RNA–Protein interactions for RNA: ENST00000635081.1

CROCCP2-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 5

Gene CROCCP2, Length 1,904 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-203ENST00000635081 RNF146Q9NTX7 359 aa22.7■■□□□ 1.23
CROCCP2-203ENST00000635081 KCND2Q9NZV8 630 aa22.7■■□□□ 1.23
CROCCP2-203ENST00000635081 CTDP1Q9Y5B0 961 aaPredicted RBP22.7■■□□□ 1.23
CROCCP2-203ENST00000635081 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.7■■□□□ 1.23
CROCCP2-203ENST00000635081 MYH11P35749 1972 aa22.7■■□□□ 1.22
CROCCP2-203ENST00000635081 EIF3CLB5ME19 914 aaKnown RBP22.7■■□□□ 1.22
CROCCP2-203ENST00000635081 NOL4O94818 638 aa22.7■■□□□ 1.22
CROCCP2-203ENST00000635081 NMT1P30419 496 aaKnown RBP22.7■■□□□ 1.22
CROCCP2-203ENST00000635081 DSG3P32926 999 aa22.7■■□□□ 1.22
CROCCP2-203ENST00000635081 NOL9Q5SY16 702 aaKnown RBP22.7■■□□□ 1.22
CROCCP2-203ENST00000635081 ARHGAP27Q6ZUM4 889 aa22.7■■□□□ 1.22
CROCCP2-203ENST00000635081 RMDN3Q96TC7 470 aa22.7■■□□□ 1.22
CROCCP2-203ENST00000635081 EIF3CQ99613 913 aaKnown RBP22.7■■□□□ 1.22
CROCCP2-203ENST00000635081 CARD6Q9BX69 1037 aa22.7■■□□□ 1.22
CROCCP2-203ENST00000635081 EDEM3Q9BZQ6 932 aa22.7■■□□□ 1.22
CROCCP2-203ENST00000635081 PARVGQ9HBI0 331 aa22.7■■□□□ 1.22
CROCCP2-203ENST00000635081 ARHGAP20Q9P2F6 1191 aa22.7■■□□□ 1.22
CROCCP2-203ENST00000635081 TRIM10Q9UDY6 481 aa22.7■■□□□ 1.22
CROCCP2-203ENST00000635081 ZNF214Q9UL59 606 aaPredicted RBP22.7■■□□□ 1.22
CROCCP2-203ENST00000635081 FAM184BQ9ULE4 1060 aa22.7■■□□□ 1.22
CROCCP2-203ENST00000635081 WDR90Q96KV7 1748 aa22.7■■□□□ 1.22
CROCCP2-203ENST00000635081 C19orf81C9J6K1 198 aa22.69■■□□□ 1.22
CROCCP2-203ENST00000635081 EIF3DO15371 548 aaKnown RBP eCLIP22.69■■□□□ 1.22
CROCCP2-203ENST00000635081 TGFB1I1O43294 461 aa22.69■■□□□ 1.22
CROCCP2-203ENST00000635081 PLEKP08567 350 aaPredicted RBP22.69■■□□□ 1.22
CROCCP2-203ENST00000635081 ERCC6LQ2NKX8 1250 aa22.69■■□□□ 1.22
CROCCP2-203ENST00000635081 NSMFQ6X4W1 530 aa22.69■■□□□ 1.22
CROCCP2-203ENST00000635081 ZNF662Q6ZS27 426 aa22.69■■□□□ 1.22
CROCCP2-203ENST00000635081 SLC35F6Q8N357 371 aa22.69■■□□□ 1.22
CROCCP2-203ENST00000635081 MYCT1Q8N699 235 aa22.69■■□□□ 1.22
CROCCP2-203ENST00000635081 MYO1AQ9UBC5 1043 aa22.69■■□□□ 1.22
CROCCP2-203ENST00000635081 ODF2LQ9ULJ1 636 aa22.69■■□□□ 1.22
CROCCP2-203ENST00000635081 LRRC53A6NM62 1247 aa22.69■■□□□ 1.22
CROCCP2-203ENST00000635081 CALUO43852 315 aaPredicted RBP22.69■■□□□ 1.22
CROCCP2-203ENST00000635081 TADA3O75528 432 aa22.69■■□□□ 1.22
CROCCP2-203ENST00000635081 GUCY2CP25092 1073 aa22.69■■□□□ 1.22
CROCCP2-203ENST00000635081 CYLC1P35663 651 aaPredicted RBP22.69■■□□□ 1.22
CROCCP2-203ENST00000635081 MAPK7Q13164 816 aa22.69■■□□□ 1.22
CROCCP2-203ENST00000635081 FRMD5Q7Z6J6 570 aa22.69■■□□□ 1.22
CROCCP2-203ENST00000635081 PDCL2Q8N4E4 241 aa22.69■■□□□ 1.22
CROCCP2-203ENST00000635081 NEK11Q8NG66 645 aa22.69■■□□□ 1.22
CROCCP2-203ENST00000635081 ZNF263O14978 683 aa22.68■■□□□ 1.22
CROCCP2-203ENST00000635081 NR3C1P04150 777 aa22.68■■□□□ 1.22
CROCCP2-203ENST00000635081 P4HBP07237 508 aaKnown RBP22.68■■□□□ 1.22
CROCCP2-203ENST00000635081 OAZ1P54368 228 aa22.68■■□□□ 1.22
CROCCP2-203ENST00000635081 BAATQ14032 418 aaPredicted RBP22.68■■□□□ 1.22
CROCCP2-203ENST00000635081 PDXDC1Q6P996 788 aa22.68■■□□□ 1.22
CROCCP2-203ENST00000635081 DAW1Q8N136 415 aa22.68■■□□□ 1.22
CROCCP2-203ENST00000635081 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.68■■□□□ 1.22
CROCCP2-203ENST00000635081 UPF1Q92900 1129 aaKnown RBP eCLIP22.68■■□□□ 1.223e-15■□□□□ 10.3
CROCCP2-203ENST00000635081 IKZF4Q9H2S9 585 aa22.68■■□□□ 1.22
CROCCP2-203ENST00000635081 HAUS4Q9H6D7 363 aa22.68■■□□□ 1.22
CROCCP2-203ENST00000635081 SEL1LQ9UBV2 794 aa22.68■■□□□ 1.22
CROCCP2-203ENST00000635081 TFR2Q9UP52 801 aa22.68■■□□□ 1.22
CROCCP2-203ENST00000635081 RCCD1A6NED2 376 aa22.67■■□□□ 1.22
CROCCP2-203ENST00000635081 ATP9AO75110 1047 aa22.67■■□□□ 1.22
CROCCP2-203ENST00000635081 AKAP3O75969 853 aa22.67■■□□□ 1.22
CROCCP2-203ENST00000635081 KRT83P78385 493 aa22.67■■□□□ 1.22
CROCCP2-203ENST00000635081 ZC2HC1CQ53FD0 456 aaPredicted RBP22.67■■□□□ 1.22
CROCCP2-203ENST00000635081 CATSPERGQ6ZRH7 1159 aa22.67■■□□□ 1.22
CROCCP2-203ENST00000635081 RRAGAQ7L523 313 aa22.67■■□□□ 1.22
CROCCP2-203ENST00000635081 ZSWIM4Q9H7M6 989 aa22.67■■□□□ 1.22
CROCCP2-203ENST00000635081 TBC1D22BQ9NU19 505 aa22.67■■□□□ 1.22
CROCCP2-203ENST00000635081 AFG3L2Q9Y4W6 797 aa22.67■■□□□ 1.22
CROCCP2-203ENST00000635081 PAPPA2Q9BXP8 1791 aa22.67■■□□□ 1.22
CROCCP2-203ENST00000635081 MYCLP12524 364 aaPredicted RBP22.67■■□□□ 1.22
CROCCP2-203ENST00000635081 KCNH2Q12809 1159 aa22.67■■□□□ 1.22
CROCCP2-203ENST00000635081 COG2Q14746 738 aa22.67■■□□□ 1.22
CROCCP2-203ENST00000635081 TMEM132BQ14DG7 1078 aa22.67■■□□□ 1.22
CROCCP2-203ENST00000635081 SNRNP48Q6IEG0 339 aaKnown RBP22.67■■□□□ 1.22
CROCCP2-203ENST00000635081 ZNF720Q7Z2F6 126 aa22.67■■□□□ 1.22
CROCCP2-203ENST00000635081 CEP72Q9P209 647 aa22.67■■□□□ 1.22
CROCCP2-203ENST00000635081 ARHGEF35A5YM69 484 aa22.66■■□□□ 1.22
CROCCP2-203ENST00000635081 CASP4P49662 377 aa22.66■■□□□ 1.22
CROCCP2-203ENST00000635081 APBA1Q02410 837 aa22.66■■□□□ 1.22
CROCCP2-203ENST00000635081 DPY19L2P1Q6NXN4 242 aa22.66■■□□□ 1.22
CROCCP2-203ENST00000635081 CRACR2AQ9BSW2 395 aa22.66■■□□□ 1.22
CROCCP2-203ENST00000635081 ARMCX3Q9UH62 379 aaPredicted RBP22.66■■□□□ 1.22
CROCCP2-203ENST00000635081 ATP2A1O14983 1001 aa22.65■■□□□ 1.22
CROCCP2-203ENST00000635081 USP2O75604 605 aaPredicted RBP22.65■■□□□ 1.22
CROCCP2-203ENST00000635081 LYPLA2O95372 231 aa22.65■■□□□ 1.22
CROCCP2-203ENST00000635081 CYP27A1Q02318 531 aa22.65■■□□□ 1.22
CROCCP2-203ENST00000635081 NFIL3Q16649 462 aa22.65■■□□□ 1.22
CROCCP2-203ENST00000635081 ARHGEF16Q5VV41 709 aa22.65■■□□□ 1.22
CROCCP2-203ENST00000635081 PADI6Q6TGC4 694 aa22.65■■□□□ 1.22
CROCCP2-203ENST00000635081 MNS1Q8NEH6 495 aa22.65■■□□□ 1.22
CROCCP2-203ENST00000635081 LSM14BQ9BX40 385 aaKnown RBP22.65■■□□□ 1.22
CROCCP2-203ENST00000635081 STRA6Q9BX79 667 aa22.65■■□□□ 1.22
CROCCP2-203ENST00000635081 LACRTQ9GZZ8 138 aa22.65■■□□□ 1.22
CROCCP2-203ENST00000635081 DBR1Q9UK59 544 aaKnown RBP22.65■■□□□ 1.22
CROCCP2-203ENST00000635081 GUCA1BQ9UMX6 200 aa22.65■■□□□ 1.22
CROCCP2-203ENST00000635081 LOC285556D6RIA3 1793 aa22.65■■□□□ 1.22
CROCCP2-203ENST00000635081 PTPRFP10586 1907 aa22.65■■□□□ 1.22
CROCCP2-203ENST00000635081 CLIC2O15247 247 aa22.65■■□□□ 1.22
CROCCP2-203ENST00000635081 SLC16A3O15427 465 aaKnown RBP22.65■■□□□ 1.22
CROCCP2-203ENST00000635081 HIP1RO75146 1068 aa22.65■■□□□ 1.22
CROCCP2-203ENST00000635081 LCA5LO95447 670 aa22.65■■□□□ 1.22
CROCCP2-203ENST00000635081 CCNE2O96020 404 aa22.65■■□□□ 1.22
CROCCP2-203ENST00000635081 SUPT20HL1Q3ZLR7 823 aa22.65■■□□□ 1.22
CROCCP2-203ENST00000635081 HGSNATQ68CP4 663 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms