RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 LRRC53A6NM62 1247 aa17.52■□□□□ 0.4
CACNA1A-258ENST00000638029 BTDP43251 543 aa17.52■□□□□ 0.4
CACNA1A-258ENST00000638029 LMNB2Q03252 620 aa17.52■□□□□ 0.4
CACNA1A-258ENST00000638029 KIAA1024Q9UPX6 916 aa17.52■□□□□ 0.4
CACNA1A-258ENST00000638029 JAK2O60674 1132 aa17.52■□□□□ 0.4
CACNA1A-258ENST00000638029 CHEK2O96017 543 aa17.52■□□□□ 0.4
CACNA1A-258ENST00000638029 EXOC8Q8IYI6 725 aa17.52■□□□□ 0.4
CACNA1A-258ENST00000638029 BLIDQ8IZY5 108 aa17.52■□□□□ 0.4
CACNA1A-258ENST00000638029 FAM47DPA6NHR8 397 aa17.52■□□□□ 0.4
CACNA1A-258ENST00000638029 SKIP12755 728 aa17.52■□□□□ 0.4
CACNA1A-258ENST00000638029 MRPL28Q13084 256 aaKnown RBP17.52■□□□□ 0.4
CACNA1A-258ENST00000638029 EFHD1Q9BUP0 239 aa17.52■□□□□ 0.4
CACNA1A-258ENST00000638029 ARMCX3Q9UH62 379 aaPredicted RBP17.52■□□□□ 0.4
CACNA1A-258ENST00000638029 PPIEQ9UNP9 301 aaKnown RBP17.52■□□□□ 0.4
CACNA1A-258ENST00000638029 UBA6A0AVT1 1052 aaPredicted RBP17.52■□□□□ 0.39
CACNA1A-258ENST00000638029 USP17L12C9JPN9 530 aa17.52■□□□□ 0.39
CACNA1A-258ENST00000638029 USP17L21D6R901 530 aa17.52■□□□□ 0.39
CACNA1A-258ENST00000638029 PPP3CCP48454 512 aa17.52■□□□□ 0.39
CACNA1A-258ENST00000638029 C10orf76Q5T2E6 689 aa17.52■□□□□ 0.39
CACNA1A-258ENST00000638029 SUCLG2Q96I99 432 aa17.52■□□□□ 0.39
CACNA1A-258ENST00000638029 GOLGA8MH3BSY2 632 aa17.52■□□□□ 0.39
CACNA1A-258ENST00000638029 EHHADHQ08426 723 aa17.52■□□□□ 0.39
CACNA1A-258ENST00000638029 ANKRD13CQ8N6S4 541 aa17.52■□□□□ 0.39
CACNA1A-258ENST00000638029 KRT1P04264 644 aa17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 ARL13BQ3SXY8 428 aa17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 AGR3Q8TD06 166 aa17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 RRP15Q9Y3B9 282 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 DALRD3Q5D0E6 543 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 TTC23LQ6PF05 361 aa17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 MAGOHBQ96A72 148 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 KLC2Q9H0B6 622 aa17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 LZTS1Q9Y250 596 aa17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 PBRM1Q86U86 1689 aa17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 CYP27A1Q02318 531 aa17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 KIF21AQ7Z4S6 1674 aa17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 PRR23D1E9PI22 279 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 PRR23D2P0DMB1 279 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 KCNJ6P48051 423 aa17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 ULK4Q96C45 1275 aa17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 PDE11AQ9HCR9 933 aa17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 MYO5CQ9NQX4 1742 aa17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 PDXDC2PQ6P474 469 aa17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 NOSTRINQ8IVI9 506 aa17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 PRAG1Q86YV5 1406 aa17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 NUDT18Q6ZVK8 323 aa17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 SERTAD1Q9UHV2 236 aa17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 GOLGA4Q13439 2230 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 BIVM-ERCC5R4GMW8 1640 aa17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 POLR3AO14802 1390 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-258ENST00000638029 PSMC5P62195 406 aa17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 ADCK5Q3MIX3 580 aa17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 ZNF394Q53GI3 561 aa17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 ATP8A1Q9Y2Q0 1164 aa17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 AOX1Q06278 1338 aa17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 IL9RQ01113 521 aa17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 GIPC2Q8TF65 315 aa17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 TRIM8Q9BZR9 551 aa17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 PRPSAP2O60256 369 aa17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 KDM1AO60341 852 aa17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 SEC24DO94855 1032 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 CCDC142Q17RM4 750 aa17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 PATL1Q86TB9 770 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 TDRD7Q8NHU6 1098 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 DDX28Q9NUL7 540 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 GPATCH8Q9UKJ3 1502 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 TAS2R42Q7RTR8 314 aa17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 DMAP1Q9NPF5 467 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 INTS9Q9NV88 658 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 STAT2P52630 851 aa17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 RPS8P62241 208 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 POU5F1BQ06416 359 aa17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 LGR6Q9HBX8 967 aa17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 DYTNA2CJ06 578 aa17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 ENC1O14682 589 aa17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 ZBTB7BO15156 539 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 AFPP02771 609 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 EPB42P16452 691 aa17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 HOXD10P28358 340 aa17.5■□□□□ 0.39
CACNA1A-258ENST00000638029 ADCY3O60266 1144 aa17.49■□□□□ 0.39
CACNA1A-258ENST00000638029 PWP1Q13610 501 aa17.49■□□□□ 0.39
CACNA1A-258ENST00000638029 DMC1Q14565 340 aa17.49■□□□□ 0.39
CACNA1A-258ENST00000638029 FOSP01100 380 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-258ENST00000638029 C2orf54Q08AI8 447 aa17.49■□□□□ 0.39
CACNA1A-258ENST00000638029 SGO2Q562F6 1265 aa17.49■□□□□ 0.39
CACNA1A-258ENST00000638029 ENAHQ8N8S7 591 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-258ENST00000638029 SPZ1Q9BXG8 430 aa17.49■□□□□ 0.39
CACNA1A-258ENST00000638029 PSDA5PKW4 1024 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-258ENST00000638029 ZC3H18Q86VM9 953 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-258ENST00000638029 KLRF2D3W0D1 207 aa17.49■□□□□ 0.39
CACNA1A-258ENST00000638029 PAMP19021 973 aa17.49■□□□□ 0.39
CACNA1A-258ENST00000638029 STX18Q9P2W9 335 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-258ENST00000638029 SUPT3HO75486 399 aa17.49■□□□□ 0.39
CACNA1A-258ENST00000638029 SUN1O94901 812 aa17.49■□□□□ 0.39
CACNA1A-258ENST00000638029 GUCA1CO95843 209 aa17.49■□□□□ 0.39
CACNA1A-258ENST00000638029 HSPA1AP0DMV8 641 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-258ENST00000638029 HSPA1BP0DMV9 641 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-258ENST00000638029 SLFN13Q68D06 897 aa17.49■□□□□ 0.39
CACNA1A-258ENST00000638029 PASKQ96RG2 1323 aa17.49■□□□□ 0.39
CACNA1A-258ENST00000638029 E9PMD0 336 aa17.49■□□□□ 0.39
CACNA1A-258ENST00000638029 DEPDC1Q5TB30 811 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms