RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 PNKPQ96T60 521 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 UBXN6Q9BZV1 441 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 HDAC6Q9UBN7 1215 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 RNF14Q9UBS8 474 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 FBXL5Q9UKA1 691 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 ODF2LQ9ULJ1 636 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 SLITRK3O94933 977 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 NR3C1P04150 777 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 RAPGEF1Q13905 1077 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 KIAA1755Q5JYT7 1200 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 FMNL3Q8IVF7 1028 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 NOA1Q8NC60 698 aaKnown RBP13.32□□□□□ -0.28
CLN8-212ENST00000637083 CYP2W1Q8TAV3 490 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 SLC16A10Q8TF71 515 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 DYDC2Q96IM9 177 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 MMS19Q96T76 1030 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 RIT2Q99578 217 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 ZNF577Q9BSK1 485 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 PARVGQ9HBI0 331 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 MAP3K20Q9NYL2 800 aaKnown RBP13.32□□□□□ -0.28
CLN8-212ENST00000637083 L1RE1Q9UN81 338 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 TFR2Q9UP52 801 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 DUSP10Q9Y6W6 482 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 SHTN1A0MZ66 631 aa13.31□□□□□ -0.28
CLN8-212ENST00000637083 EML1O00423 815 aa13.31□□□□□ -0.28
CLN8-212ENST00000637083 SASH3O75995 380 aa13.31□□□□□ -0.28
CLN8-212ENST00000637083 PRPF6O94906 941 aaKnown RBP13.31□□□□□ -0.28
CLN8-212ENST00000637083 ERCC3P19447 782 aa13.31□□□□□ -0.28
CLN8-212ENST00000637083 PAFAH1B1P43034 410 aa13.31□□□□□ -0.28
CLN8-212ENST00000637083 MAP3K10Q02779 954 aa13.31□□□□□ -0.28
CLN8-212ENST00000637083 GFPT1Q06210 699 aaPredicted RBP13.31□□□□□ -0.28
CLN8-212ENST00000637083 KLHL30Q0D2K2 578 aa13.31□□□□□ -0.28
CLN8-212ENST00000637083 SLC18A3Q16572 532 aa13.31□□□□□ -0.28
CLN8-212ENST00000637083 EXOC3L4Q17RC7 722 aa13.31□□□□□ -0.28
CLN8-212ENST00000637083 GBP6Q6ZN66 633 aa13.31□□□□□ -0.28
CLN8-212ENST00000637083 LDHDQ86WU2 507 aa13.31□□□□□ -0.28
CLN8-212ENST00000637083 MYCT1Q8N699 235 aa13.31□□□□□ -0.28
CLN8-212ENST00000637083 GOLGA5Q8TBA6 731 aa13.31□□□□□ -0.28
CLN8-212ENST00000637083 SPAG5Q96R06 1193 aa13.31□□□□□ -0.28
CLN8-212ENST00000637083 MKNK1Q9BUB5 465 aa13.31□□□□□ -0.28
CLN8-212ENST00000637083 WDR18Q9BV38 432 aa13.31□□□□□ -0.28
CLN8-212ENST00000637083 ABCB6Q9NP58 842 aa13.31□□□□□ -0.28
CLN8-212ENST00000637083 DAAM1Q9Y4D1 1078 aa13.31□□□□□ -0.28
CLN8-212ENST00000637083 ATAD5Q96QE3 1844 aa13.31□□□□□ -0.28
CLN8-212ENST00000637083 GTPBP10A4D1E9 387 aaKnown RBP13.3□□□□□ -0.28
CLN8-212ENST00000637083 MOCS3O95396 460 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 ICAM1P05362 532 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 MYBP10242 640 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 BCRP11274 1271 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 TAL1P17542 331 aaPredicted RBP13.3□□□□□ -0.28
CLN8-212ENST00000637083 CASP5P51878 434 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 NAP1L1P55209 391 aaKnown RBP13.3□□□□□ -0.28
CLN8-212ENST00000637083 VSNL1P62760 191 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 CTTNQ14247 550 aaKnown RBP13.3□□□□□ -0.28
CLN8-212ENST00000637083 IFI16Q16666 785 aaKnown RBP13.3□□□□□ -0.28
CLN8-212ENST00000637083 CCDC181Q5TID7 509 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 C1orf186Q6ZWK4 172 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 NIPA1Q7RTP0 329 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 ZNF572Q7Z3I7 529 aaPredicted RBP13.3□□□□□ -0.28
CLN8-212ENST00000637083 VPS36Q86VN1 386 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 LPAR1Q92633 364 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 CAPZA3Q96KX2 299 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 RUSC1Q9BVN2 902 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 GANQ9H2C0 597 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 RGL1Q9NZL6 768 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 PCDHB13Q9Y5F0 798 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 FRMPD4Q14CM0 1322 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 WDR46O15213 610 aaKnown RBP13.3□□□□□ -0.28
CLN8-212ENST00000637083 SRGAP2O75044 1071 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 OAS2P29728 719 aaKnown RBP13.3□□□□□ -0.28
CLN8-212ENST00000637083 PSMC2P35998 433 aaKnown RBP13.3□□□□□ -0.28
CLN8-212ENST00000637083 RASSF7Q02833 373 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 TNFAIP1Q13829 316 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 HS2ST1Q7LGA3 356 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 CDAN1Q8IWY9 1227 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 MMGT1Q8N4V1 131 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 PRPF38AQ8NAV1 312 aaKnown RBP13.3□□□□□ -0.28
CLN8-212ENST00000637083 MXRA8Q9BRK3 442 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 CRACR2AQ9BSW2 395 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 TMEM39BQ9GZU3 492 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 CAPN6Q9Y6Q1 641 aa13.3□□□□□ -0.28
CLN8-212ENST00000637083 ASTN1O14525 1302 aa13.29□□□□□ -0.28
CLN8-212ENST00000637083 ATP8B3O60423 1300 aa13.29□□□□□ -0.28
CLN8-212ENST00000637083 CHMP2AO43633 222 aa13.29□□□□□ -0.28
CLN8-212ENST00000637083 PTGER2P43116 358 aa13.29□□□□□ -0.28
CLN8-212ENST00000637083 HSP90B2PQ58FF3 399 aa13.29□□□□□ -0.28
CLN8-212ENST00000637083 KLHDC7AQ5VTJ3 777 aa13.29□□□□□ -0.28
CLN8-212ENST00000637083 TCERG1LQ5VWI1 586 aa13.29□□□□□ -0.28
CLN8-212ENST00000637083 MIGA2Q7L4E1 593 aa13.29□□□□□ -0.28
CLN8-212ENST00000637083 PIGOQ8TEQ8 1089 aa13.29□□□□□ -0.28
CLN8-212ENST00000637083 TBC1D5Q92609 795 aa13.29□□□□□ -0.28
CLN8-212ENST00000637083 UPF1Q92900 1129 aaKnown RBP eCLIP13.29□□□□□ -0.28
CLN8-212ENST00000637083 OSBPL9Q96SU4 736 aa13.29□□□□□ -0.28
CLN8-212ENST00000637083 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.29□□□□□ -0.28
CLN8-212ENST00000637083 VIPAS39Q9H9C1 493 aa13.29□□□□□ -0.28
CLN8-212ENST00000637083 MLXIPQ9HAP2 919 aa13.29□□□□□ -0.28
CLN8-212ENST00000637083 CCPG1Q9ULG6 757 aa13.29□□□□□ -0.28
CLN8-212ENST00000637083 BTNL10A8MVZ5 291 aa13.29□□□□□ -0.28
CLN8-212ENST00000637083 IPO5O00410 1097 aaKnown RBP13.29□□□□□ -0.28
CLN8-212ENST00000637083 TLR2O60603 784 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms