RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 CELF4Q9BZC1 486 aaKnown RBP11.92□□□□□ -0.5
SNIP1-204ENST00000638725 CD248Q9HCU0 757 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 ARMCX3Q9UH62 379 aaPredicted RBP11.92□□□□□ -0.5
SNIP1-204ENST00000638725 DDX20Q9UHI6 824 aaKnown RBP11.92□□□□□ -0.5
SNIP1-204ENST00000638725 THRAP3Q9Y2W1 955 aaKnown RBP11.92□□□□□ -0.5
SNIP1-204ENST00000638725 LOC102724159A0A0B4J2E5 919 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 POTEFA5A3E0 1075 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 TRAPPC3O43617 180 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 AFPP02771 609 aaKnown RBP11.92□□□□□ -0.5
SNIP1-204ENST00000638725 POTEIP0CG38 1075 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 SETQ01105 290 aaPredicted RBP11.92□□□□□ -0.5
SNIP1-204ENST00000638725 ZNF543Q08ER8 600 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 GRAPQ13588 217 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 PWP2Q15269 919 aaKnown RBP11.92□□□□□ -0.5
SNIP1-204ENST00000638725 GJB7Q6PEY0 223 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 POTEGQ6S5H5 508 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 POTEEQ6S8J3 1075 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 RUFY4Q6ZNE9 571 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 GRAPLQ8TC17 118 aaPredicted RBP11.92□□□□□ -0.5
SNIP1-204ENST00000638725 DPH5Q9H2P9 285 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 CD209Q9NNX6 404 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 GGA2Q9UJY4 613 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 COL24A1Q17RW2 1714 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 RFC4P35249 363 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 PPP2R2AP63151 447 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 BIRC3Q13489 604 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 PICALMQ13492 652 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 TCERG1LQ5VWI1 586 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 PPP1R18Q6NYC8 613 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 PPP4R3CPQ6ZMV5 832 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 CCDC121Q6ZUS5 278 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 AMIGO3Q86WK7 504 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 JPH2Q9BR39 696 aaPredicted RBP11.91□□□□□ -0.5
SNIP1-204ENST00000638725 DHX36Q9H2U1 1008 aaKnown RBP11.91□□□□□ -0.5
SNIP1-204ENST00000638725 BZW2Q9Y6E2 419 aaKnown RBP11.91□□□□□ -0.5
SNIP1-204ENST00000638725 ARFGEF1Q9Y6D6 1849 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 FAM170AA1A519 330 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 FRMD3A2A2Y4 597 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 USP17L15C9J2P7 530 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 USP17L10C9JJH3 530 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 USP17L13C9JLJ4 530 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 USP17L11C9JVI0 530 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 USP17L18D6R9N7 530 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 USP17L22D6RA61 530 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 USP17L17D6RBQ6 530 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 USP17L19D6RCP7 530 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 USP17L20D6RJB6 530 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 CCDC188H7C350 402 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 GNPATO15228 680 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 FLOT1O75955 427 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 GCFC2P16383 781 aaKnown RBP11.91□□□□□ -0.5
SNIP1-204ENST00000638725 PLCG2P16885 1265 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 PRKCIP41743 596 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 SLC12A3P55017 1021 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 DDR1Q08345 913 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 USP17L24Q0WX57 530 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 USP17L6PQ6QN14 398 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 PTF1AQ7RTS3 328 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 TMC3Q7Z5M5 1100 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 DAAM2Q86T65 1068 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 SFR1Q86XK3 245 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 OSBPL7Q9BZF2 842 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 TRIM31Q9BZY9 425 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 PSTPIP2Q9H939 334 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 SLC40A1Q9NP59 571 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 KLC4Q9NSK0 619 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 NENFQ9UMX5 172 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 STXBP5LQ9Y2K9 1186 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 STRCQ7RTU9 1775 aa11.91□□□□□ -0.5
SNIP1-204ENST00000638725 MEIS1O00470 390 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 RASSF9O75901 435 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 H2AFZP0C0S5 128 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 HOXD13P35453 343 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 MRPL12P52815 198 aaKnown RBP11.9□□□□□ -0.5
SNIP1-204ENST00000638725 SMTNP53814 917 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 GSCP56915 257 aaPredicted RBP11.9□□□□□ -0.5
SNIP1-204ENST00000638725 MAGOHP61326 146 aaKnown RBP11.9□□□□□ -0.5
SNIP1-204ENST00000638725 PSMC6P62333 389 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 GPSM2P81274 684 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 MTMR3Q13615 1198 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 MFSD14BQ5SR56 506 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 AGBL2Q5U5Z8 902 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 KCTD1Q719H9 257 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 H2AFVQ71UI9 128 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 FRMD5Q7Z6J6 570 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 RASGEF1CQ8N431 466 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 RAPGEF5Q92565 580 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 MAGOHBQ96A72 148 aaKnown RBP11.9□□□□□ -0.5
SNIP1-204ENST00000638725 TRIM51Q9BSJ1 452 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 SIX2Q9NPC8 291 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 PLIN4Q96Q06 1357 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 DDX3XO00571 662 aaKnown RBP eCLIP11.9□□□□□ -0.5
SNIP1-204ENST00000638725 RPS6KA4O75676 772 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 AKAP3O75969 853 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 XRCC5P13010 732 aaKnown RBP11.9□□□□□ -0.5
SNIP1-204ENST00000638725 CASP4P49662 377 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 DHX9Q08211 1270 aaKnown RBP11.9□□□□□ -0.5
SNIP1-204ENST00000638725 PABPC4Q13310 644 aaKnown RBP eCLIP11.9□□□□□ -0.5
SNIP1-204ENST00000638725 EPHA7Q15375 998 aa11.9□□□□□ -0.5
SNIP1-204ENST00000638725 KNOP1Q1ED39 458 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms