RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W RPL40AP0CH08 128 aaKnown RBP12.95□□□□□ -0.34
RPN10YHR200W RPL40BP0CH09 128 aaKnown RBP12.95□□□□□ -0.34
RPN10YHR200W TAL1P15019 335 aaKnown RBP12.95□□□□□ -0.34
RPN10YHR200W IDH1P28834 360 aaKnown RBP RIP-Chip data12.95□□□□□ -0.34not detected
RPN10YHR200W RPN2P32565 945 aaKnown RBP12.95□□□□□ -0.34
RPN10YHR200W KAP122P32767 1081 aa12.95□□□□□ -0.34
RPN10YHR200W IFA38P38286 347 aa12.95□□□□□ -0.34
RPN10YHR200W YIL086CP40503 102 aa12.95□□□□□ -0.34
RPN10YHR200W NAT4Q04751 285 aa12.95□□□□□ -0.34
RPN10YHR200W TPK3P05986 398 aa12.94□□□□□ -0.34
RPN10YHR200W APN1P22936 367 aa12.94□□□□□ -0.34
RPN10YHR200W CNA1P23287 553 aa12.94□□□□□ -0.34
RPN10YHR200W COG3P40094 801 aa12.94□□□□□ -0.34
RPN10YHR200W YTA6P40328 754 aa12.94□□□□□ -0.34
RPN10YHR200W APS3P47064 194 aa12.94□□□□□ -0.34
RPN10YHR200W NUP57P48837 541 aa12.94□□□□□ -0.34
RPN10YHR200W SNP1Q00916 300 aaPredicted RBP12.94□□□□□ -0.34
RPN10YHR200W SMA2Q04658 369 aa12.94□□□□□ -0.34
RPN10YHR200W SEN1Q00416 2231 aaKnown RBP12.94□□□□□ -0.34
RPN10YHR200W BUD5P25300 642 aaPredicted RBP12.93□□□□□ -0.34
RPN10YHR200W DCG1P32460 244 aa12.93□□□□□ -0.34
RPN10YHR200W AUR1P36107 401 aaPredicted RBP12.93□□□□□ -0.34
RPN10YHR200W EGD2P38879 174 aaKnown RBP12.93□□□□□ -0.34
RPN10YHR200W GIP2P40036 548 aa12.93□□□□□ -0.34
RPN10YHR200W TRM9P49957 279 aa12.93□□□□□ -0.34
RPN10YHR200W TPS1Q00764 495 aaKnown RBP12.93□□□□□ -0.34
RPN10YHR200W YSA1Q01976 231 aa12.93□□□□□ -0.34
RPN10YHR200W YOR365CQ08844 703 aa12.93□□□□□ -0.34
RPN10YHR200W MED11Q99278 115 aa12.93□□□□□ -0.34
RPN10YHR200W FES1P38260 290 aa12.92□□□□□ -0.34
RPN10YHR200W YBR138CP38277 524 aa12.92□□□□□ -0.34
RPN10YHR200W GOS1P38736 223 aa12.92□□□□□ -0.34
RPN10YHR200W ISC1P40015 477 aaKnown RBP12.92□□□□□ -0.34
RPN10YHR200W DUG1P43616 481 aaKnown RBP12.92□□□□□ -0.34
RPN10YHR200W SLD3P53135 668 aa12.92□□□□□ -0.34
RPN10YHR200W NRM1P53718 249 aa12.92□□□□□ -0.34
RPN10YHR200W MTQ1P53944 314 aa12.92□□□□□ -0.34
RPN10YHR200W YMR099CQ03161 297 aaKnown RBP12.92□□□□□ -0.34
RPN10YHR200W RSN1Q03516 953 aa12.92□□□□□ -0.34
RPN10YHR200W NFI1Q12216 726 aa12.92□□□□□ -0.34
RPN10YHR200W YOL163WP0CF20 169 aa12.91□□□□□ -0.34
RPN10YHR200W RHB1P25378 209 aa12.91□□□□□ -0.34
RPN10YHR200W GSH1P32477 678 aa12.91□□□□□ -0.34
RPN10YHR200W VPS52P39904 641 aa12.91□□□□□ -0.34
RPN10YHR200W FMP52P40008 231 aa12.91□□□□□ -0.34
RPN10YHR200W IES5P40060 125 aa12.91□□□□□ -0.34
RPN10YHR200W ASK10P48361 1146 aa12.91□□□□□ -0.34
RPN10YHR200W TLG1Q03322 224 aa12.91□□□□□ -0.34
RPN10YHR200W TPP1Q03796 238 aa12.91□□□□□ -0.34
RPN10YHR200W SMP3Q04174 516 aa12.91□□□□□ -0.34
RPN10YHR200W RNH202Q05635 350 aa12.91□□□□□ -0.34
RPN10YHR200W VPS36Q06696 566 aa12.91□□□□□ -0.34
RPN10YHR200W PIN2Q12057 282 aa12.91□□□□□ -0.34
RPN10YHR200W YLR126CQ12288 251 aa12.91□□□□□ -0.34
RPN10YHR200W TFS1P14306 219 aa12.9□□□□□ -0.34
RPN10YHR200W YCR006CP25350 157 aa12.9□□□□□ -0.34
RPN10YHR200W HIR2P32480 875 aa12.9□□□□□ -0.34
RPN10YHR200W YKR015CP36111 568 aa12.9□□□□□ -0.34
RPN10YHR200W CTF8P38877 133 aa12.9□□□□□ -0.34
RPN10YHR200W ALR2P43553 858 aa12.9□□□□□ -0.34
RPN10YHR200W ALB1P47019 175 aaPredicted RBP12.9□□□□□ -0.34
RPN10YHR200W RBL2P48606 106 aaKnown RBP12.9□□□□□ -0.34
RPN10YHR200W MON1P53129 644 aa12.9□□□□□ -0.34
RPN10YHR200W MPC1P53157 130 aaKnown RBP12.9□□□□□ -0.34
RPN10YHR200W URC2Q04411 772 aa12.9□□□□□ -0.34
RPN10YHR200W YOL036WQ08206 761 aa12.9□□□□□ -0.34
RPN10YHR200W RPS21BQ3E754 87 aaKnown RBP12.9□□□□□ -0.34
RPN10YHR200W PBN1P25580 416 aa12.89□□□□□ -0.35
RPN10YHR200W RPL5P26321 297 aaKnown RBP12.89□□□□□ -0.35
RPN10YHR200W RPS5P26783 225 aaKnown RBP12.89□□□□□ -0.35
RPN10YHR200W TOD6P34219 525 aa12.89□□□□□ -0.35
RPN10YHR200W RPS27AP35997 82 aaKnown RBP12.89□□□□□ -0.35
RPN10YHR200W EXO84P38261 753 aa12.89□□□□□ -0.35
RPN10YHR200W RPS27BP38711 82 aa12.89□□□□□ -0.35
RPN10YHR200W PRE6P40303 254 aaKnown RBP12.89□□□□□ -0.35
RPN10YHR200W ICE2P40499 491 aa12.89□□□□□ -0.35
RPN10YHR200W REX3Q12090 404 aa12.89□□□□□ -0.35
RPN10YHR200W IRA2P19158 3079 aa12.89□□□□□ -0.35
RPN10YHR200W GAL4P04386 881 aa12.88□□□□□ -0.35
RPN10YHR200W VMA6P32366 345 aaKnown RBP12.88□□□□□ -0.35
RPN10YHR200W PUP2P32379 260 aa12.88□□□□□ -0.35
RPN10YHR200W YPR174CQ06616 221 aaPredicted RBP12.88□□□□□ -0.35
RPN10YHR200W MOD5P07884 428 aa12.87□□□□□ -0.35
RPN10YHR200W MCK1P21965 375 aaKnown RBP12.87□□□□□ -0.35
RPN10YHR200W MKK2P32491 506 aa12.87□□□□□ -0.35
RPN10YHR200W PTR2P32901 601 aa12.87□□□□□ -0.35
RPN10YHR200W LST4P34239 828 aa12.87□□□□□ -0.35
RPN10YHR200W SWP82P43554 623 aa12.87□□□□□ -0.35
RPN10YHR200W CHA4P43634 648 aa12.87□□□□□ -0.35
RPN10YHR200W ABZ2Q03266 374 aa12.87□□□□□ -0.35
RPN10YHR200W YMD8Q03697 442 aa12.87□□□□□ -0.35
RPN10YHR200W YPL119C-AQ3E751 87 aa12.87□□□□□ -0.35
RPN10YHR200W RPP2BP02400 110 aaKnown RBP12.86□□□□□ -0.35
RPN10YHR200W AI4P03878 556 aa12.86□□□□□ -0.35
RPN10YHR200W CDC26P14724 124 aa12.86□□□□□ -0.35
RPN10YHR200W DAL82P21705 255 aa12.86□□□□□ -0.35
RPN10YHR200W ITR2P30606 609 aa12.86□□□□□ -0.35
RPN10YHR200W APE4P38821 490 aa12.86□□□□□ -0.35
RPN10YHR200W SOP4P39543 234 aaPredicted RBP12.86□□□□□ -0.35
RPN10YHR200W RRG9P40156 214 aa12.86□□□□□ -0.35
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms