RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTP1	YDL230W	RCN2	Q12044	265 aa		11.58	□□□□□ -0.56
PTP1	YDL230W	MDM35	O60200	86 aa		11.57	□□□□□ -0.56
PTP1	YDL230W	CMK1	P27466	446 aa	Known RBP	11.57	□□□□□ -0.56
PTP1	YDL230W	PRP19	P32523	503 aa	Known RBP	11.57	□□□□□ -0.56
PTP1	YDL230W	SRL3	P36167	246 aa		11.57	□□□□□ -0.56
PTP1	YDL230W	GPX2	P38143	162 aa		11.57	□□□□□ -0.56
PTP1	YDL230W	RCY1	P39531	840 aa		11.57	□□□□□ -0.56
PTP1	YDL230W	DDI1	P40087	428 aa		11.57	□□□□□ -0.56
PTP1	YDL230W	QRI7	P43122	407 aa		11.57	□□□□□ -0.56
PTP1	YDL230W	YJL049W	P47048	450 aa		11.57	□□□□□ -0.56
PTP1	YDL230W	UBC9	P50623	157 aa	Predicted RBP	11.57	□□□□□ -0.56
PTP1	YDL230W	MEP3	P53390	489 aa		11.57	□□□□□ -0.56
PTP1	YDL230W	CPR8	P53728	308 aa		11.57	□□□□□ -0.56
PTP1	YDL230W	SNZ1	Q03148	297 aa		11.57	□□□□□ -0.56
PTP1	YDL230W	RTT10	Q08924	1013 aa		11.57	□□□□□ -0.56
PTP1	YDL230W	VPS33	P20795	691 aa		11.56	□□□□□ -0.56
PTP1	YDL230W	PPH21	P23594	369 aa		11.56	□□□□□ -0.56
PTP1	YDL230W	NDC1	P32500	655 aa		11.56	□□□□□ -0.56
PTP1	YDL230W	TCD2	P36101	447 aa	Known RBP	11.56	□□□□□ -0.56
PTP1	YDL230W	YKR023W	P36119	530 aa	Known RBP	11.56	□□□□□ -0.56
PTP1	YDL230W	BAP2	P38084	609 aa		11.56	□□□□□ -0.56
PTP1	YDL230W	YIL108W	P40483	696 aa	Known RBP	11.56	□□□□□ -0.56
PTP1	YDL230W	RPL10	P41805	221 aa	Known RBP	11.56	□□□□□ -0.56
PTP1	YDL230W	IMD3	P50095	523 aa	Known RBP	11.56	□□□□□ -0.56
PTP1	YDL230W	SCW11	P53189	542 aa		11.56	□□□□□ -0.56
PTP1	YDL230W	RSF1	Q05043	376 aa		11.56	□□□□□ -0.56
PTP1	YDL230W	BRE4	Q07660	1125 aa		11.56	□□□□□ -0.56
PTP1	YDL230W	SRO7	Q12038	1033 aa		11.56	□□□□□ -0.56
PTP1	YDL230W	PUS9	Q12069	462 aa		11.56	□□□□□ -0.56
PTP1	YDL230W	ACF2	Q12168	779 aa		11.56	□□□□□ -0.56
PTP1	YDL230W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	11.55	□□□□□ -0.56	not detected
PTP1	YDL230W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	11.55	□□□□□ -0.56	not detected
PTP1	YDL230W	DHR2	P36009	735 aa	Predicted RBP	11.55	□□□□□ -0.56
PTP1	YDL230W	FMP46	P36141	133 aa	Known RBP	11.55	□□□□□ -0.56
PTP1	YDL230W	PIM1	P36775	1133 aa		11.55	□□□□□ -0.56
PTP1	YDL230W	TIF34	P40217	347 aa	Known RBP	11.55	□□□□□ -0.56
PTP1	YDL230W	HPF1	Q05164	967 aa		11.55	□□□□□ -0.56
PTP1	YDL230W	MMT2	Q08970	484 aa		11.55	□□□□□ -0.56
PTP1	YDL230W	BMT6	Q12291	365 aa		11.55	□□□□□ -0.56
PTP1	YDL230W	TRM1	P15565	570 aa	Known RBP	11.54	□□□□□ -0.56
PTP1	YDL230W	NPR1	P22211	790 aa		11.54	□□□□□ -0.56
PTP1	YDL230W	SLY41	P22215	453 aa		11.54	□□□□□ -0.56
PTP1	YDL230W	ARE1	P25628	610 aa		11.54	□□□□□ -0.56
PTP1	YDL230W	SUI1	P32911	108 aa	Known RBP	11.54	□□□□□ -0.56
PTP1	YDL230W	SEC61	P32915	480 aa		11.54	□□□□□ -0.56
PTP1	YDL230W	ZRG8	P40021	1076 aa		11.54	□□□□□ -0.56
PTP1	YDL230W	PCL6	P40038	420 aa		11.54	□□□□□ -0.56
PTP1	YDL230W	HOC1	P47124	396 aa		11.54	□□□□□ -0.56
PTP1	YDL230W	YSA1	Q01976	231 aa		11.54	□□□□□ -0.56
PTP1	YDL230W	CTL1	Q03220	320 aa	Known RBP	11.54	□□□□□ -0.56
PTP1	YDL230W	ABZ2	Q03266	374 aa		11.54	□□□□□ -0.56
PTP1	YDL230W	YLR446W	Q06204	433 aa		11.54	□□□□□ -0.56
PTP1	YDL230W	CDC31	P06704	161 aa	Known RBP	11.53	□□□□□ -0.56
PTP1	YDL230W	MOD5	P07884	428 aa		11.53	□□□□□ -0.56
PTP1	YDL230W	FUR1	P18562	216 aa	Known RBP	11.53	□□□□□ -0.56
PTP1	YDL230W	BUD23	P25627	275 aa	Predicted RBP	11.53	□□□□□ -0.56
PTP1	YDL230W	BUB3	P26449	341 aa		11.53	□□□□□ -0.56
PTP1	YDL230W	SFA1	P32771	386 aa		11.53	□□□□□ -0.56
PTP1	YDL230W	DOA1	P36037	715 aa		11.53	□□□□□ -0.56
PTP1	YDL230W	OMA1	P36163	345 aa		11.53	□□□□□ -0.56
PTP1	YDL230W	SRO77	P38163	1010 aa		11.53	□□□□□ -0.56
PTP1	YDL230W	FMP23	P38231	175 aa		11.53	□□□□□ -0.56
PTP1	YDL230W	EHT1	P38295	451 aa		11.53	□□□□□ -0.56
PTP1	YDL230W	MDM31	P38880	579 aa		11.53	□□□□□ -0.56
PTP1	YDL230W	LYS1	P38998	373 aa	RIP-Chip data	11.53	□□□□□ -0.56	not detected
PTP1	YDL230W	AIM10	P39965	576 aa	Known RBP	11.53	□□□□□ -0.56
PTP1	YDL230W	IMD4	P50094	524 aa	Known RBP	11.53	□□□□□ -0.56
PTP1	YDL230W	MNN10	P50108	393 aa	Known RBP	11.53	□□□□□ -0.56
PTP1	YDL230W	VPS73	P53142	486 aa	Known RBP	11.53	□□□□□ -0.56
PTP1	YDL230W	DBP6	P53734	629 aa	Known RBP	11.53	□□□□□ -0.56
PTP1	YDL230W	FIN1	Q03898	291 aa		11.53	□□□□□ -0.56
PTP1	YDL230W	CDA2	Q06703	312 aa		11.53	□□□□□ -0.56
PTP1	YDL230W	XYL2	Q07993	356 aa		11.53	□□□□□ -0.56
PTP1	YDL230W	DAP1	Q12091	152 aa		11.53	□□□□□ -0.56
PTP1	YDL230W	CAR2	P07991	424 aa	Known RBP	11.52	□□□□□ -0.57
PTP1	YDL230W	ARC19	P33204	171 aa	Known RBP	11.52	□□□□□ -0.57
PTP1	YDL230W	YHR112C	P38716	378 aa		11.52	□□□□□ -0.57
PTP1	YDL230W	YHK8	P38776	514 aa		11.52	□□□□□ -0.57
PTP1	YDL230W	YAL037W	P39728	267 aa		11.52	□□□□□ -0.57
PTP1	YDL230W	BPL1	P48445	690 aa	Predicted RBP	11.52	□□□□□ -0.57
PTP1	YDL230W	NUP57	P48837	541 aa		11.52	□□□□□ -0.57
PTP1	YDL230W	MPC1	P53157	130 aa	Known RBP	11.52	□□□□□ -0.57
PTP1	YDL230W	CWC24	P53769	259 aa		11.52	□□□□□ -0.57
PTP1	YDL230W	RHO3	Q00245	231 aa	Known RBP	11.52	□□□□□ -0.57
PTP1	YDL230W	REC102	Q02721	264 aa		11.52	□□□□□ -0.57
PTP1	YDL230W	YMR087W	Q04299	284 aa		11.52	□□□□□ -0.57
PTP1	YDL230W	ISR1	Q06098	443 aa	Known RBP	11.52	□□□□□ -0.57
PTP1	YDL230W	SKI7	Q08491	747 aa	Predicted RBP	11.52	□□□□□ -0.57
PTP1	YDL230W	MMP1	Q12372	583 aa		11.52	□□□□□ -0.57
PTP1	YDL230W	GAL7	P08431	366 aa		11.51	□□□□□ -0.57
PTP1	YDL230W	MGR1	P25573	417 aa		11.51	□□□□□ -0.57
PTP1	YDL230W	YJU2	P28320	278 aa	Predicted RBP	11.51	□□□□□ -0.57
PTP1	YDL230W	AUR1	P36107	401 aa	Predicted RBP	11.51	□□□□□ -0.57
PTP1	YDL230W	PFS1	P38872	237 aa		11.51	□□□□□ -0.57
PTP1	YDL230W	BAT1	P38891	393 aa	Known RBP	11.51	□□□□□ -0.57
PTP1	YDL230W	CEM1	P39525	442 aa		11.51	□□□□□ -0.57
PTP1	YDL230W	MIT1	P40002	666 aa		11.51	□□□□□ -0.57
PTP1	YDL230W	FCY21	P40039	528 aa		11.51	□□□□□ -0.57
PTP1	YDL230W	LRO1	P40345	661 aa		11.51	□□□□□ -0.57
PTP1	YDL230W	FAA4	P47912	694 aa	Known RBP	11.51	□□□□□ -0.57

Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms