RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	MMF1	P40185	145 aa	Known RBP	2.84	□□□□□ -1.95
SPO11	YHL022C	IGD1	P43598	195 aa		2.84	□□□□□ -1.95
SPO11	YHL022C	YPR091C	Q06833	770 aa		2.84	□□□□□ -1.95
SPO11	YHL022C	ALG1	P16661	449 aa		2.83	□□□□□ -1.96
SPO11	YHL022C	JNM1	P36224	373 aa		2.83	□□□□□ -1.96
SPO11	YHL022C	MRPL27	P36526	146 aa	Predicted RBP	2.83	□□□□□ -1.96
SPO11	YHL022C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	2.83	□□□□□ -1.96	not detected
SPO11	YHL022C	TOS2	P50078	622 aa		2.83	□□□□□ -1.96
SPO11	YHL022C	TPS1	Q00764	495 aa	Known RBP	2.83	□□□□□ -1.96
SPO11	YHL022C	SPR6	Q01684	191 aa		2.83	□□□□□ -1.96
SPO11	YHL022C	FCY22	Q12119	530 aa		2.83	□□□□□ -1.96
SPO11	YHL022C	CDC21	P06785	304 aa		2.82	□□□□□ -1.96
SPO11	YHL022C	RPC53	P25441	422 aa		2.82	□□□□□ -1.96
SPO11	YHL022C	OLA1	P38219	394 aa	Known RBP	2.82	□□□□□ -1.96
SPO11	YHL022C	INM1	P38710	295 aa		2.82	□□□□□ -1.96
SPO11	YHL022C	GPI16	P38875	610 aa		2.82	□□□□□ -1.96
SPO11	YHL022C	FLC3	P53121	802 aa		2.82	□□□□□ -1.96
SPO11	YHL022C	YGR117C	P53270	476 aa		2.82	□□□□□ -1.96
SPO11	YHL022C	AEP3	Q12089	606 aa		2.82	□□□□□ -1.96
SPO11	YHL022C	FOL3	Q12676	427 aa	Predicted RBP	2.82	□□□□□ -1.96
SPO11	YHL022C	PDX1	P16451	410 aa		2.81	□□□□□ -1.96
SPO11	YHL022C	RIM1	P32445	135 aa	Known RBP	2.81	□□□□□ -1.96
SPO11	YHL022C	ZIM17	P42844	174 aa		2.81	□□□□□ -1.96
SPO11	YHL022C	PIB2	P53191	635 aa		2.81	□□□□□ -1.96
SPO11	YHL022C	YDL114W	Q07530	308 aa		2.81	□□□□□ -1.96
SPO11	YHL022C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	2.8	□□□□□ -1.96	not detected
SPO11	YHL022C	COX13	P32799	129 aa		2.8	□□□□□ -1.96
SPO11	YHL022C	GPX2	P38143	162 aa		2.8	□□□□□ -1.96
SPO11	YHL022C	YIP5	P53108	310 aa		2.8	□□□□□ -1.96
SPO11	YHL022C	KTR6	P54070	446 aa		2.8	□□□□□ -1.96
SPO11	YHL022C	YLR345W	Q06137	509 aa		2.8	□□□□□ -1.96
SPO11	YHL022C	YLR456W	Q06199	204 aa		2.8	□□□□□ -1.96
SPO11	YHL022C	MCH1	Q07376	486 aa		2.8	□□□□□ -1.96
SPO11	YHL022C	YDL199C	Q12407	687 aa		2.8	□□□□□ -1.96
SPO11	YHL022C	HTZ1	Q12692	134 aa	Known RBP	2.8	□□□□□ -1.96
SPO11	YHL022C	OPI3	P05375	206 aa		2.79	□□□□□ -1.96
SPO11	YHL022C	CPR2	P23285	205 aa		2.79	□□□□□ -1.96
SPO11	YHL022C	FUN26	P31381	517 aa		2.79	□□□□□ -1.96
SPO11	YHL022C	DEP1	P31385	405 aa		2.79	□□□□□ -1.96
SPO11	YHL022C	HSP104	P31539	908 aa	Known RBP	2.79	□□□□□ -1.96
SPO11	YHL022C	RAD5	P32849	1169 aa	Predicted RBP	2.79	□□□□□ -1.96
SPO11	YHL022C	ECM8	P38246	354 aa		2.79	□□□□□ -1.96
SPO11	YHL022C	FAD1	P38913	306 aa		2.79	□□□□□ -1.96
SPO11	YHL022C	STE24	P47154	453 aa		2.79	□□□□□ -1.96
SPO11	YHL022C	ATP22	P50273	684 aa	Predicted RBP	2.79	□□□□□ -1.96
SPO11	YHL022C	YDR341C	Q05506	607 aa	Known RBP	2.79	□□□□□ -1.96
SPO11	YHL022C	RNH203	Q12338	110 aa		2.79	□□□□□ -1.96
SPO11	YHL022C	CMK2	P22517	447 aa		2.78	□□□□□ -1.96
SPO11	YHL022C	ECT1	P33412	323 aa		2.78	□□□□□ -1.96
SPO11	YHL022C	SKT5	P34226	696 aa		2.78	□□□□□ -1.96
SPO11	YHL022C	SEC9	P40357	651 aa		2.78	□□□□□ -1.96
SPO11	YHL022C	AIP1	P46680	615 aa	Known RBP	2.78	□□□□□ -1.96
SPO11	YHL022C	RRN9	P53437	365 aa		2.78	□□□□□ -1.96
SPO11	YHL022C	RMT2	Q03305	412 aa		2.78	□□□□□ -1.96
SPO11	YHL022C	YHC1	Q05900	231 aa	Known RBP	2.78	□□□□□ -1.96
SPO11	YHL022C	PIN3	Q06449	215 aa		2.78	□□□□□ -1.96
SPO11	YHL022C	ZUO1	P32527	433 aa	Known RBP	2.77	□□□□□ -1.97
SPO11	YHL022C	MCR1	P36060	302 aa	Known RBP	2.77	□□□□□ -1.97
SPO11	YHL022C	ATM1	P40416	690 aa		2.77	□□□□□ -1.97
SPO11	YHL022C	PMT5	P52867	743 aa		2.77	□□□□□ -1.97
SPO11	YHL022C	ECM7	Q06200	448 aa		2.77	□□□□□ -1.97
SPO11	YHL022C	UAF30	Q08747	228 aa		2.77	□□□□□ -1.97
SPO11	YHL022C	MCT1	Q12283	360 aa		2.77	□□□□□ -1.97
SPO11	YHL022C	YOP1	Q12402	180 aa		2.77	□□□□□ -1.97
SPO11	YHL022C	PRM7	Q12459	698 aa		2.77	□□□□□ -1.97
SPO11	YHL022C	RAX2	Q12465	1220 aa		2.77	□□□□□ -1.97
SPO11	YHL022C	TIR2	P33890	251 aa		2.76	□□□□□ -1.97
SPO11	YHL022C	DTR1	P38125	572 aa		2.76	□□□□□ -1.97
SPO11	YHL022C	QDR3	P38227	689 aa		2.76	□□□□□ -1.97
SPO11	YHL022C	BMT2	P38278	337 aa		2.76	□□□□□ -1.97
SPO11	YHL022C	GEP4	P38812	185 aa		2.76	□□□□□ -1.97
SPO11	YHL022C	HEM14	P40012	539 aa		2.76	□□□□□ -1.97
SPO11	YHL022C	YFL012W	P43580	148 aa		2.76	□□□□□ -1.97
SPO11	YHL022C	ABM1	P47146	123 aa		2.76	□□□□□ -1.97
SPO11	YHL022C	TRM112	P53738	135 aa	Predicted RBP	2.76	□□□□□ -1.97
SPO11	YHL022C	ENT5	Q03769	411 aa	Known RBP	2.76	□□□□□ -1.97
SPO11	YHL022C	TPK3	P05986	398 aa		2.75	□□□□□ -1.97
SPO11	YHL022C	STE7	P06784	515 aa		2.75	□□□□□ -1.97
SPO11	YHL022C	SLM5	P25345	492 aa	Known RBP	2.75	□□□□□ -1.97
SPO11	YHL022C	SPO23	P33757	523 aa		2.75	□□□□□ -1.97
SPO11	YHL022C	PFF1	P38244	976 aa		2.75	□□□□□ -1.97
SPO11	YHL022C	WSC4	P38739	605 aa		2.75	□□□□□ -1.97
SPO11	YHL022C	YER184C	P39961	794 aa		2.75	□□□□□ -1.97
SPO11	YHL022C	KEG1	P43614	200 aa		2.75	□□□□□ -1.97
SPO11	YHL022C	ROG1	P53118	685 aa		2.75	□□□□□ -1.97
SPO11	YHL022C	VHT1	P53241	593 aa		2.75	□□□□□ -1.97
SPO11	YHL022C	YGR111W	P53265	400 aa		2.75	□□□□□ -1.97
SPO11	YHL022C	RPL21A	Q02753	160 aa	Known RBP	2.75	□□□□□ -1.97
SPO11	YHL022C	YPL107W	Q02873	248 aa		2.75	□□□□□ -1.97
SPO11	YHL022C	NSE1	Q07913	336 aa		2.75	□□□□□ -1.97
SPO11	YHL022C	RPL21B	Q12672	160 aa	Known RBP	2.75	□□□□□ -1.97
SPO11	YHL022C	RPL12A	P0CX53	165 aa	Known RBP	2.74	□□□□□ -1.97
SPO11	YHL022C	RPL12B	P0CX54	165 aa		2.74	□□□□□ -1.97
SPO11	YHL022C	PUT4	P15380	627 aa		2.74	□□□□□ -1.97
SPO11	YHL022C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	2.74	□□□□□ -1.97	not detected
SPO11	YHL022C	GIT1	P25346	518 aa		2.74	□□□□□ -1.97
SPO11	YHL022C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	2.74	□□□□□ -1.97	not detected
SPO11	YHL022C	TOA2	P32774	122 aa		2.74	□□□□□ -1.97
SPO11	YHL022C	YSC83	P32792	385 aa		2.74	□□□□□ -1.97
SPO11	YHL022C	LSM12	P38828	187 aa	Known RBP	2.74	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 19 ms