RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeast

Gene SLX1, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX1	YBR228W	CDC123	Q05791	360 aa		4.03	□□□□□ -1.76
SLX1	YBR228W	GRC3	Q07845	632 aa		4.03	□□□□□ -1.76
SLX1	YBR228W	PUT2	P07275	575 aa		4.02	□□□□□ -1.77
SLX1	YBR228W	SRV2	P17555	526 aa	Known RBP	4.02	□□□□□ -1.77
SLX1	YBR228W	DBF20	P32328	564 aa		4.02	□□□□□ -1.77
SLX1	YBR228W	AEP1	P32493	518 aa		4.02	□□□□□ -1.77
SLX1	YBR228W	CYM1	P32898	989 aa		4.02	□□□□□ -1.77
SLX1	YBR228W	SIP2	P34164	415 aa	Known RBP	4.02	□□□□□ -1.77
SLX1	YBR228W	MRPL4	P36517	319 aa		4.02	□□□□□ -1.77
SLX1	YBR228W	MRP21	P38175	177 aa		4.02	□□□□□ -1.77
SLX1	YBR228W	TSC10	P38342	320 aa		4.02	□□□□□ -1.77
SLX1	YBR228W	YHI9	P38765	294 aa		4.02	□□□□□ -1.77
SLX1	YBR228W	SEO1	P39709	593 aa		4.02	□□□□□ -1.77
SLX1	YBR228W	PYK2	P52489	506 aa	Known RBP	4.02	□□□□□ -1.77
SLX1	YBR228W	FLC3	P53121	802 aa		4.02	□□□□□ -1.77
SLX1	YBR228W	BUD32	P53323	261 aa		4.02	□□□□□ -1.77
SLX1	YBR228W	BIO4	P53630	237 aa		4.02	□□□□□ -1.77
SLX1	YBR228W	PRM1	P53835	661 aa		4.02	□□□□□ -1.77
SLX1	YBR228W	EFM6	P53970	246 aa		4.02	□□□□□ -1.77
SLX1	YBR228W	ADD37	Q03233	198 aa		4.02	□□□□□ -1.77
SLX1	YBR228W	FAR8	Q05040	523 aa		4.02	□□□□□ -1.77
SLX1	YBR228W	YPR114W	Q06107	315 aa		4.02	□□□□□ -1.77
SLX1	YBR228W	TRM8	Q12009	286 aa		4.02	□□□□□ -1.77
SLX1	YBR228W	YLR053C	Q12026	108 aa		4.02	□□□□□ -1.77
SLX1	YBR228W	PER33	Q12144	273 aa		4.02	□□□□□ -1.77
SLX1	YBR228W	NCA2	Q12374	616 aa		4.02	□□□□□ -1.77
SLX1	YBR228W	NUM1	Q00402	2748 aa		4.02	□□□□□ -1.77
SLX1	YBR228W	STT4	P37297	1900 aa		4.01	□□□□□ -1.77
SLX1	YBR228W	FMP27	Q06179	2628 aa		4.01	□□□□□ -1.77
SLX1	YBR228W	SEC63	P14906	663 aa		4.01	□□□□□ -1.77
SLX1	YBR228W	FPR1	P20081	114 aa	Known RBP	4.01	□□□□□ -1.77
SLX1	YBR228W	SEC14	P24280	304 aa	Known RBP	4.01	□□□□□ -1.77
SLX1	YBR228W	MNE1	P24720	663 aa		4.01	□□□□□ -1.77
SLX1	YBR228W	BEM1	P29366	551 aa		4.01	□□□□□ -1.77
SLX1	YBR228W	RIM1	P32445	135 aa	Known RBP	4.01	□□□□□ -1.77
SLX1	YBR228W	IMP3	P32899	183 aa	Predicted RBP	4.01	□□□□□ -1.77
SLX1	YBR228W	PXA2	P34230	853 aa		4.01	□□□□□ -1.77
SLX1	YBR228W	YBR032W	P38223	100 aa		4.01	□□□□□ -1.77
SLX1	YBR228W	MTC4	P38335	694 aa	Known RBP	4.01	□□□□□ -1.77
SLX1	YBR228W	DSN1	P40568	576 aa		4.01	□□□□□ -1.77
SLX1	YBR228W	TRS85	P46944	698 aa		4.01	□□□□□ -1.77
SLX1	YBR228W	SIP4	P46954	829 aa		4.01	□□□□□ -1.77
SLX1	YBR228W	DIA3	P52290	468 aa		4.01	□□□□□ -1.77
SLX1	YBR228W	COS10	P52924	374 aa		4.01	□□□□□ -1.77
SLX1	YBR228W	EMC4	P53073	190 aa		4.01	□□□□□ -1.77
SLX1	YBR228W	SMM1	P53720	384 aa	Known RBP	4.01	□□□□□ -1.77
SLX1	YBR228W	VAC7	P53950	1165 aa		4.01	□□□□□ -1.77
SLX1	YBR228W	RSM23	Q01163	450 aa		4.01	□□□□□ -1.77
SLX1	YBR228W	PET117	Q02771	107 aa		4.01	□□□□□ -1.77
SLX1	YBR228W	RPN9	Q04062	393 aa	Known RBP	4.01	□□□□□ -1.77
SLX1	YBR228W	ERP1	Q05359	219 aa	Known RBP	4.01	□□□□□ -1.77
SLX1	YBR228W	GLO2	Q05584	274 aa		4.01	□□□□□ -1.77
SLX1	YBR228W	NSE1	Q07913	336 aa		4.01	□□□□□ -1.77
SLX1	YBR228W	CLP1	Q08685	445 aa	Predicted RBP	4.01	□□□□□ -1.77
SLX1	YBR228W	RMD5	Q12508	421 aa		4.01	□□□□□ -1.77
SLX1	YBR228W	YMR030W-A	Q3E760	96 aa		4.01	□□□□□ -1.77
SLX1	YBR228W	MSF1	P08425	469 aa		4	□□□□□ -1.77
SLX1	YBR228W	RPL20A	P0CX23	172 aa	Known RBP	4	□□□□□ -1.77
SLX1	YBR228W	RPL20B	P0CX24	172 aa	Predicted RBP	4	□□□□□ -1.77
SLX1	YBR228W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	not detected
SLX1	YBR228W	NSP1	P14907	823 aa	Known RBP	4	□□□□□ -1.77
SLX1	YBR228W	AMD1	P15274	810 aa	Known RBP	4	□□□□□ -1.77
SLX1	YBR228W	LDB7	P38210	180 aa		4	□□□□□ -1.77
SLX1	YBR228W	LIN1	P38852	340 aa	Predicted RBP	4	□□□□□ -1.77
SLX1	YBR228W	ELO1	P39540	310 aa		4	□□□□□ -1.77
SLX1	YBR228W	YEL068C	P39977	110 aa		4	□□□□□ -1.77
SLX1	YBR228W	OSW5	P40219	148 aa		4	□□□□□ -1.77
SLX1	YBR228W	PEP8	P40335	379 aa		4	□□□□□ -1.77
SLX1	YBR228W	LIA1	P47120	325 aa	Known RBP	4	□□□□□ -1.77
SLX1	YBR228W	DUG3	P53871	357 aa		4	□□□□□ -1.77
SLX1	YBR228W	YNL143C	P53908	130 aa		4	□□□□□ -1.77
SLX1	YBR228W	RNY1	Q02933	434 aa	Known RBP	4	□□□□□ -1.77
SLX1	YBR228W	YMR209C	Q03648	457 aa		4	□□□□□ -1.77
SLX1	YBR228W	PSR1	Q07800	427 aa		4	□□□□□ -1.77
SLX1	YBR228W	TEN1	Q07921	160 aa		4	□□□□□ -1.77
SLX1	YBR228W	NKP1	Q12493	238 aa		4	□□□□□ -1.77
SLX1	YBR228W	RGS2	Q99188	309 aa		4	□□□□□ -1.77
SLX1	YBR228W	SEN1	Q00416	2231 aa	Known RBP	3.99	□□□□□ -1.77
SLX1	YBR228W	YCR099C	P25657	155 aa		3.99	□□□□□ -1.77
SLX1	YBR228W	BRF1	P29056	596 aa		3.99	□□□□□ -1.77
SLX1	YBR228W	MRP20	P32387	263 aa		3.99	□□□□□ -1.77
SLX1	YBR228W	MAK5	P38112	773 aa	Predicted RBP	3.99	□□□□□ -1.77
SLX1	YBR228W	YBR062C	P38239	180 aa		3.99	□□□□□ -1.77
SLX1	YBR228W	PHO89	P38361	574 aa		3.99	□□□□□ -1.77
SLX1	YBR228W	VPS52	P39904	641 aa		3.99	□□□□□ -1.77
SLX1	YBR228W	SLZ1	P40167	298 aa		3.99	□□□□□ -1.77
SLX1	YBR228W	ALG8	P40351	577 aa		3.99	□□□□□ -1.77
SLX1	YBR228W	SEC28	P40509	296 aa	Known RBP	3.99	□□□□□ -1.77
SLX1	YBR228W	SER33	P40510	469 aa		3.99	□□□□□ -1.77
SLX1	YBR228W	GLG2	P47011	380 aa		3.99	□□□□□ -1.77
SLX1	YBR228W	ERG26	P53199	349 aa	Known RBP	3.99	□□□□□ -1.77
SLX1	YBR228W	TAF11	Q04226	346 aa		3.99	□□□□□ -1.77
SLX1	YBR228W	YLR177W	Q06251	628 aa		3.99	□□□□□ -1.77
SLX1	YBR228W	AYT1	Q12226	474 aa		3.99	□□□□□ -1.77
SLX1	YBR228W	SPE4	Q12455	300 aa		3.99	□□□□□ -1.77
SLX1	YBR228W	YOR338W	Q99326	363 aa		3.99	□□□□□ -1.77
SLX1	YBR228W	STE2	D6VTK4	431 aa		3.98	□□□□□ -1.77
SLX1	YBR228W	CAR1	P00812	333 aa	Known RBP	3.98	□□□□□ -1.77
SLX1	YBR228W	UBA1	P22515	1024 aa	Known RBP	3.98	□□□□□ -1.77
SLX1	YBR228W	LDB16	P25587	256 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms