RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	NYAP2	Q9P242	653 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	VAV3	Q9UKW4	847 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	ASTN1	O14525	1302 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	ECE2	O60344	883 aa		18.46	■□□□□ 0.55
PHGDH-223	ENST00000641597	RPA1	P27694	616 aa		18.46	■□□□□ 0.55
PHGDH-223	ENST00000641597	CHRNA5	P30532	468 aa		18.46	■□□□□ 0.55
PHGDH-223	ENST00000641597	ZYX	Q15942	572 aa	Known RBP	18.46	■□□□□ 0.55
PHGDH-223	ENST00000641597	KCTD16	Q68DU8	428 aa		18.46	■□□□□ 0.55
PHGDH-223	ENST00000641597	CDAN1	Q8IWY9	1227 aa		18.46	■□□□□ 0.55
PHGDH-223	ENST00000641597	KLHL7	Q8IXQ5	586 aa		18.46	■□□□□ 0.55
PHGDH-223	ENST00000641597	C10orf67	Q8IYJ2	551 aa		18.46	■□□□□ 0.55
PHGDH-223	ENST00000641597	SYT2	Q8N9I0	419 aa	Predicted RBP	18.46	■□□□□ 0.55
PHGDH-223	ENST00000641597	DCAF4	Q8WV16	495 aa		18.46	■□□□□ 0.55
PHGDH-223	ENST00000641597	EPB41L5	Q9HCM4	733 aa		18.46	■□□□□ 0.55
PHGDH-223	ENST00000641597	COL11A2	P13942	1736 aa	Predicted RBP	18.46	■□□□□ 0.55
PHGDH-223	ENST00000641597	KRT14	P02533	472 aa		18.46	■□□□□ 0.55
PHGDH-223	ENST00000641597	MARS	P56192	900 aa	Known RBP	18.46	■□□□□ 0.55
PHGDH-223	ENST00000641597	SLC27A3	Q5K4L6	730 aa		18.46	■□□□□ 0.55
PHGDH-223	ENST00000641597	SYDE2	Q5VT97	1194 aa		18.46	■□□□□ 0.55
PHGDH-223	ENST00000641597	SLFN12	Q8IYM2	578 aa		18.46	■□□□□ 0.55
PHGDH-223	ENST00000641597	SH2D3C	Q8N5H7	860 aa		18.46	■□□□□ 0.55
PHGDH-223	ENST00000641597	ACER1	Q8TDN7	264 aa		18.46	■□□□□ 0.55
PHGDH-223	ENST00000641597	PRMT6	Q96LA8	375 aa	Predicted RBP	18.46	■□□□□ 0.55
PHGDH-223	ENST00000641597	SPAG5	Q96R06	1193 aa		18.46	■□□□□ 0.55
PHGDH-223	ENST00000641597	WDR18	Q9BV38	432 aa		18.46	■□□□□ 0.55
PHGDH-223	ENST00000641597	QTRT2	Q9H974	415 aa	Known RBP	18.46	■□□□□ 0.55
PHGDH-223	ENST00000641597	CFB	P00751	764 aa		18.45	■□□□□ 0.54
PHGDH-223	ENST00000641597	AOC3	Q16853	763 aa		18.45	■□□□□ 0.54
PHGDH-223	ENST00000641597	TATDN1	Q6P1N9	297 aa		18.45	■□□□□ 0.54
PHGDH-223	ENST00000641597	TPH2	Q8IWU9	490 aa		18.45	■□□□□ 0.54
PHGDH-223	ENST00000641597	EIF2AK1	Q9BQI3	630 aa	Known RBP	18.45	■□□□□ 0.54
PHGDH-223	ENST00000641597	EDEM3	Q9BZQ6	932 aa		18.45	■□□□□ 0.54
PHGDH-223	ENST00000641597	AIPL1	Q9NZN9	384 aa		18.45	■□□□□ 0.54
PHGDH-223	ENST00000641597	SCAF8	Q9UPN6	1271 aa	Known RBP	18.45	■□□□□ 0.54
PHGDH-223	ENST00000641597	HEXIM1	O94992	359 aa	Known RBP	18.45	■□□□□ 0.54
PHGDH-223	ENST00000641597	NR3C1	P04150	777 aa		18.45	■□□□□ 0.54
PHGDH-223	ENST00000641597	ZNF76	P36508	570 aa		18.45	■□□□□ 0.54
PHGDH-223	ENST00000641597	CFAP221	Q4G0U5	840 aa		18.45	■□□□□ 0.54
PHGDH-223	ENST00000641597	CCDC70	Q6NSX1	233 aa		18.45	■□□□□ 0.54
PHGDH-223	ENST00000641597	CCDC174	Q6PII3	467 aa		18.45	■□□□□ 0.54
PHGDH-223	ENST00000641597	EPM2AIP1	Q7L775	607 aa	Predicted RBP	18.45	■□□□□ 0.54
PHGDH-223	ENST00000641597	WRAP73	Q9P2S5	460 aa	Predicted RBP	18.45	■□□□□ 0.54
PHGDH-223	ENST00000641597	GOLGA6C	A6NDK9	693 aa		18.44	■□□□□ 0.54
PHGDH-223	ENST00000641597	GOLGA6D	P0CG33	693 aa		18.44	■□□□□ 0.54
PHGDH-223	ENST00000641597	SREBF1	P36956	1147 aa		18.44	■□□□□ 0.54
PHGDH-223	ENST00000641597	MEI1	Q5TIA1	1274 aa		18.44	■□□□□ 0.54
PHGDH-223	ENST00000641597	ZC3H3	Q8IXZ2	948 aa	Known RBP	18.44	■□□□□ 0.54
PHGDH-223	ENST00000641597	RNF10	Q8N5U6	811 aa	Known RBP	18.44	■□□□□ 0.54
PHGDH-223	ENST00000641597	INPP4A	Q96PE3	977 aa	Predicted RBP	18.44	■□□□□ 0.54
PHGDH-223	ENST00000641597	GOLGA6A	Q9NYA3	693 aa		18.44	■□□□□ 0.54
PHGDH-223	ENST00000641597	PRR12	Q9ULL5	1215 aa		18.44	■□□□□ 0.54
PHGDH-223	ENST00000641597	MYO1C	O00159	1063 aa		18.44	■□□□□ 0.54
PHGDH-223	ENST00000641597	KCNK3	O14649	394 aa		18.44	■□□□□ 0.54
PHGDH-223	ENST00000641597	GNA14	O95837	355 aa		18.44	■□□□□ 0.54
PHGDH-223	ENST00000641597	XRCC5	P13010	732 aa	Known RBP	18.44	■□□□□ 0.54
PHGDH-223	ENST00000641597	NOP2	P46087	812 aa	Known RBP	18.44	■□□□□ 0.54
PHGDH-223	ENST00000641597	EXOC3L4	Q17RC7	722 aa		18.44	■□□□□ 0.54
PHGDH-223	ENST00000641597	EDRF1	Q3B7T1	1238 aa		18.44	■□□□□ 0.54
PHGDH-223	ENST00000641597	TTMP	Q5BVD1	217 aa		18.44	■□□□□ 0.54
PHGDH-223	ENST00000641597	SYN2	Q92777	582 aa	Predicted RBP	18.44	■□□□□ 0.54
PHGDH-223	ENST00000641597	SLC35C1	Q96A29	364 aa		18.44	■□□□□ 0.54
PHGDH-223	ENST00000641597	AP1M1	Q9BXS5	423 aa		18.44	■□□□□ 0.54
PHGDH-223	ENST00000641597	SIX2	Q9NPC8	291 aa		18.44	■□□□□ 0.54
PHGDH-223	ENST00000641597	PCDHGC5	Q9Y5F6	944 aa		18.44	■□□□□ 0.54
PHGDH-223	ENST00000641597	SPATA31A6	Q5VVP1	1343 aa		18.44	■□□□□ 0.54
PHGDH-223	ENST00000641597	CLRN2	A0PK11	232 aa		18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	TMCO5B	A8MYB1	307 aa		18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	TGFB1I1	O43294	461 aa		18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	AFP	P02771	609 aa	Known RBP	18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	BMP3	P12645	472 aa		18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	PLS1	Q14651	629 aa		18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	TMEM179	Q6ZVK1	233 aa		18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	TRMT1L	Q7Z2T5	733 aa	Known RBP	18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	PKD2L1	Q9P0L9	805 aa		18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	TRPC5	Q9UL62	973 aa	Predicted RBP	18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	TRAF3IP3	Q9Y228	551 aa		18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	RRP15	Q9Y3B9	282 aa	Known RBP	18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	PITPNM2	Q9BZ72	1349 aa		18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	TCP10L2	B9ZVM9	353 aa		18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	TULP1	O00294	542 aa	Predicted RBP	18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	LRRN2	O75325	713 aa		18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	AP3B2	Q13367	1082 aa		18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	EPHA7	Q15375	998 aa		18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597		Q4G0T1	1027 aa		18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	PODN	Q7Z5L7	613 aa		18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	DDX42	Q86XP3	938 aa	Known RBP eCLIP	18.43	■□□□□ 0.54	3e-6	■■■□□ 16.1
PHGDH-223	ENST00000641597	GOLGA6L1	Q8N7Z2	621 aa		18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	CASKIN2	Q8WXE0	1202 aa		18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	CSRNP1	Q96S65	589 aa		18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	GCNT4	Q9P109	453 aa		18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	FEZ2	Q9UHY8	353 aa	Predicted RBP	18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	RABGAP1	Q9Y3P9	1069 aa		18.43	■□□□□ 0.54
PHGDH-223	ENST00000641597	IGLV3-22	A0A075B6J6	115 aa		18.42	■□□□□ 0.54
PHGDH-223	ENST00000641597	GFPT2	O94808	682 aa		18.42	■□□□□ 0.54
PHGDH-223	ENST00000641597	ALDH1B1	P30837	517 aa		18.42	■□□□□ 0.54
PHGDH-223	ENST00000641597	HSPA1L	P34931	641 aa		18.42	■□□□□ 0.54
PHGDH-223	ENST00000641597	ITIH3	Q06033	890 aa		18.42	■□□□□ 0.54
PHGDH-223	ENST00000641597	RINT1	Q6NUQ1	792 aa		18.42	■□□□□ 0.54
PHGDH-223	ENST00000641597	FOXR2	Q6PJQ5	311 aa		18.42	■□□□□ 0.54
PHGDH-223	ENST00000641597	MAEA	Q7L5Y9	396 aa		18.42	■□□□□ 0.54

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