RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C MMT1Q03218 510 aa3.84□□□□□ -1.79
SRP40YKR092C PRM15Q03262 622 aa3.84□□□□□ -1.79
SRP40YKR092C SLD5Q03406 294 aa3.84□□□□□ -1.79
SRP40YKR092C PLM2Q04383 521 aa3.84□□□□□ -1.79
SRP40YKR092C SWF1Q04629 336 aa3.84□□□□□ -1.79
SRP40YKR092C COX20Q04935 205 aa3.84□□□□□ -1.79
SRP40YKR092C COQ11Q05892 277 aa3.84□□□□□ -1.79
SRP40YKR092C SNA4Q07549 140 aa3.84□□□□□ -1.79
SRP40YKR092C YOL019WQ08157 551 aa3.84□□□□□ -1.79
SRP40YKR092C YAP7Q08182 245 aa3.84□□□□□ -1.79
SRP40YKR092C CSM4Q08955 156 aa3.84□□□□□ -1.79
SRP40YKR092C AKR2Q12013 749 aa3.84□□□□□ -1.79
SRP40YKR092C SPE3Q12074 293 aaKnown RBP3.84□□□□□ -1.79
SRP40YKR092C ATG9Q12142 997 aa3.84□□□□□ -1.79
SRP40YKR092C LCB4Q12246 624 aa3.84□□□□□ -1.79
SRP40YKR092C INP53Q12271 1107 aa3.84□□□□□ -1.79
SRP40YKR092C RPL24AP04449 155 aaKnown RBP3.83□□□□□ -1.8
SRP40YKR092C MET17P06106 444 aa3.83□□□□□ -1.8
SRP40YKR092C QCR2P07257 368 aa3.83□□□□□ -1.8
SRP40YKR092C DST1P07273 309 aa3.83□□□□□ -1.8
SRP40YKR092C YGL041W-AP0C5N3 154 aa3.83□□□□□ -1.8
SRP40YKR092C NHP6AP11632 93 aaKnown RBP3.83□□□□□ -1.8
SRP40YKR092C HPR1P17629 752 aaKnown RBP3.83□□□□□ -1.8
SRP40YKR092C SNF6P18888 332 aa3.83□□□□□ -1.8
SRP40YKR092C CPR2P23285 205 aa3.83□□□□□ -1.8
SRP40YKR092C BUD5P25300 642 aaPredicted RBP3.83□□□□□ -1.8
SRP40YKR092C RAD57P25301 460 aa3.83□□□□□ -1.8
SRP40YKR092C YCL049CP25577 312 aa3.83□□□□□ -1.8
SRP40YKR092C CSM1P25651 190 aa3.83□□□□□ -1.8
SRP40YKR092C CIN8P27895 1000 aa3.83□□□□□ -1.8
SRP40YKR092C GCS1P35197 352 aa3.83□□□□□ -1.8
SRP40YKR092C VPS21P36017 210 aaKnown RBP3.83□□□□□ -1.8
SRP40YKR092C AIM29P36154 155 aa3.83□□□□□ -1.8
SRP40YKR092C RPF2P36160 344 aaKnown RBP3.83□□□□□ -1.8
SRP40YKR092C AME1P38313 324 aa3.83□□□□□ -1.8
SRP40YKR092C JHD1P40034 492 aa3.83□□□□□ -1.8
SRP40YKR092C PDS1P40316 373 aaPredicted RBP3.83□□□□□ -1.8
SRP40YKR092C SNM1P40993 198 aa3.83□□□□□ -1.8
SRP40YKR092C BST1P43571 1029 aa3.83□□□□□ -1.8
SRP40YKR092C BNA3P47039 444 aaKnown RBP3.83□□□□□ -1.8
SRP40YKR092C ZAP1P47043 880 aa3.83□□□□□ -1.8
SRP40YKR092C YJR154WP47181 346 aa3.83□□□□□ -1.8
SRP40YKR092C RPS7BP48164 190 aaKnown RBP3.83□□□□□ -1.8
SRP40YKR092C PAC10P48363 199 aa3.83□□□□□ -1.8
SRP40YKR092C PRP24P49960 444 aaKnown RBP3.83□□□□□ -1.8
SRP40YKR092C IMD3P50095 523 aaKnown RBP3.83□□□□□ -1.8
SRP40YKR092C CUE3P53137 624 aaKnown RBP3.83□□□□□ -1.8
SRP40YKR092C PKP2P53170 491 aa3.83□□□□□ -1.8
SRP40YKR092C ARE2P53629 642 aaKnown RBP3.83□□□□□ -1.8
SRP40YKR092C MPS1P54199 764 aa3.83□□□□□ -1.8
SRP40YKR092C AAT1Q01802 451 aa3.83□□□□□ -1.8
SRP40YKR092C MTG1Q03151 367 aaPredicted RBP3.83□□□□□ -1.8
SRP40YKR092C HRD3Q05787 833 aa3.83□□□□□ -1.8
SRP40YKR092C YLR283WQ05867 314 aa3.83□□□□□ -1.8
SRP40YKR092C VID22Q05934 901 aa3.83□□□□□ -1.8
SRP40YKR092C YPR127WQ06494 345 aa3.83□□□□□ -1.8
SRP40YKR092C GPN3Q06543 272 aa3.83□□□□□ -1.8
SRP40YKR092C CYK3Q07533 885 aa3.83□□□□□ -1.8
SRP40YKR092C YOL075CQ08234 1294 aa3.83□□□□□ -1.8
SRP40YKR092C ZEO1Q08245 113 aa3.83□□□□□ -1.8
SRP40YKR092C UAF30Q08747 228 aa3.83□□□□□ -1.8
SRP40YKR092C AFT2Q08957 416 aa3.83□□□□□ -1.8
SRP40YKR092C LEA1Q08963 238 aaPredicted RBP3.83□□□□□ -1.8
SRP40YKR092C YLR053CQ12026 108 aa3.83□□□□□ -1.8
SRP40YKR092C SWT1Q12104 458 aa3.83□□□□□ -1.8
SRP40YKR092C WIP1Q2V2P8 89 aa3.83□□□□□ -1.8
SRP40YKR092C YNL162W-AQ3E7A8 72 aa3.83□□□□□ -1.8
SRP40YKR092C PNO1Q99216 274 aaKnown RBP3.83□□□□□ -1.8
SRP40YKR092C Q0144Q9ZZW2 109 aa3.83□□□□□ -1.8
SRP40YKR092C Q0010Q9ZZX9 128 aa3.83□□□□□ -1.8
SRP40YKR092C BI2P03873 423 aa3.82□□□□□ -1.8
SRP40YKR092C YMR085WP0CF18 432 aa3.82□□□□□ -1.8
SRP40YKR092C IFM1P25038 676 aa3.82□□□□□ -1.8
SRP40YKR092C PET18P25362 215 aa3.82□□□□□ -1.8
SRP40YKR092C URK1P27515 501 aa3.82□□□□□ -1.8
SRP40YKR092C IDH1P28834 360 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
SRP40YKR092C ARO4P32449 370 aaKnown RBP3.82□□□□□ -1.8
SRP40YKR092C SPT10P35208 640 aa3.82□□□□□ -1.8
SRP40YKR092C ADH5P38113 351 aaKnown RBP3.82□□□□□ -1.8
SRP40YKR092C DDI1P40087 428 aa3.82□□□□□ -1.8
SRP40YKR092C YMR147WP40218 223 aaKnown RBP3.82□□□□□ -1.8
SRP40YKR092C ERG10P41338 398 aaKnown RBP3.82□□□□□ -1.8
SRP40YKR092C SSU1P41930 458 aa3.82□□□□□ -1.8
SRP40YKR092C SIP4P46954 829 aa3.82□□□□□ -1.8
SRP40YKR092C AIM24P47127 394 aa3.82□□□□□ -1.8
SRP40YKR092C YGL138CP53122 345 aa3.82□□□□□ -1.8
SRP40YKR092C TIM21P53220 239 aa3.82□□□□□ -1.8
SRP40YKR092C TAM41P53230 385 aa3.82□□□□□ -1.8
SRP40YKR092C TWF1P53250 332 aa3.82□□□□□ -1.8
SRP40YKR092C YSA1Q01976 231 aa3.82□□□□□ -1.8
SRP40YKR092C UTP6Q02354 440 aaKnown RBP3.82□□□□□ -1.8
SRP40YKR092C HER2Q03557 464 aa3.82□□□□□ -1.8
SRP40YKR092C YMR010WQ03687 405 aa3.82□□□□□ -1.8
SRP40YKR092C URH1Q04179 340 aa3.82□□□□□ -1.8
SRP40YKR092C ECM22Q05958 814 aaPredicted RBP3.82□□□□□ -1.8
SRP40YKR092C FAR10Q06001 478 aa3.82□□□□□ -1.8
SRP40YKR092C YLL007CQ07799 665 aa3.82□□□□□ -1.8
SRP40YKR092C PML1Q07930 204 aaPredicted RBP3.82□□□□□ -1.8
SRP40YKR092C GSH2Q08220 491 aa3.82□□□□□ -1.8
SRP40YKR092C AGC1Q12482 902 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms