RNA–Protein interactions for RNA: YDR085C

AFR1, Transcript of Protein required for pheromone-induced projection (shmoo) formation, yeastyeast

Gene AFR1, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFR1YDR085C ALF1P53904 254 aa2.35□□□□□ -2.03
AFR1YDR085C UAF30Q08747 228 aa2.35□□□□□ -2.03
AFR1YDR085C PAB1P04147 577 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
AFR1YDR085C CBP6P07253 162 aaPredicted RBP2.34□□□□□ -2.03
AFR1YDR085C PRB1P09232 635 aa2.34□□□□□ -2.03
AFR1YDR085C MRPS9P38120 278 aa2.34□□□□□ -2.03
AFR1YDR085C YNL208WP40159 199 aaKnown RBP2.34□□□□□ -2.03
AFR1YDR085C MKC7P53379 596 aa2.34□□□□□ -2.03
AFR1YDR085C SPR6Q01684 191 aa2.34□□□□□ -2.03
AFR1YDR085C SKI8Q02793 397 aaPredicted RBP2.34□□□□□ -2.03
AFR1YDR085C YLR456WQ06199 204 aa2.34□□□□□ -2.03
AFR1YDR085C YPR091CQ06833 770 aa2.34□□□□□ -2.03
AFR1YDR085C YPQ1Q12010 308 aa2.34□□□□□ -2.03
AFR1YDR085C ADH1P00330 348 aaKnown RBP2.33□□□□□ -2.04
AFR1YDR085C GPI16P38875 610 aa2.33□□□□□ -2.04
AFR1YDR085C STE24P47154 453 aa2.33□□□□□ -2.04
AFR1YDR085C TOS2P50078 622 aa2.33□□□□□ -2.04
AFR1YDR085C YPS5P53057 165 aa2.33□□□□□ -2.04
AFR1YDR085C PIB2P53191 635 aa2.33□□□□□ -2.04
AFR1YDR085C AIM32Q04689 311 aa2.33□□□□□ -2.04
AFR1YDR085C FCY22Q12119 530 aa2.33□□□□□ -2.04
AFR1YDR085C COX13P32799 129 aa2.33□□□□□ -2.04
AFR1YDR085C SKT5P34226 696 aa2.33□□□□□ -2.04
AFR1YDR085C GPI18P38211 433 aa2.33□□□□□ -2.04
AFR1YDR085C FAD1P38913 306 aa2.33□□□□□ -2.04
AFR1YDR085C TIM17P39515 158 aa2.33□□□□□ -2.04
AFR1YDR085C YGR111WP53265 400 aa2.33□□□□□ -2.04
AFR1YDR085C ECM11Q04110 302 aa2.33□□□□□ -2.04
AFR1YDR085C YDL114WQ07530 308 aa2.33□□□□□ -2.04
AFR1YDR085C RNH203Q12338 110 aa2.33□□□□□ -2.04
AFR1YDR085C MDH1P17505 334 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
AFR1YDR085C ZRC1P20107 442 aa2.32□□□□□ -2.04
AFR1YDR085C RAD5P32849 1169 aaPredicted RBP2.32□□□□□ -2.04
AFR1YDR085C GPX2P38143 162 aa2.32□□□□□ -2.04
AFR1YDR085C NSE1Q07913 336 aa2.32□□□□□ -2.04
AFR1YDR085C ISA2Q12425 185 aa2.32□□□□□ -2.04
AFR1YDR085C FUN26P31381 517 aa2.31□□□□□ -2.04
AFR1YDR085C DBF4P32325 704 aa2.31□□□□□ -2.04
AFR1YDR085C MCR1P36060 302 aaKnown RBP2.31□□□□□ -2.04
AFR1YDR085C RRN9P53437 365 aa2.31□□□□□ -2.04
AFR1YDR085C PFS1P38872 237 aa2.31□□□□□ -2.04
AFR1YDR085C IGD1P43598 195 aa2.31□□□□□ -2.04
AFR1YDR085C YGL262WP53054 175 aa2.31□□□□□ -2.04
AFR1YDR085C TPS1Q00764 495 aaKnown RBP2.31□□□□□ -2.04
AFR1YDR085C PRP3Q03338 469 aaPredicted RBP2.31□□□□□ -2.04
AFR1YDR085C YOP1Q12402 180 aa2.31□□□□□ -2.04
AFR1YDR085C YDL199CQ12407 687 aa2.31□□□□□ -2.04
AFR1YDR085C HTZ1Q12692 134 aaKnown RBP2.31□□□□□ -2.04
AFR1YDR085C OPI3P05375 206 aa2.3□□□□□ -2.04
AFR1YDR085C RPL12AP0CX53 165 aaKnown RBP2.3□□□□□ -2.04
AFR1YDR085C RPL12BP0CX54 165 aa2.3□□□□□ -2.04
AFR1YDR085C DEP1P31385 405 aa2.3□□□□□ -2.04
AFR1YDR085C MRPL27P36526 146 aaPredicted RBP2.3□□□□□ -2.04
AFR1YDR085C QDR3P38227 689 aa2.3□□□□□ -2.04
AFR1YDR085C ATM1P40416 690 aa2.3□□□□□ -2.04
AFR1YDR085C PMT5P52867 743 aa2.3□□□□□ -2.04
AFR1YDR085C ECM7Q06200 448 aa2.3□□□□□ -2.04
AFR1YDR085C DCI1Q08558 271 aa2.3□□□□□ -2.04
AFR1YDR085C IES4Q08561 116 aa2.3□□□□□ -2.04
AFR1YDR085C FOL3Q12676 427 aaPredicted RBP2.3□□□□□ -2.04
AFR1YDR085C NRP1P32770 719 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
AFR1YDR085C LTV1P34078 463 aa2.29□□□□□ -2.04
AFR1YDR085C SLX1P38324 304 aa2.29□□□□□ -2.04
AFR1YDR085C SLM5P25345 492 aaKnown RBP2.28□□□□□ -2.04
AFR1YDR085C PHO91P27514 894 aa2.28□□□□□ -2.04
AFR1YDR085C TOA2P32774 122 aa2.28□□□□□ -2.04
AFR1YDR085C YSC83P32792 385 aa2.28□□□□□ -2.04
AFR1YDR085C TIR2P33890 251 aa2.28□□□□□ -2.04
AFR1YDR085C ROG1P53118 685 aa2.28□□□□□ -2.04
AFR1YDR085C TRM112P53738 135 aaPredicted RBP2.28□□□□□ -2.04
AFR1YDR085C KTR6P54070 446 aa2.28□□□□□ -2.04
AFR1YDR085C URC2Q04411 772 aa2.28□□□□□ -2.04
AFR1YDR085C MCT1Q12283 360 aa2.28□□□□□ -2.04
AFR1YDR085C TPK3P05986 398 aa2.28□□□□□ -2.04
AFR1YDR085C ECT1P33412 323 aa2.28□□□□□ -2.04
AFR1YDR085C ECM8P38246 354 aa2.28□□□□□ -2.04
AFR1YDR085C GEP4P38812 185 aa2.28□□□□□ -2.04
AFR1YDR085C KEG1P43614 200 aa2.28□□□□□ -2.04
AFR1YDR085C AIP1P46680 615 aaKnown RBP2.28□□□□□ -2.04
AFR1YDR085C ABM1P47146 123 aa2.28□□□□□ -2.04
AFR1YDR085C FLC3P53121 802 aa2.28□□□□□ -2.04
AFR1YDR085C YHC1Q05900 231 aaKnown RBP2.28□□□□□ -2.04
AFR1YDR085C GPM3Q12326 303 aa2.28□□□□□ -2.04
AFR1YDR085C ARF1P11076 181 aaKnown RBP2.27□□□□□ -2.05
AFR1YDR085C DPH2P32461 534 aa2.27□□□□□ -2.05
AFR1YDR085C SPO23P33757 523 aa2.27□□□□□ -2.05
AFR1YDR085C DOA1P36037 715 aa2.27□□□□□ -2.05
AFR1YDR085C PAC11P40960 533 aa2.27□□□□□ -2.05
AFR1YDR085C YIP5P53108 310 aa2.27□□□□□ -2.05
AFR1YDR085C VHT1P53241 593 aa2.27□□□□□ -2.05
AFR1YDR085C PIN3Q06449 215 aa2.27□□□□□ -2.05
AFR1YDR085C NDL1Q06568 189 aa2.27□□□□□ -2.05
AFR1YDR085C PCL9Q12477 304 aa2.27□□□□□ -2.05
AFR1YDR085C GIT1P25346 518 aa2.26□□□□□ -2.05
AFR1YDR085C ASA1Q06822 443 aa2.26□□□□□ -2.05
AFR1YDR085C PDE2P06776 526 aa2.26□□□□□ -2.05
AFR1YDR085C STE7P06784 515 aa2.26□□□□□ -2.05
AFR1YDR085C CMK2P22517 447 aa2.26□□□□□ -2.05
AFR1YDR085C LSM12P38828 187 aaKnown RBP2.26□□□□□ -2.05
AFR1YDR085C BUD27P43573 796 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms