W DEP1P31385 405 aa2.18□□□□□ -2.06
BER1YLR412W SKT5P34226 696 aa2.18□□□□□ -2.06
BER1YLR412W SEC9P40357 651 aa2.18□□□□□ -2.06
BER1YLR412W ATM1P40416 690 aa2.18□□□□□ -2.06
BER1YLR412W YGR111WP53265 400 aa2.18□□□□□ -2.06
BER1YLR412W TRM112P53738 135 aaPredicted RBP2.18□□□□□ -2.06
BER1YLR412W YDR341CQ05506 607 aaKnown RBP2.18□□□□□ -2.06
BER1YLR412W RNH203Q12338 110 aa2.18□□□□□ -2.06
BER1YLR412W YOP1Q12402 180 aa2.18□□□□□ -2.06
BER1YLR412W ISA2Q12425 185 aa2.18□□□□□ -2.06
BER1YLR412W SLM5P25345 492 aaKnown RBP2.17□□□□□ -2.06
BER1YLR412W FUN26P31381 517 aa2.17□□□□□ -2.06
BER1YLR412W DBF4P32325 704 aa2.17□□□□□ -2.06
BER1YLR412W ECT1P33412 323 aa2.17□□□□□ -2.06
BER1YLR412W MCR1P36060 302 aaKnown RBP2.17□□□□□ -2.06
BER1YLR412W ATP22P50273 684 aaPredicted RBP2.17□□□□□ -2.06
BER1YLR412W YHC1Q05900 231 aaKnown RBP2.17□□□□□ -2.06
BER1YLR412W ECM7Q06200 448 aa2.17□□□□□ -2.06
BER1YLR412W NSE1Q07913 336 aa2.17□□□□□ -2.06
BER1YLR412W UAF30Q08747 228 aa2.17□□□□□ -2.06
BER1YLR412W TPK3P05986 398 aa2.16□□□□□ -2.06
BER1YLR412W MDH1P17505 334 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
BER1YLR412W CMK2P22517 447 aa2.16□□□□□ -2.06
BER1YLR412W DPH2P32461 534 aa2.16□□□□□ -2.06
BER1YLR412W ZUO1P32527 433 aaKnown RBP2.16□□□□□ -2.06
BER1YLR412W NRP1P32770 719 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
BER1YLR412W TIR2P33890 251 aa2.16□□□□□ -2.06
BER1YLR412W QDR3P38227 689 aa2.16□□□□□ -2.06
BER1YLR412W GEP4P38812 185 aa2.16□□□□□ -2.06
BER1YLR412W YFL012WP43580 148 aa2.16□□□□□ -2.06
BER1YLR412W PMT5P52867 743 aa2.16□□□□□ -2.06
BER1YLR412W RRN9P53437 365 aa2.16□□□□□ -2.06
BER1YLR412W DCI1Q08558 271 aa2.16□□□□□ -2.06
BER1YLR412W PDE2P06776 526 aa2.15□□□□□ -2.07
BER1YLR412W RPL12AP0CX53 165 aaKnown RBP2.15□□□□□ -2.07
BER1YLR412W RPL12BP0CX54 165 aa2.15□□□□□ -2.07
BER1YLR412W PHO91P27514 894 aa2.15□□□□□ -2.07
BER1YLR412W SPO23P33757 523 aa2.15□□□□□ -2.07
BER1YLR412W DOA1P36037 715 aa2.15□□□□□ -2.07
BER1YLR412W WSC4P38739 605 aa2.15□□□□□ -2.07
BER1YLR412W AIP1P46680 615 aaKnown RBP2.15□□□□□ -2.07
BER1YLR412W ROG1P53118 685 aa2.15□□□□□ -2.07
BER1YLR412W RPL21AQ02753 160 aaKnown RBP2.15□□□□□ -2.07
BER1YLR412W YPL107WQ02873 248 aa2.15□□□□□ -2.07
BER1YLR412W ENT5Q03769 411 aaKnown RBP2.15□□□□□ -2.07
BER1YLR412W PIN3Q06449 215 aa2.15□□□□□ -2.07
BER1YLR412W MCT1Q12283 360 aa2.15□□□□□ -2.07
BER1YLR412W RAX2Q12465 1220 aa2.15□□□□□ -2.07
BER1YLR412W PCL9Q12477 304 aa2.15□□□□□ -2.07
BER1YLR412W RPL21BQ12672 160 aaKnown RBP2.15□□□□□ -2.07
BER1YLR412W STE7P06784 515 aa2.14□□□□□ -2.07
BER1YLR412W ARF1P11076 181 aaKnown RBP2.14□□□□□ -2.07
BER1YLR412W GIT1P25346 518 aa2.14□□□□□ -2.07
BER1YLR412W YSC83P32792 385 aa2.14□□□□□ -2.07
BER1YLR412W DTR1P38125 572 aa2.14□□□□□ -2.07
BER1YLR412W PFF1P38244 976 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms