RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 NAP1L4Q99733 375 aaKnown RBP19.54■□□□□ 0.72
PHGDH-227ENST00000641811 KAT6AQ92794 2004 aa19.54■□□□□ 0.72
PHGDH-227ENST00000641811 ZNF862O60290 1169 aa19.53■□□□□ 0.72
PHGDH-227ENST00000641811 HBP1O60381 514 aa19.53■□□□□ 0.72
PHGDH-227ENST00000641811 CXCL10P02778 98 aa19.53■□□□□ 0.72
PHGDH-227ENST00000641811 ATP2B1P20020 1258 aa19.53■□□□□ 0.72
PHGDH-227ENST00000641811 SFNP31947 248 aa19.53■□□□□ 0.72
PHGDH-227ENST00000641811 JAK3P52333 1124 aa19.53■□□□□ 0.72
PHGDH-227ENST00000641811 SMAD3P84022 425 aaKnown RBP19.53■□□□□ 0.72
PHGDH-227ENST00000641811 DNAJB3Q8WWF6 145 aa19.53■□□□□ 0.72
PHGDH-227ENST00000641811 FAM20AQ96MK3 541 aa19.53■□□□□ 0.72
PHGDH-227ENST00000641811 FAM49AQ9H0Q0 323 aaPredicted RBP19.53■□□□□ 0.72
PHGDH-227ENST00000641811 VAV3Q9UKW4 847 aa19.53■□□□□ 0.72
PHGDH-227ENST00000641811 IGSF9BQ9UPX0 1349 aa19.52■□□□□ 0.72
PHGDH-227ENST00000641811 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.52■□□□□ 0.72
PHGDH-227ENST00000641811 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.52■□□□□ 0.72
PHGDH-227ENST00000641811 ZBTB42B2RXF5 422 aa19.52■□□□□ 0.72
PHGDH-227ENST00000641811 KIF28PB7ZC32 967 aa19.52■□□□□ 0.72
PHGDH-227ENST00000641811 EML1O00423 815 aa19.52■□□□□ 0.72
PHGDH-227ENST00000641811 MARCH6O60337 910 aa19.52■□□□□ 0.72
PHGDH-227ENST00000641811 ACTN1P12814 892 aa19.52■□□□□ 0.72
PHGDH-227ENST00000641811 KLRC1P26715 233 aa19.52■□□□□ 0.72
PHGDH-227ENST00000641811 TAF2Q6P1X5 1199 aa19.52■□□□□ 0.72
PHGDH-227ENST00000641811 MTHFD1LQ6UB35 978 aa19.52■□□□□ 0.72
PHGDH-227ENST00000641811 TNPO1Q92973 898 aaKnown RBP19.52■□□□□ 0.72
PHGDH-227ENST00000641811 MTIF3Q9H2K0 278 aaKnown RBP19.52■□□□□ 0.72
PHGDH-227ENST00000641811 SLC4A7Q9Y6M7 1214 aa19.52■□□□□ 0.72
PHGDH-227ENST00000641811 CAND2O75155 1236 aa19.51■□□□□ 0.71
PHGDH-227ENST00000641811 PARNO95453 639 aaKnown RBP19.51■□□□□ 0.71
PHGDH-227ENST00000641811 CHRNA1P02708 482 aa19.51■□□□□ 0.71
PHGDH-227ENST00000641811 GJB2P29033 226 aa19.51■□□□□ 0.71
PHGDH-227ENST00000641811 BBXQ8WY36 941 aaPredicted RBP19.51■□□□□ 0.71
PHGDH-227ENST00000641811 FOXP1Q9H334 677 aaPredicted RBP19.51■□□□□ 0.71
PHGDH-227ENST00000641811 PCDHA2Q9Y5H9 948 aa19.51■□□□□ 0.71
PHGDH-227ENST00000641811 TBX3O15119 743 aa19.5■□□□□ 0.71
PHGDH-227ENST00000641811 PBX2P40425 430 aa19.5■□□□□ 0.71
PHGDH-227ENST00000641811 PRKCEQ02156 737 aa19.5■□□□□ 0.71
PHGDH-227ENST00000641811 TMEM62Q0P6H9 643 aa19.5■□□□□ 0.71
PHGDH-227ENST00000641811 PPP2R5CQ13362 524 aa19.5■□□□□ 0.71
PHGDH-227ENST00000641811 GNL2Q13823 731 aaKnown RBP19.5■□□□□ 0.71
PHGDH-227ENST00000641811 ZNF484Q5JVG2 852 aa19.5■□□□□ 0.71
PHGDH-227ENST00000641811 FAM26DQ5JW98 314 aa19.5■□□□□ 0.71
PHGDH-227ENST00000641811 GPR153Q6NV75 609 aa19.5■□□□□ 0.71
PHGDH-227ENST00000641811 CNKSR3Q6P9H4 555 aa19.5■□□□□ 0.71
PHGDH-227ENST00000641811 RPAINQ86UA6 219 aa19.5■□□□□ 0.71
PHGDH-227ENST00000641811 DEFB123Q8N688 67 aa19.5■□□□□ 0.71
PHGDH-227ENST00000641811 BANK1Q8NDB2 785 aa19.5■□□□□ 0.71
PHGDH-227ENST00000641811 RDM1Q8NG50 284 aa19.5■□□□□ 0.71
PHGDH-227ENST00000641811 COL1A2P08123 1366 aa19.49■□□□□ 0.71
PHGDH-227ENST00000641811 BAG4O95429 457 aaKnown RBP19.49■□□□□ 0.71
PHGDH-227ENST00000641811 SLC34A2O95436 690 aa19.49■□□□□ 0.71
PHGDH-227ENST00000641811 OATP04181 439 aa19.49■□□□□ 0.71
PHGDH-227ENST00000641811 MCM7P33993 719 aa19.49■□□□□ 0.71
PHGDH-227ENST00000641811 RABGGTBP53611 331 aa19.49■□□□□ 0.71
PHGDH-227ENST00000641811 MGAT3Q09327 533 aa19.49■□□□□ 0.71
PHGDH-227ENST00000641811 CALCRLQ16602 461 aa19.49■□□□□ 0.71
PHGDH-227ENST00000641811 RSPH3Q86UC2 560 aa19.49■□□□□ 0.71
PHGDH-227ENST00000641811 NOSTRINQ8IVI9 506 aa19.49■□□□□ 0.71
PHGDH-227ENST00000641811 DBF4BQ8NFT6 615 aa19.49■□□□□ 0.71
PHGDH-227ENST00000641811 FAM161BQ96MY7 647 aa19.49■□□□□ 0.71
PHGDH-227ENST00000641811 SMC3Q9UQE7 1217 aa19.49■□□□□ 0.71
PHGDH-227ENST00000641811 CDY2AQ9Y6F7 541 aa19.49■□□□□ 0.71
PHGDH-227ENST00000641811 MYH9P35579 1960 aaKnown RBP19.49■□□□□ 0.71
PHGDH-227ENST00000641811 WDR81Q562E7 1941 aa19.49■□□□□ 0.71
PHGDH-227ENST00000641811 TMEM150BA6NC51 233 aa19.48■□□□□ 0.71
PHGDH-227ENST00000641811 NEMFO60524 1076 aa19.48■□□□□ 0.71
PHGDH-227ENST00000641811 C22orf31O95567 290 aa19.48■□□□□ 0.71
PHGDH-227ENST00000641811 ATP2A2P16615 1042 aaKnown RBP19.48■□□□□ 0.71
PHGDH-227ENST00000641811 DNAJB2P25686 324 aa19.48■□□□□ 0.71
PHGDH-227ENST00000641811 MRPS6P82932 125 aaKnown RBP19.48■□□□□ 0.71
PHGDH-227ENST00000641811 SPIRE1Q08AE8 756 aa19.48■□□□□ 0.71
PHGDH-227ENST00000641811 ZNF174Q15697 407 aa19.48■□□□□ 0.71
PHGDH-227ENST00000641811 NCAPH2Q6IBW4 605 aa19.48■□□□□ 0.71
PHGDH-227ENST00000641811 SLFN12Q8IYM2 578 aa19.48■□□□□ 0.71
PHGDH-227ENST00000641811 FAM167AQ96KS9 214 aa19.48■□□□□ 0.71
PHGDH-227ENST00000641811 PBX4Q9BYU1 374 aa19.48■□□□□ 0.71
PHGDH-227ENST00000641811 TMEM60Q9H2L4 133 aa19.48■□□□□ 0.71
PHGDH-227ENST00000641811 NRBP2Q9NSY0 501 aa19.48■□□□□ 0.71
PHGDH-227ENST00000641811 KIF3AQ9Y496 699 aa19.48■□□□□ 0.71
PHGDH-227ENST00000641811 SMIM35A0A1B0GVV1 85 aa19.47■□□□□ 0.71
PHGDH-227ENST00000641811 BAIAP3O94812 1187 aa19.47■□□□□ 0.71
PHGDH-227ENST00000641811 STBD1O95210 358 aa19.47■□□□□ 0.71
PHGDH-227ENST00000641811 GHRP10912 638 aa19.47■□□□□ 0.71
PHGDH-227ENST00000641811 U2AF2P26368 475 aaKnown RBP eCLIP19.47■□□□□ 0.714e-10■■□□□ 11.5
PHGDH-227ENST00000641811 TXKP42681 527 aa19.47■□□□□ 0.71
PHGDH-227ENST00000641811 WDR5P61964 334 aaKnown RBP19.47■□□□□ 0.71
PHGDH-227ENST00000641811 NBR1Q14596 966 aa19.47■□□□□ 0.71
PHGDH-227ENST00000641811 PLEKHG4Q58EX7 1191 aa19.47■□□□□ 0.71
PHGDH-227ENST00000641811 TMCO2Q7Z6W1 182 aaPredicted RBP19.47■□□□□ 0.71
PHGDH-227ENST00000641811 KIAA0319LQ8IZA0 1049 aa19.47■□□□□ 0.71
PHGDH-227ENST00000641811 MTMR9Q96QG7 549 aa19.47■□□□□ 0.71
PHGDH-227ENST00000641811 SH2D3AQ9BRG2 576 aa19.47■□□□□ 0.71
PHGDH-227ENST00000641811 DDX11L8A8MPP1 907 aa19.46■□□□□ 0.71
PHGDH-227ENST00000641811 MYOGP15173 224 aa19.46■□□□□ 0.71
PHGDH-227ENST00000641811 DEFB103AP81534 67 aa19.46■□□□□ 0.71
PHGDH-227ENST00000641811 CUL4AQ13619 759 aa19.46■□□□□ 0.71
PHGDH-227ENST00000641811 IKBKEQ14164 716 aa19.46■□□□□ 0.71
PHGDH-227ENST00000641811 LPIN1Q14693 890 aa19.46■□□□□ 0.71
PHGDH-227ENST00000641811 MCTP1Q6DN14 999 aa19.46■□□□□ 0.71
PHGDH-227ENST00000641811 METTL13Q8N6R0 699 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms