RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 ZNF746Q6NUN9 644 aaPredicted RBP16.01■□□□□ 0.15
CHD1L-211ENST00000639534 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.01■□□□□ 0.15
CHD1L-211ENST00000639534 TRIM59Q8IWR1 403 aa16.01■□□□□ 0.15
CHD1L-211ENST00000639534 C4orf19Q8IY42 314 aa16.01■□□□□ 0.15
CHD1L-211ENST00000639534 MYCT1Q8N699 235 aa16.01■□□□□ 0.15
CHD1L-211ENST00000639534 PROCA1Q8NCQ7 364 aaPredicted RBP16.01■□□□□ 0.15
CHD1L-211ENST00000639534 SLC17A8Q8NDX2 589 aa16.01■□□□□ 0.15
CHD1L-211ENST00000639534 PIGOQ8TEQ8 1089 aa16.01■□□□□ 0.15
CHD1L-211ENST00000639534 L3MBTL3Q96JM7 780 aaPredicted RBP16.01■□□□□ 0.15
CHD1L-211ENST00000639534 IWS1Q96ST2 819 aa16.01■□□□□ 0.15
CHD1L-211ENST00000639534 MYO1AQ9UBC5 1043 aa16.01■□□□□ 0.15
CHD1L-211ENST00000639534 SIK3Q9Y2K2 1263 aa16.01■□□□□ 0.15
CHD1L-211ENST00000639534 PCDHB13Q9Y5F0 798 aa16.01■□□□□ 0.15
CHD1L-211ENST00000639534 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.01■□□□□ 0.15
CHD1L-211ENST00000639534 PAPPA2Q9BXP8 1791 aa16■□□□□ 0.15
CHD1L-211ENST00000639534 NFASCO94856 1347 aa16■□□□□ 0.15
CHD1L-211ENST00000639534 WDR90Q96KV7 1748 aa16■□□□□ 0.15
CHD1L-211ENST00000639534 RLFQ13129 1914 aa16■□□□□ 0.15
CHD1L-211ENST00000639534 SPDYE16A6NNV3 312 aaPredicted RBP16■□□□□ 0.15
CHD1L-211ENST00000639534 KIF5CO60282 957 aa16■□□□□ 0.15
CHD1L-211ENST00000639534 IPO7O95373 1038 aaKnown RBP16■□□□□ 0.15
CHD1L-211ENST00000639534 NR3C2P08235 984 aa16■□□□□ 0.15
CHD1L-211ENST00000639534 NR2F2P24468 414 aa16■□□□□ 0.15
CHD1L-211ENST00000639534 HNRNPH3P31942 346 aaKnown RBP16■□□□□ 0.15
CHD1L-211ENST00000639534 PSMC5P62195 406 aa16■□□□□ 0.15
CHD1L-211ENST00000639534 ERVK-24P63145 666 aa16■□□□□ 0.15
CHD1L-211ENST00000639534 PPATQ06203 517 aa16■□□□□ 0.15
CHD1L-211ENST00000639534 GNPTABQ3T906 1256 aa16■□□□□ 0.15
CHD1L-211ENST00000639534 TRIM65Q6PJ69 517 aa16■□□□□ 0.15
CHD1L-211ENST00000639534 MTERF4Q7Z6M4 381 aaKnown RBP16■□□□□ 0.15
CHD1L-211ENST00000639534 NEK11Q8NG66 645 aa16■□□□□ 0.15
CHD1L-211ENST00000639534 CCDC43Q96MW1 224 aaKnown RBP16■□□□□ 0.15
CHD1L-211ENST00000639534 INPP4AQ96PE3 977 aaPredicted RBP16■□□□□ 0.15
CHD1L-211ENST00000639534 SYT17Q9BSW7 474 aa16■□□□□ 0.15
CHD1L-211ENST00000639534 FGFBP2Q9BYJ0 223 aa16■□□□□ 0.15
CHD1L-211ENST00000639534 L2HGDHQ9H9P8 463 aa16■□□□□ 0.15
CHD1L-211ENST00000639534 ANKEF1Q9NU02 776 aa16■□□□□ 0.15
CHD1L-211ENST00000639534 DNAI1Q9UI46 699 aa16■□□□□ 0.15
CHD1L-211ENST00000639534 SAMM50Q9Y512 469 aa16■□□□□ 0.15
CHD1L-211ENST00000639534 LOC285556D6RIA3 1793 aa16■□□□□ 0.15
CHD1L-211ENST00000639534 PFASO15067 1338 aa15.99■□□□□ 0.15
CHD1L-211ENST00000639534 DDX39AO00148 427 aaKnown RBP15.99■□□□□ 0.15
CHD1L-211ENST00000639534 CXCL11O14625 94 aa15.99■□□□□ 0.15
CHD1L-211ENST00000639534 MYBP10242 640 aa15.99■□□□□ 0.15
CHD1L-211ENST00000639534 EPB41P11171 864 aaKnown RBP15.99■□□□□ 0.15
CHD1L-211ENST00000639534 CASQ1P31415 396 aa15.99■□□□□ 0.15
CHD1L-211ENST00000639534 COPB2P35606 906 aa15.99■□□□□ 0.15
CHD1L-211ENST00000639534 GNG11P61952 73 aa15.99■□□□□ 0.15
CHD1L-211ENST00000639534 TUBB2AQ13885 445 aa15.99■□□□□ 0.15
CHD1L-211ENST00000639534 MYBPC2Q14324 1141 aa15.99■□□□□ 0.15
CHD1L-211ENST00000639534 C9orf131Q5VYM1 1079 aa15.99■□□□□ 0.15
CHD1L-211ENST00000639534 PADI6Q6TGC4 694 aa15.99■□□□□ 0.15
CHD1L-211ENST00000639534 ZNF662Q6ZS27 426 aa15.99■□□□□ 0.15
CHD1L-211ENST00000639534 ERO1BQ86YB8 467 aa15.99■□□□□ 0.15
CHD1L-211ENST00000639534 FAM178BQ8IXR5 827 aa15.99■□□□□ 0.15
CHD1L-211ENST00000639534 SMAP1Q8IYB5 467 aaPredicted RBP15.99■□□□□ 0.15
CHD1L-211ENST00000639534 ANKRD13AQ8IZ07 590 aa15.99■□□□□ 0.15
CHD1L-211ENST00000639534 BANK1Q8NDB2 785 aa15.99■□□□□ 0.15
CHD1L-211ENST00000639534 DNERQ8NFT8 737 aa15.99■□□□□ 0.15
CHD1L-211ENST00000639534 MKNK1Q9BUB5 465 aa15.99■□□□□ 0.15
CHD1L-211ENST00000639534 TUBB2BQ9BVA1 445 aa15.99■□□□□ 0.15
CHD1L-211ENST00000639534 CYP39A1Q9NYL5 469 aa15.99■□□□□ 0.15
CHD1L-211ENST00000639534 LARSQ9P2J5 1176 aaKnown RBP15.99■□□□□ 0.15
CHD1L-211ENST00000639534 CGNQ9P2M7 1197 aaKnown RBP15.99■□□□□ 0.15
CHD1L-211ENST00000639534 ARMCX3Q9UH62 379 aaPredicted RBP15.99■□□□□ 0.15
CHD1L-211ENST00000639534 RIPK3Q9Y572 518 aa15.99■□□□□ 0.15
CHD1L-211ENST00000639534 EPN1Q9Y6I3 576 aaPredicted RBP15.99■□□□□ 0.15
CHD1L-211ENST00000639534 SMCHD1A6NHR9 2005 aa15.99■□□□□ 0.15
CHD1L-211ENST00000639534 TESPA1A2RU30 521 aaPredicted RBP15.98■□□□□ 0.15
CHD1L-211ENST00000639534 RSPH10B2B2RC85 870 aa15.98■□□□□ 0.15
CHD1L-211ENST00000639534 RNF225M0QZC1 329 aaPredicted RBP15.98■□□□□ 0.15
CHD1L-211ENST00000639534 PRPF6O94906 941 aaKnown RBP15.98■□□□□ 0.15
CHD1L-211ENST00000639534 NDUFA10O95299 355 aa15.98■□□□□ 0.15
CHD1L-211ENST00000639534 SLU7O95391 586 aaKnown RBP15.98■□□□□ 0.15
CHD1L-211ENST00000639534 NR3C1P04150 777 aa15.98■□□□□ 0.15
CHD1L-211ENST00000639534 RSPH10BP0C881 870 aa15.98■□□□□ 0.15
CHD1L-211ENST00000639534 CASP5P51878 434 aa15.98■□□□□ 0.15
CHD1L-211ENST00000639534 SNRPFP62306 86 aaKnown RBP15.98■□□□□ 0.15
CHD1L-211ENST00000639534 MTF1Q14872 753 aa15.98■□□□□ 0.15
CHD1L-211ENST00000639534 ARHGAP29Q52LW3 1261 aa15.98■□□□□ 0.15
CHD1L-211ENST00000639534 LBX2Q6XYB7 198 aa15.98■□□□□ 0.15
CHD1L-211ENST00000639534 HS2ST1Q7LGA3 356 aa15.98■□□□□ 0.15
CHD1L-211ENST00000639534 TXLNBQ8N3L3 684 aa15.98■□□□□ 0.15
CHD1L-211ENST00000639534 SYN2Q92777 582 aaPredicted RBP15.98■□□□□ 0.15
CHD1L-211ENST00000639534 EEF2KMTQ96G04 330 aa15.98■□□□□ 0.15
CHD1L-211ENST00000639534 ERO1AQ96HE7 468 aa15.98■□□□□ 0.15
CHD1L-211ENST00000639534 WNK4Q96J92 1243 aa15.98■□□□□ 0.15
CHD1L-211ENST00000639534 DRC1Q96MC2 740 aa15.98■□□□□ 0.15
CHD1L-211ENST00000639534 MAP7D2Q96T17 732 aa15.98■□□□□ 0.15
CHD1L-211ENST00000639534 DESI2Q9BSY9 194 aa15.98■□□□□ 0.15
CHD1L-211ENST00000639534 MMRN2Q9H8L6 949 aa15.98■□□□□ 0.15
CHD1L-211ENST00000639534 CEP72Q9P209 647 aa15.98■□□□□ 0.15
CHD1L-211ENST00000639534 A0A0G2JMZ2 1700 aa15.97■□□□□ 0.15
CHD1L-211ENST00000639534 RASSF10A6NK89 507 aa15.97■□□□□ 0.15
CHD1L-211ENST00000639534 EIF3CLB5ME19 914 aaKnown RBP15.97■□□□□ 0.15
CHD1L-211ENST00000639534 PRKG1Q13976 671 aa15.97■□□□□ 0.15
CHD1L-211ENST00000639534 ODR4Q5SWX8 454 aa15.97■□□□□ 0.15
CHD1L-211ENST00000639534 OTUD6AQ7L8S5 288 aa15.97■□□□□ 0.15
CHD1L-211ENST00000639534 ZNF720Q7Z2F6 126 aa15.97■□□□□ 0.15
CHD1L-211ENST00000639534 CACNA2D4Q7Z3S7 1137 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms