RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 ZBTB10Q96DT7 871 aa15.62■□□□□ 0.09
PNKP-228ENST00000637325 PHF20Q9BVI0 1012 aa15.62■□□□□ 0.09
PNKP-228ENST00000637325 TEKT3Q9BXF9 490 aa15.62■□□□□ 0.09
PNKP-228ENST00000637325 PCDHA2Q9Y5H9 948 aa15.62■□□□□ 0.09
PNKP-228ENST00000637325 WDR64B1ANS9 1081 aa15.61■□□□□ 0.09
PNKP-228ENST00000637325 M0R2N6 131 aa15.61■□□□□ 0.09
PNKP-228ENST00000637325 LARGE1O95461 756 aa15.61■□□□□ 0.09
PNKP-228ENST00000637325 CTDNEP1O95476 244 aa15.61■□□□□ 0.09
PNKP-228ENST00000637325 IGFBP4P22692 258 aa15.61■□□□□ 0.09
PNKP-228ENST00000637325 MRPS6P82932 125 aaKnown RBP15.61■□□□□ 0.09
PNKP-228ENST00000637325 INF2Q27J81 1249 aa15.61■□□□□ 0.09
PNKP-228ENST00000637325 Q4G0T1 1027 aa15.61■□□□□ 0.09
PNKP-228ENST00000637325 ZNF484Q5JVG2 852 aa15.61■□□□□ 0.09
PNKP-228ENST00000637325 LRCH2Q5VUJ6 765 aa15.61■□□□□ 0.09
PNKP-228ENST00000637325 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.61■□□□□ 0.09
PNKP-228ENST00000637325 TRMT1LQ7Z2T5 733 aaKnown RBP15.61■□□□□ 0.09
PNKP-228ENST00000637325 MYOCDQ8IZQ8 938 aa15.61■□□□□ 0.09
PNKP-228ENST00000637325 APBB2Q92870 758 aa15.61■□□□□ 0.09
PNKP-228ENST00000637325 IFIH1Q9BYX4 1025 aaKnown RBP15.61■□□□□ 0.09
PNKP-228ENST00000637325 BRMS1Q9HCU9 246 aa15.61■□□□□ 0.09
PNKP-228ENST00000637325 GABBR1Q9UBS5 961 aa15.61■□□□□ 0.09
PNKP-228ENST00000637325 CDY2AQ9Y6F7 541 aa15.61■□□□□ 0.09
PNKP-228ENST00000637325 PRRC2BQ5JSZ5 2229 aaKnown RBP15.61■□□□□ 0.09
PNKP-228ENST00000637325 RBAK-RBAKDNI3L0D1 243 aa15.6■□□□□ 0.09
PNKP-228ENST00000637325 CHMP2AO43633 222 aa15.6■□□□□ 0.09
PNKP-228ENST00000637325 EDIL3O43854 480 aa15.6■□□□□ 0.09
PNKP-228ENST00000637325 GJB5O95377 273 aa15.6■□□□□ 0.09
PNKP-228ENST00000637325 TDP2O95551 362 aa15.6■□□□□ 0.09
PNKP-228ENST00000637325 GHRP10912 638 aa15.6■□□□□ 0.09
PNKP-228ENST00000637325 KLRC1P26715 233 aa15.6■□□□□ 0.09
PNKP-228ENST00000637325 MGAT3Q09327 533 aa15.6■□□□□ 0.09
PNKP-228ENST00000637325 NPY5RQ15761 445 aa15.6■□□□□ 0.09
PNKP-228ENST00000637325 LETM2Q2VYF4 491 aa15.6■□□□□ 0.09
PNKP-228ENST00000637325 MTHFD1LQ6UB35 978 aa15.6■□□□□ 0.09
PNKP-228ENST00000637325 SLC5A5Q92911 643 aa15.6■□□□□ 0.09
PNKP-228ENST00000637325 RIT2Q99578 217 aa15.6■□□□□ 0.09
PNKP-228ENST00000637325 RAD9AQ99638 391 aa15.6■□□□□ 0.09
PNKP-228ENST00000637325 CERS4Q9HA82 394 aa15.6■□□□□ 0.09
PNKP-228ENST00000637325 DISC1Q9NRI5 854 aa15.6■□□□□ 0.09
PNKP-228ENST00000637325 DDX25Q9UHL0 483 aaKnown RBP15.6■□□□□ 0.09
PNKP-228ENST00000637325 MAFBQ9Y5Q3 323 aaPredicted RBP15.6■□□□□ 0.09
PNKP-228ENST00000637325 CHD9Q3L8U1 2897 aa15.6■□□□□ 0.09
PNKP-228ENST00000637325 COL1A2P08123 1366 aa15.6■□□□□ 0.09
PNKP-228ENST00000637325 TTC3P53804 2025 aa15.6■□□□□ 0.09
PNKP-228ENST00000637325 NLRC5Q86WI3 1866 aa15.59■□□□□ 0.09
PNKP-228ENST00000637325 CYP3A7-CYP3A51PA0A087WV96 503 aa15.59■□□□□ 0.09
PNKP-228ENST00000637325 CYP3A7P24462 503 aa15.59■□□□□ 0.09
PNKP-228ENST00000637325 SFNP31947 248 aa15.59■□□□□ 0.09
PNKP-228ENST00000637325 JAK3P52333 1124 aa15.59■□□□□ 0.09
PNKP-228ENST00000637325 TMEM62Q0P6H9 643 aa15.59■□□□□ 0.09
PNKP-228ENST00000637325 TRIM29Q14134 588 aa15.59■□□□□ 0.09
PNKP-228ENST00000637325 C8orf34Q49A92 452 aa15.59■□□□□ 0.09
PNKP-228ENST00000637325 MOXD1Q6UVY6 613 aa15.59■□□□□ 0.09
PNKP-228ENST00000637325 NEK8Q86SG6 692 aa15.59■□□□□ 0.09
PNKP-228ENST00000637325 NME8Q8N427 588 aa15.59■□□□□ 0.09
PNKP-228ENST00000637325 BBXQ8WY36 941 aaPredicted RBP15.59■□□□□ 0.09
PNKP-228ENST00000637325 PPM1EQ8WY54 764 aa15.59■□□□□ 0.09
PNKP-228ENST00000637325 ARNTL2Q8WYA1 636 aa15.59■□□□□ 0.09
PNKP-228ENST00000637325 FAM167AQ96KS9 214 aa15.59■□□□□ 0.09
PNKP-228ENST00000637325 OSBPL7Q9BZF2 842 aa15.59■□□□□ 0.09
PNKP-228ENST00000637325 GJB4Q9NTQ9 266 aa15.59■□□□□ 0.09
PNKP-228ENST00000637325 CEP131Q9UPN4 1083 aa15.59■□□□□ 0.09
PNKP-228ENST00000637325 LIMCH1Q9UPQ0 1083 aa15.59■□□□□ 0.09
PNKP-228ENST00000637325 TRPV2Q9Y5S1 764 aa15.59■□□□□ 0.09
PNKP-228ENST00000637325 CHD7Q9P2D1 2997 aa15.58■□□□□ 0.09
PNKP-228ENST00000637325 SMIM35A0A1B0GVV1 85 aa15.58■□□□□ 0.08
PNKP-228ENST00000637325 MARCH6O60337 910 aa15.58■□□□□ 0.08
PNKP-228ENST00000637325 UPP2O95045 317 aa15.58■□□□□ 0.08
PNKP-228ENST00000637325 ATP4AP20648 1035 aa15.58■□□□□ 0.08
PNKP-228ENST00000637325 KRT2P35908 639 aa15.58■□□□□ 0.08
PNKP-228ENST00000637325 FOSBP53539 338 aa15.58■□□□□ 0.08
PNKP-228ENST00000637325 TAP1Q03518 808 aa15.58■□□□□ 0.08
PNKP-228ENST00000637325 LPIN1Q14693 890 aa15.58■□□□□ 0.08
PNKP-228ENST00000637325 FBXO47Q5MNV8 452 aa15.58■□□□□ 0.08
PNKP-228ENST00000637325 TSHZ1Q6ZSZ6 1077 aa15.58■□□□□ 0.08
PNKP-228ENST00000637325 PIK3AP1Q6ZUJ8 805 aa15.58■□□□□ 0.08
PNKP-228ENST00000637325 MIER3Q7Z3K6 550 aa15.58■□□□□ 0.08
PNKP-228ENST00000637325 NSUN7Q8NE18 718 aaKnown RBP15.58■□□□□ 0.08
PNKP-228ENST00000637325 GJA10Q969M2 543 aa15.58■□□□□ 0.08
PNKP-228ENST00000637325 NAP1L4Q99733 375 aaKnown RBP15.58■□□□□ 0.08
PNKP-228ENST00000637325 UNC45AQ9H3U1 944 aa15.58■□□□□ 0.08
PNKP-228ENST00000637325 NRBP2Q9NSY0 501 aa15.58■□□□□ 0.08
PNKP-228ENST00000637325 INSL6Q9Y581 213 aa15.58■□□□□ 0.08
PNKP-228ENST00000637325 LCHNA4D1U4 455 aa15.57■□□□□ 0.08
PNKP-228ENST00000637325 CCNT1O60563 726 aaKnown RBP15.57■□□□□ 0.08
PNKP-228ENST00000637325 JAK2O60674 1132 aa15.57■□□□□ 0.08
PNKP-228ENST00000637325 FDPSP14324 419 aaKnown RBP15.57■□□□□ 0.08
PNKP-228ENST00000637325 ADGRE1Q14246 886 aa15.57■□□□□ 0.08
PNKP-228ENST00000637325 METTL13Q8N6R0 699 aa15.57■□□□□ 0.08
PNKP-228ENST00000637325 OXER1Q8TDS5 423 aa15.57■□□□□ 0.08
PNKP-228ENST00000637325 MBOAT7Q96N66 472 aa15.57■□□□□ 0.08
PNKP-228ENST00000637325 CELF4Q9BZC1 486 aaKnown RBP15.57■□□□□ 0.08
PNKP-228ENST00000637325 GINS2Q9Y248 185 aa15.57■□□□□ 0.08
PNKP-228ENST00000637325 PRUNE2Q8WUY3 3088 aa15.56■□□□□ 0.08
PNKP-228ENST00000637325 RFXAPO00287 272 aa15.56■□□□□ 0.08
PNKP-228ENST00000637325 GTPBP6O43824 516 aaPredicted RBP15.56■□□□□ 0.08
PNKP-228ENST00000637325 PSMD10O75832 226 aa15.56■□□□□ 0.08
PNKP-228ENST00000637325 OATP04181 439 aa15.56■□□□□ 0.08
PNKP-228ENST00000637325 GCFC2P16383 781 aaKnown RBP15.56■□□□□ 0.08
PNKP-228ENST00000637325 CCDC85BQ15834 202 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms