RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 NAALADL2Q58DX5 795 aa19.04■□□□□ 0.64
SCARB2-223ENST00000640640 BSPRYQ5W0U4 402 aa19.04■□□□□ 0.64
SCARB2-223ENST00000640640 KCNF1Q9H3M0 494 aa19.04■□□□□ 0.64
SCARB2-223ENST00000640640 FGFR2P21802 821 aa19.04■□□□□ 0.64
SCARB2-223ENST00000640640 DPYDQ12882 1025 aa19.04■□□□□ 0.64
SCARB2-223ENST00000640640 ANKRD36BP1Q96IX9 119 aa19.04■□□□□ 0.64
SCARB2-223ENST00000640640 OSBPP22059 807 aa19.04■□□□□ 0.64
SCARB2-223ENST00000640640 ANKRD40Q6AI12 368 aa19.04■□□□□ 0.64
SCARB2-223ENST00000640640 CAPN12Q6ZSI9 719 aa19.04■□□□□ 0.64
SCARB2-223ENST00000640640 CCDC125Q86Z20 511 aa19.04■□□□□ 0.64
SCARB2-223ENST00000640640 RUNDC3BQ96NL0 473 aa19.04■□□□□ 0.64
SCARB2-223ENST00000640640 RNF146Q9NTX7 359 aa19.04■□□□□ 0.64
SCARB2-223ENST00000640640 PDHBP11177 359 aa19.03■□□□□ 0.64
SCARB2-223ENST00000640640 PLTPP55058 493 aa19.03■□□□□ 0.64
SCARB2-223ENST00000640640 BBOF1Q8ND07 529 aa19.03■□□□□ 0.64
SCARB2-223ENST00000640640 MCPH1Q8NEM0 835 aa19.03■□□□□ 0.64
SCARB2-223ENST00000640640 NEK9Q8TD19 979 aa19.03■□□□□ 0.64
SCARB2-223ENST00000640640 NXF1Q9UBU9 619 aaKnown RBP19.03■□□□□ 0.64
SCARB2-223ENST00000640640 TTLL3Q9Y4R7 772 aa19.03■□□□□ 0.64
SCARB2-223ENST00000640640 GPR75-ASB3A0A0A6YYF3 556 aa19.03■□□□□ 0.64
SCARB2-223ENST00000640640 NAA30Q147X3 362 aaPredicted RBP19.03■□□□□ 0.64
SCARB2-223ENST00000640640 CDC42EP5Q6NZY7 148 aa19.03■□□□□ 0.64
SCARB2-223ENST00000640640 ABCB6Q9NP58 842 aa19.03■□□□□ 0.64
SCARB2-223ENST00000640640 HSPA6P17066 643 aa19.03■□□□□ 0.64
SCARB2-223ENST00000640640 IREB2P48200 963 aaKnown RBP19.03■□□□□ 0.64
SCARB2-223ENST00000640640 KRT76Q01546 638 aa19.03■□□□□ 0.64
SCARB2-223ENST00000640640 CASP8Q14790 479 aa19.03■□□□□ 0.64
SCARB2-223ENST00000640640 SNRNP48Q6IEG0 339 aaKnown RBP19.03■□□□□ 0.64
SCARB2-223ENST00000640640 HHIPL2Q6UWX4 724 aa19.03■□□□□ 0.64
SCARB2-223ENST00000640640 EXOC8Q8IYI6 725 aa19.03■□□□□ 0.64
SCARB2-223ENST00000640640 ADSSL1Q8N142 457 aa19.03■□□□□ 0.64
SCARB2-223ENST00000640640 MRPL47Q9HD33 250 aaKnown RBP19.03■□□□□ 0.64
SCARB2-223ENST00000640640 FAN1Q9Y2M0 1017 aa19.03■□□□□ 0.64
SCARB2-223ENST00000640640 A0A1B0GTH6 734 aa19.02■□□□□ 0.64
SCARB2-223ENST00000640640 ANO9A1A5B4 782 aa19.02■□□□□ 0.64
SCARB2-223ENST00000640640 CAPN9O14815 690 aa19.02■□□□□ 0.64
SCARB2-223ENST00000640640 NDUFB10O96000 172 aa19.02■□□□□ 0.64
SCARB2-223ENST00000640640 GRIN1Q05586 938 aa19.02■□□□□ 0.64
SCARB2-223ENST00000640640 HPS3Q969F9 1004 aa19.02■□□□□ 0.64
SCARB2-223ENST00000640640 SEL1LQ9UBV2 794 aa19.02■□□□□ 0.64
SCARB2-223ENST00000640640 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.02■□□□□ 0.64
SCARB2-223ENST00000640640 PDS5AQ29RF7 1337 aaKnown RBP19.02■□□□□ 0.64
SCARB2-223ENST00000640640 RNF40O75150 1001 aa19.02■□□□□ 0.64
SCARB2-223ENST00000640640 P4HBP07237 508 aaKnown RBP19.02■□□□□ 0.64
SCARB2-223ENST00000640640 PNMA6AP0CW24 399 aaPredicted RBP19.02■□□□□ 0.64
SCARB2-223ENST00000640640 QARSP47897 775 aaKnown RBP19.02■□□□□ 0.64
SCARB2-223ENST00000640640 SLC7A5Q01650 507 aa19.02■□□□□ 0.64
SCARB2-223ENST00000640640 MTF1Q14872 753 aa19.02■□□□□ 0.64
SCARB2-223ENST00000640640 MAP3K14Q99558 947 aa19.02■□□□□ 0.64
SCARB2-223ENST00000640640 STXBP3O00186 592 aa19.02■□□□□ 0.64
SCARB2-223ENST00000640640 SGO2Q562F6 1265 aa19.02■□□□□ 0.64
SCARB2-223ENST00000640640 SESTD1Q86VW0 696 aa19.02■□□□□ 0.64
SCARB2-223ENST00000640640 UBE2Q2LH0YL09 131 aa19.02■□□□□ 0.63
SCARB2-223ENST00000640640 SRGAP2O75044 1071 aa19.02■□□□□ 0.63
SCARB2-223ENST00000640640 MAN1A1P33908 653 aa19.02■□□□□ 0.63
SCARB2-223ENST00000640640 PPP4CP60510 307 aa19.02■□□□□ 0.63
SCARB2-223ENST00000640640 NSUN6Q8TEA1 469 aaKnown RBP19.02■□□□□ 0.63
SCARB2-223ENST00000640640 HOXC10Q9NYD6 342 aa19.02■□□□□ 0.63
SCARB2-223ENST00000640640 LIMA1Q9UHB6 759 aaKnown RBP19.02■□□□□ 0.63
SCARB2-223ENST00000640640 ATP8A1Q9Y2Q0 1164 aa19.02■□□□□ 0.63
SCARB2-223ENST00000640640 GOLGA8SH3BPF8 625 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 GCLMP48507 274 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 CEP55Q53EZ4 464 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 EIF2AK1Q9BQI3 630 aaKnown RBP19.01■□□□□ 0.63
SCARB2-223ENST00000640640 APOL6Q9BWW8 343 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 ZBTB7AO95365 584 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 SRGAP2CP0DJJ0 459 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 OSTNP61366 133 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 CCZ1BP86790 482 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 CCZ1P86791 482 aaPredicted RBP19.01■□□□□ 0.63
SCARB2-223ENST00000640640 LMNB2Q03252 620 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 ZBTB33Q86T24 672 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 TAB3Q8N5C8 712 aaPredicted RBP19.01■□□□□ 0.63
SCARB2-223ENST00000640640 RIOK1Q9BRS2 568 aaKnown RBP19.01■□□□□ 0.63
SCARB2-223ENST00000640640 ZMYND12Q9H0C1 365 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 NYAP2Q9P242 653 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 HSPA1LP34931 641 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 PHBP35232 272 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 GFPT1Q06210 699 aaPredicted RBP19.01■□□□□ 0.63
SCARB2-223ENST00000640640 PNMA8AQ86V59 439 aaPredicted RBP19.01■□□□□ 0.63
SCARB2-223ENST00000640640 LDHDQ86WU2 507 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 RHOT2Q8IXI1 618 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 PPM1EQ8WY54 764 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 HAUS1Q96CS2 278 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 SLC10A5Q5PT55 438 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 E4F1Q66K89 784 aaPredicted RBP19.01■□□□□ 0.63
SCARB2-223ENST00000640640 MAP7D3Q8IWC1 876 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 CCDC117Q8IWD4 279 aaPredicted RBP19.01■□□□□ 0.63
SCARB2-223ENST00000640640 CACNA2D3Q8IZS8 1091 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 GPATCH11Q8N954 259 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 LXNQ9BS40 222 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 TMEM60Q9H2L4 133 aa19.01■□□□□ 0.63
SCARB2-223ENST00000640640 PALMO75781 387 aa19■□□□□ 0.63
SCARB2-223ENST00000640640 STK4Q13043 487 aa19■□□□□ 0.63
SCARB2-223ENST00000640640 SLFN12LQ6IEE8 588 aa19■□□□□ 0.63
SCARB2-223ENST00000640640 TRIM50Q86XT4 487 aa19■□□□□ 0.63
SCARB2-223ENST00000640640 CCDC110Q8TBZ0 833 aa19■□□□□ 0.63
SCARB2-223ENST00000640640 MSTO1Q9BUK6 570 aa19■□□□□ 0.63
SCARB2-223ENST00000640640 TLR3O15455 904 aaKnown RBP19■□□□□ 0.63
SCARB2-223ENST00000640640 RHOBTB3O94955 611 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms