RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeastyeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK1YDR006C HEM15P16622 393 aa2.7□□□□□ -1.98
SOK1YDR006C PMI40P29952 429 aaKnown RBP2.7□□□□□ -1.98
SOK1YDR006C NUF2P33895 451 aa2.7□□□□□ -1.98
SOK1YDR006C FLO10P36170 1169 aa2.7□□□□□ -1.98
SOK1YDR006C RFT1P38206 574 aaPredicted RBP2.7□□□□□ -1.98
SOK1YDR006C TCM62P38228 572 aaKnown RBP2.7□□□□□ -1.98
SOK1YDR006C UIP3P39547 235 aa2.7□□□□□ -1.98
SOK1YDR006C YGR210CP42942 411 aa2.7□□□□□ -1.98
SOK1YDR006C VOA1P53262 265 aa2.7□□□□□ -1.98
SOK1YDR006C DIP5P53388 608 aa2.7□□□□□ -1.98
SOK1YDR006C SPP2Q02521 185 aa2.7□□□□□ -1.98
SOK1YDR006C MUK1Q02866 612 aa2.7□□□□□ -1.98
SOK1YDR006C YMR209CQ03648 457 aa2.7□□□□□ -1.98
SOK1YDR006C CDD1Q06549 142 aa2.7□□□□□ -1.98
SOK1YDR006C DIS3Q08162 1001 aaKnown RBP2.7□□□□□ -1.98
SOK1YDR006C LCB4Q12246 624 aa2.7□□□□□ -1.98
SOK1YDR006C LAM4P38800 1345 aa2.69□□□□□ -1.98
SOK1YDR006C COX1P00401 534 aa2.69□□□□□ -1.98
SOK1YDR006C DEG1P31115 442 aaKnown RBP2.69□□□□□ -1.98
SOK1YDR006C PDR3P33200 976 aa2.69□□□□□ -1.98
SOK1YDR006C SOR1P35497 357 aaKnown RBP2.69□□□□□ -1.98
SOK1YDR006C AME1P38313 324 aa2.69□□□□□ -1.98
SOK1YDR006C SMB1P40018 196 aaKnown RBP2.69□□□□□ -1.98
SOK1YDR006C SIM1P40472 476 aa2.69□□□□□ -1.98
SOK1YDR006C SAS2P40963 338 aa2.69□□□□□ -1.98
SOK1YDR006C SLX9P53251 210 aaPredicted RBP2.69□□□□□ -1.98
SOK1YDR006C SYF2P53277 215 aaPredicted RBP2.69□□□□□ -1.98
SOK1YDR006C RCF2P53721 224 aa2.69□□□□□ -1.98
SOK1YDR006C ADE16P54113 591 aaKnown RBP2.69□□□□□ -1.98
SOK1YDR006C SOR2Q07786 357 aa2.69□□□□□ -1.98
SOK1YDR006C PAM18Q07914 168 aa2.69□□□□□ -1.98
SOK1YDR006C LSP1Q12230 341 aaKnown RBP2.69□□□□□ -1.98
SOK1YDR006C YLR108CQ12259 485 aa2.69□□□□□ -1.98
SOK1YDR006C AI5_ALPHAQ9ZZX1 630 aa2.69□□□□□ -1.98
SOK1YDR006C SSK22P25390 1331 aaPredicted RBP2.69□□□□□ -1.98
SOK1YDR006C TEF1P02994 458 aaKnown RBP2.69□□□□□ -1.98
SOK1YDR006C CHO2P05374 869 aaKnown RBP2.69□□□□□ -1.98
SOK1YDR006C NAM2P11325 894 aa2.69□□□□□ -1.98
SOK1YDR006C ATP10P18496 279 aa2.69□□□□□ -1.98
SOK1YDR006C CKI1P20485 582 aa2.69□□□□□ -1.98
SOK1YDR006C MXR2P25566 168 aa2.69□□□□□ -1.98
SOK1YDR006C FUB1P25659 250 aa2.69□□□□□ -1.98
SOK1YDR006C RIM1P32445 135 aaKnown RBP2.69□□□□□ -1.98
SOK1YDR006C GCD7P32502 381 aaPredicted RBP2.69□□□□□ -1.98
SOK1YDR006C KTR3P38130 404 aaPredicted RBP2.69□□□□□ -1.98
SOK1YDR006C OLA1P38219 394 aaKnown RBP2.69□□□□□ -1.98
SOK1YDR006C TRS20P38334 175 aa2.69□□□□□ -1.98
SOK1YDR006C RCK2P38623 610 aa2.69□□□□□ -1.98
SOK1YDR006C LEU5P38702 357 aa2.69□□□□□ -1.98
SOK1YDR006C YMR134WP40207 237 aa2.69□□□□□ -1.98
SOK1YDR006C YFL015CP43578 164 aa2.69□□□□□ -1.98
SOK1YDR006C AMA1P50082 593 aa2.69□□□□□ -1.98
SOK1YDR006C GND2P53319 492 aa2.69□□□□□ -1.98
SOK1YDR006C YNR066CP53752 436 aa2.69□□□□□ -1.98
SOK1YDR006C YNL260CP53846 198 aa2.69□□□□□ -1.98
SOK1YDR006C VBA1Q04301 562 aa2.69□□□□□ -1.98
SOK1YDR006C SPC24Q04477 213 aa2.69□□□□□ -1.98
SOK1YDR006C GFD1Q04839 188 aaKnown RBP2.69□□□□□ -1.98
SOK1YDR006C MRPL51Q06090 140 aaPredicted RBP2.69□□□□□ -1.98
SOK1YDR006C SEC10Q06245 871 aa2.69□□□□□ -1.98
SOK1YDR006C GPN3Q06543 272 aa2.69□□□□□ -1.98
SOK1YDR006C YDR061WQ12298 539 aa2.69□□□□□ -1.98
SOK1YDR006C MED4Q12343 284 aa2.69□□□□□ -1.98
SOK1YDR006C SEY1Q99287 776 aa2.69□□□□□ -1.98
SOK1YDR006C ATP6P00854 259 aa2.68□□□□□ -1.98
SOK1YDR006C HEM1P09950 548 aaPredicted RBP2.68□□□□□ -1.98
SOK1YDR006C IMA3P0CW40 589 aa2.68□□□□□ -1.98
SOK1YDR006C IMA4P0CW41 589 aa2.68□□□□□ -1.98
SOK1YDR006C CTR86P25355 563 aa2.68□□□□□ -1.98
SOK1YDR006C BMH1P29311 267 aaKnown RBP2.68□□□□□ -1.98
SOK1YDR006C CBT1P36038 271 aaPredicted RBP2.68□□□□□ -1.98
SOK1YDR006C HMT1P38074 348 aa2.68□□□□□ -1.98
SOK1YDR006C MRX3P38172 270 aa2.68□□□□□ -1.98
SOK1YDR006C FMP52P40008 231 aa2.68□□□□□ -1.98
SOK1YDR006C IRC8P47046 822 aa2.68□□□□□ -1.98
SOK1YDR006C ASN2P49090 572 aaKnown RBP2.68□□□□□ -1.98
SOK1YDR006C MSO1P53604 210 aaKnown RBP2.68□□□□□ -1.98
SOK1YDR006C BUD17P53727 317 aa2.68□□□□□ -1.98
SOK1YDR006C YDR541CQ03049 344 aa2.68□□□□□ -1.98
SOK1YDR006C NUP53Q03790 475 aa2.68□□□□□ -1.98
SOK1YDR006C MSS11Q03825 758 aa2.68□□□□□ -1.98
SOK1YDR006C BUR2Q05949 395 aa2.68□□□□□ -1.98
SOK1YDR006C IMA2Q08295 589 aa2.68□□□□□ -1.98
SOK1YDR006C DNL4Q08387 944 aaPredicted RBP2.68□□□□□ -1.98
SOK1YDR006C ALE1Q08548 619 aa2.68□□□□□ -1.98
SOK1YDR006C PNS1Q12412 539 aa2.68□□□□□ -1.98
SOK1YDR006C YLR278CQ05854 1341 aa2.68□□□□□ -1.98
SOK1YDR006C PAB1P04147 577 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
SOK1YDR006C KSS1P14681 368 aa2.68□□□□□ -1.98
SOK1YDR006C EXO70P19658 623 aa2.68□□□□□ -1.98
SOK1YDR006C OSM1P21375 501 aaKnown RBP2.68□□□□□ -1.98
SOK1YDR006C ERG4P25340 473 aa2.68□□□□□ -1.98
SOK1YDR006C YCR102CP25608 368 aa2.68□□□□□ -1.98
SOK1YDR006C ELM1P32801 640 aa2.68□□□□□ -1.98
SOK1YDR006C VAM7P32912 316 aa2.68□□□□□ -1.98
SOK1YDR006C SGE1P33335 543 aa2.68□□□□□ -1.98
SOK1YDR006C PAD1P33751 242 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
SOK1YDR006C CLG1P35190 452 aa2.68□□□□□ -1.98
SOK1YDR006C RIB5P38145 238 aa2.68□□□□□ -1.98
SOK1YDR006C GAB1P41733 394 aa2.68□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms