RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 ATP8B4Q8TF62 1192 aa24.56■■□□□ 1.52
SCN1B-206ENST00000638536 FOXD4L1Q9NU39 408 aa24.56■■□□□ 1.52
SCN1B-206ENST00000638536 TUBE1Q9UJT0 475 aa24.56■■□□□ 1.52
SCN1B-206ENST00000638536 K7ELQ4 463 aaPredicted RBP24.55■■□□□ 1.52
SCN1B-206ENST00000638536 NBNO60934 754 aa24.55■■□□□ 1.52
SCN1B-206ENST00000638536 SLC26A2P50443 739 aa24.55■■□□□ 1.52
SCN1B-206ENST00000638536 TOB1P50616 345 aaPredicted RBP24.55■■□□□ 1.52
SCN1B-206ENST00000638536 JAK3P52333 1124 aa24.55■■□□□ 1.52
SCN1B-206ENST00000638536 PPP2R5CQ13362 524 aa24.55■■□□□ 1.52
SCN1B-206ENST00000638536 GNL2Q13823 731 aaKnown RBP24.55■■□□□ 1.52
SCN1B-206ENST00000638536 ZNF174Q15697 407 aa24.55■■□□□ 1.52
SCN1B-206ENST00000638536 MTMR9Q96QG7 549 aa24.55■■□□□ 1.52
SCN1B-206ENST00000638536 NEMFO60524 1076 aa24.54■■□□□ 1.52
SCN1B-206ENST00000638536 SFNP31947 248 aa24.54■■□□□ 1.52
SCN1B-206ENST00000638536 TCTN1Q2MV58 587 aa24.54■■□□□ 1.52
SCN1B-206ENST00000638536 OTOP2Q7RTS6 562 aa24.54■■□□□ 1.52
SCN1B-206ENST00000638536 CKAP2LQ8IYA6 745 aa24.54■■□□□ 1.52
SCN1B-206ENST00000638536 CCDC155Q8N6L0 562 aa24.54■■□□□ 1.52
SCN1B-206ENST00000638536 LRCH3Q96II8 777 aa24.54■■□□□ 1.52
SCN1B-206ENST00000638536 KIF3AQ9Y496 699 aa24.54■■□□□ 1.52
SCN1B-206ENST00000638536 HBP1O60381 514 aa24.53■■□□□ 1.52
SCN1B-206ENST00000638536 CTSHP09668 335 aa24.53■■□□□ 1.52
SCN1B-206ENST00000638536 CALCRLQ16602 461 aa24.53■■□□□ 1.52
SCN1B-206ENST00000638536 LARP1BQ659C4 914 aaKnown RBP24.53■■□□□ 1.52
SCN1B-206ENST00000638536 MCTP1Q6DN14 999 aa24.53■■□□□ 1.52
SCN1B-206ENST00000638536 BANK1Q8NDB2 785 aa24.53■■□□□ 1.52
SCN1B-206ENST00000638536 SNX21Q969T3 373 aa24.53■■□□□ 1.52
SCN1B-206ENST00000638536 RNPC3Q96LT9 517 aaKnown RBP24.53■■□□□ 1.52
SCN1B-206ENST00000638536 CXXC1Q9P0U4 656 aaPredicted RBP24.53■■□□□ 1.52
SCN1B-206ENST00000638536 TMEM150BA6NC51 233 aa24.53■■□□□ 1.52
SCN1B-206ENST00000638536 RRN3P2A6NIE6 340 aa24.53■■□□□ 1.52
SCN1B-206ENST00000638536 MARCH6O60337 910 aa24.53■■□□□ 1.52
SCN1B-206ENST00000638536 STBD1O95210 358 aa24.53■■□□□ 1.52
SCN1B-206ENST00000638536 LRIT3Q3SXY7 679 aa24.53■■□□□ 1.52
SCN1B-206ENST00000638536 DNAJB3Q8WWF6 145 aa24.53■■□□□ 1.52
SCN1B-206ENST00000638536 WRAP73Q9P2S5 460 aaPredicted RBP24.53■■□□□ 1.52
SCN1B-206ENST00000638536 FGBP02675 491 aa24.52■■□□□ 1.52
SCN1B-206ENST00000638536 TXKP42681 527 aa24.52■■□□□ 1.52
SCN1B-206ENST00000638536 PRKCEQ02156 737 aa24.52■■□□□ 1.52
SCN1B-206ENST00000638536 TTC38Q5R3I4 469 aa24.52■■□□□ 1.52
SCN1B-206ENST00000638536 FAM109BQ6ICB4 259 aaPredicted RBP24.52■■□□□ 1.52
SCN1B-206ENST00000638536 MTHFD1LQ6UB35 978 aa24.52■■□□□ 1.52
SCN1B-206ENST00000638536 SLFN12Q8IYM2 578 aa24.52■■□□□ 1.52
SCN1B-206ENST00000638536 RDM1Q8NG50 284 aa24.52■■□□□ 1.52
SCN1B-206ENST00000638536 BBXQ8WY36 941 aaPredicted RBP24.52■■□□□ 1.52
SCN1B-206ENST00000638536 RSPH10B2B2RC85 870 aa24.51■■□□□ 1.51
SCN1B-206ENST00000638536 H3BQV1 296 aa24.51■■□□□ 1.51
SCN1B-206ENST00000638536 RSPH10BP0C881 870 aa24.51■■□□□ 1.51
SCN1B-206ENST00000638536 KLRC1P26715 233 aa24.51■■□□□ 1.51
SCN1B-206ENST00000638536 RASIP1Q5U651 963 aa24.51■■□□□ 1.51
SCN1B-206ENST00000638536 NCAPH2Q6IBW4 605 aa24.51■■□□□ 1.51
SCN1B-206ENST00000638536 PSRC1Q6PGN9 363 aaPredicted RBP24.51■■□□□ 1.51
SCN1B-206ENST00000638536 RPUSD2Q8IZ73 545 aaKnown RBP24.51■■□□□ 1.51
SCN1B-206ENST00000638536 SH2D3AQ9BRG2 576 aa24.51■■□□□ 1.51
SCN1B-206ENST00000638536 TTC12Q9H892 705 aaPredicted RBP24.51■■□□□ 1.51
SCN1B-206ENST00000638536 PCDHA12Q9UN75 941 aa24.51■■□□□ 1.51
SCN1B-206ENST00000638536 PCDHB6Q9Y5E3 794 aa24.51■■□□□ 1.51
SCN1B-206ENST00000638536 BAG4O95429 457 aaKnown RBP24.5■■□□□ 1.51
SCN1B-206ENST00000638536 CHRNA1P02708 482 aa24.5■■□□□ 1.51
SCN1B-206ENST00000638536 C4orf32Q8N8J7 132 aa24.5■■□□□ 1.51
SCN1B-206ENST00000638536 FAM49AQ9H0Q0 323 aaPredicted RBP24.5■■□□□ 1.51
SCN1B-206ENST00000638536 RGL1Q9NZL6 768 aa24.5■■□□□ 1.51
SCN1B-206ENST00000638536 GBF1Q92538 1859 aa24.5■■□□□ 1.51
SCN1B-206ENST00000638536 PTPRSQ13332 1948 aa24.5■■□□□ 1.51
SCN1B-206ENST00000638536 OATP04181 439 aa24.5■■□□□ 1.51
SCN1B-206ENST00000638536 RFC2P35250 354 aa24.5■■□□□ 1.51
SCN1B-206ENST00000638536 ZNF484Q5JVG2 852 aa24.5■■□□□ 1.51
SCN1B-206ENST00000638536 HERVK_113Q902F9 699 aa24.5■■□□□ 1.51
SCN1B-206ENST00000638536 FTOQ9C0B1 505 aaKnown RBP eCLIP24.5■■□□□ 1.51
SCN1B-206ENST00000638536 PCDHA2Q9Y5H9 948 aa24.5■■□□□ 1.51
SCN1B-206ENST00000638536 CXCL10P02778 98 aa24.49■■□□□ 1.51
SCN1B-206ENST00000638536 TMEM62Q0P6H9 643 aa24.49■■□□□ 1.51
SCN1B-206ENST00000638536 TAF2Q6P1X5 1199 aa24.49■■□□□ 1.51
SCN1B-206ENST00000638536 RPAINQ86UA6 219 aa24.49■■□□□ 1.51
SCN1B-206ENST00000638536 INTS4Q96HW7 963 aaKnown RBP24.49■■□□□ 1.51
SCN1B-206ENST00000638536 COL1A2P08123 1366 aa24.48■■□□□ 1.51
SCN1B-206ENST00000638536 GRXCR1A8MXD5 290 aa24.48■■□□□ 1.51
SCN1B-206ENST00000638536 C22orf31O95567 290 aa24.48■■□□□ 1.51
SCN1B-206ENST00000638536 TRAPPC10P48553 1259 aa24.48■■□□□ 1.51
SCN1B-206ENST00000638536 MGAT3Q09327 533 aa24.48■■□□□ 1.51
SCN1B-206ENST00000638536 EPHA7Q15375 998 aa24.48■■□□□ 1.51
SCN1B-206ENST00000638536 FAM26DQ5JW98 314 aa24.48■■□□□ 1.51
SCN1B-206ENST00000638536 TNPO1Q92973 898 aaKnown RBP24.48■■□□□ 1.51
SCN1B-206ENST00000638536 DYDC2Q96IM9 177 aa24.48■■□□□ 1.51
SCN1B-206ENST00000638536 CHD9Q3L8U1 2897 aa24.48■■□□□ 1.51
SCN1B-206ENST00000638536 MYO9BQ13459 2157 aa24.47■■□□□ 1.51
SCN1B-206ENST00000638536 POTEMA6NI47 508 aa24.47■■□□□ 1.51
SCN1B-206ENST00000638536 CEP89Q96ST8 783 aa24.47■■□□□ 1.51
SCN1B-206ENST00000638536 NOL7Q9UMY1 257 aaKnown RBP24.47■■□□□ 1.51
SCN1B-206ENST00000638536 ZBTB39O15060 712 aa24.46■■□□□ 1.51
SCN1B-206ENST00000638536 PFKMP08237 780 aa24.46■■□□□ 1.51
SCN1B-206ENST00000638536 PSMC5P62195 406 aa24.46■■□□□ 1.51
SCN1B-206ENST00000638536 CYP4A11Q02928 519 aa24.46■■□□□ 1.51
SCN1B-206ENST00000638536 CTTNQ14247 550 aaKnown RBP24.46■■□□□ 1.51
SCN1B-206ENST00000638536 TARBP2Q15633 366 aaKnown RBP24.46■■□□□ 1.51
SCN1B-206ENST00000638536 ANO5Q75V66 913 aa24.46■■□□□ 1.51
SCN1B-206ENST00000638536 KIAA0319LQ8IZA0 1049 aa24.46■■□□□ 1.51
SCN1B-206ENST00000638536 FAM167AQ96KS9 214 aa24.46■■□□□ 1.51
SCN1B-206ENST00000638536 NRBP2Q9NSY0 501 aa24.46■■□□□ 1.51
SCN1B-206ENST00000638536 MICAL3Q7RTP6 2002 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms