RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 BTBD18B2RXH4 712 aa17.71■□□□□ 0.43
LINC00339-207ENST00000634712 EFCAB14O75071 495 aa17.71■□□□□ 0.43
LINC00339-207ENST00000634712 ZNF484Q5JVG2 852 aa17.71■□□□□ 0.43
LINC00339-207ENST00000634712 MARCH8Q5T0T0 291 aa17.71■□□□□ 0.43
LINC00339-207ENST00000634712 MIER3Q7Z3K6 550 aa17.71■□□□□ 0.43
LINC00339-207ENST00000634712 PHOSPHO2Q8TCD6 241 aa17.71■□□□□ 0.43
LINC00339-207ENST00000634712 BBXQ8WY36 941 aaPredicted RBP17.71■□□□□ 0.43
LINC00339-207ENST00000634712 GJA10Q969M2 543 aa17.71■□□□□ 0.43
LINC00339-207ENST00000634712 SLC9A7Q96T83 725 aa17.71■□□□□ 0.43
LINC00339-207ENST00000634712 PBX4Q9BYU1 374 aa17.71■□□□□ 0.43
LINC00339-207ENST00000634712 SEMA6BQ9H3T3 888 aa17.71■□□□□ 0.43
LINC00339-207ENST00000634712 UNC45AQ9H3U1 944 aa17.71■□□□□ 0.43
LINC00339-207ENST00000634712 MTMR10Q9NXD2 777 aa17.71■□□□□ 0.43
LINC00339-207ENST00000634712 MAFBQ9Y5Q3 323 aaPredicted RBP17.71■□□□□ 0.43
LINC00339-207ENST00000634712 GTF3C3Q9Y5Q9 886 aa17.71■□□□□ 0.43
LINC00339-207ENST00000634712 TMEM265A0A087WTH1 108 aa17.7■□□□□ 0.42
LINC00339-207ENST00000634712 ABHD14A-ACY1A0A1B0GW23 586 aa17.7■□□□□ 0.42
LINC00339-207ENST00000634712 KIF28PB7ZC32 967 aa17.7■□□□□ 0.42
LINC00339-207ENST00000634712 M0QZ92 97 aa17.7■□□□□ 0.42
LINC00339-207ENST00000634712 PSMD10O75832 226 aa17.7■□□□□ 0.42
LINC00339-207ENST00000634712 BAG4O95429 457 aaKnown RBP17.7■□□□□ 0.42
LINC00339-207ENST00000634712 GUCY1B3Q02153 619 aa17.7■□□□□ 0.42
LINC00339-207ENST00000634712 MBTPS1Q14703 1052 aa17.7■□□□□ 0.42
LINC00339-207ENST00000634712 IER5Q5VY09 327 aa17.7■□□□□ 0.42
LINC00339-207ENST00000634712 RPAINQ86UA6 219 aa17.7■□□□□ 0.42
LINC00339-207ENST00000634712 RDM1Q8NG50 284 aa17.7■□□□□ 0.42
LINC00339-207ENST00000634712 ETNPPLQ8TBG4 499 aa17.7■□□□□ 0.42
LINC00339-207ENST00000634712 TRAPPC12Q8WVT3 735 aa17.7■□□□□ 0.42
LINC00339-207ENST00000634712 SEPT8Q92599 483 aa17.7■□□□□ 0.42
LINC00339-207ENST00000634712 FAM167AQ96KS9 214 aa17.7■□□□□ 0.42
LINC00339-207ENST00000634712 FAM20AQ96MK3 541 aa17.7■□□□□ 0.42
LINC00339-207ENST00000634712 TBC1D32Q96NH3 1257 aa17.7■□□□□ 0.42
LINC00339-207ENST00000634712 FAM49AQ9H0Q0 323 aaPredicted RBP17.7■□□□□ 0.42
LINC00339-207ENST00000634712 NRBP2Q9NSY0 501 aa17.7■□□□□ 0.42
LINC00339-207ENST00000634712 PCDHA2Q9Y5H9 948 aa17.7■□□□□ 0.42
LINC00339-207ENST00000634712 TET1Q8NFU7 2136 aa17.7■□□□□ 0.42
LINC00339-207ENST00000634712 SLC37A4O43826 429 aa17.69■□□□□ 0.42
LINC00339-207ENST00000634712 KLRC1P26715 233 aa17.69■□□□□ 0.42
LINC00339-207ENST00000634712 PBX2P40425 430 aa17.69■□□□□ 0.42
LINC00339-207ENST00000634712 MCM2P49736 904 aa17.69■□□□□ 0.42
LINC00339-207ENST00000634712 GNL2Q13823 731 aaKnown RBP17.69■□□□□ 0.42
LINC00339-207ENST00000634712 EARS2Q5JPH6 523 aaKnown RBP17.69■□□□□ 0.42
LINC00339-207ENST00000634712 FAM26DQ5JW98 314 aa17.69■□□□□ 0.42
LINC00339-207ENST00000634712 MTHFD1LQ6UB35 978 aa17.69■□□□□ 0.42
LINC00339-207ENST00000634712 DBF4BQ8NFT6 615 aa17.69■□□□□ 0.42
LINC00339-207ENST00000634712 CEP131Q9UPN4 1083 aa17.69■□□□□ 0.42
LINC00339-207ENST00000634712 COL1A2P08123 1366 aa17.69■□□□□ 0.42
LINC00339-207ENST00000634712 MYH9P35579 1960 aaKnown RBP17.68■□□□□ 0.42
LINC00339-207ENST00000634712 TBX3O15119 743 aa17.68■□□□□ 0.42
LINC00339-207ENST00000634712 ATP4AP20648 1035 aa17.68■□□□□ 0.42
LINC00339-207ENST00000634712 RABGGTBP53611 331 aa17.68■□□□□ 0.42
LINC00339-207ENST00000634712 NME8Q8N427 588 aa17.68■□□□□ 0.42
LINC00339-207ENST00000634712 TNFRSF25Q93038 417 aa17.68■□□□□ 0.42
LINC00339-207ENST00000634712 ZBTB10Q96DT7 871 aa17.68■□□□□ 0.42
LINC00339-207ENST00000634712 ZBED2Q9BTP6 218 aa17.68■□□□□ 0.42
LINC00339-207ENST00000634712 ZNF576Q9H609 170 aa17.68■□□□□ 0.42
LINC00339-207ENST00000634712 SLC28A3Q9HAS3 691 aa17.68■□□□□ 0.42
LINC00339-207ENST00000634712 KIF3AQ9Y496 699 aa17.68■□□□□ 0.42
LINC00339-207ENST00000634712 PCDHA11Q9Y5I1 949 aa17.68■□□□□ 0.42
LINC00339-207ENST00000634712 SMIM35A0A1B0GVV1 85 aa17.67■□□□□ 0.42
LINC00339-207ENST00000634712 FAM205CA6NFA0 338 aa17.67■□□□□ 0.42
LINC00339-207ENST00000634712 CHRNA1P02708 482 aa17.67■□□□□ 0.42
LINC00339-207ENST00000634712 WDR5P61964 334 aaKnown RBP17.67■□□□□ 0.42
LINC00339-207ENST00000634712 MRPS6P82932 125 aaKnown RBP17.67■□□□□ 0.42
LINC00339-207ENST00000634712 PLEKHG4Q58EX7 1191 aa17.67■□□□□ 0.42
LINC00339-207ENST00000634712 SLFN12Q8IYM2 578 aa17.67■□□□□ 0.42
LINC00339-207ENST00000634712 TTYH1Q9H313 450 aaPredicted RBP17.67■□□□□ 0.42
LINC00339-207ENST00000634712 KCNMB3Q9NPA1 279 aa17.67■□□□□ 0.42
LINC00339-207ENST00000634712 CDY2AQ9Y6F7 541 aa17.67■□□□□ 0.42
LINC00339-207ENST00000634712 IGSF9BQ9UPX0 1349 aa17.67■□□□□ 0.42
LINC00339-207ENST00000634712 OATP04181 439 aa17.66■□□□□ 0.42
LINC00339-207ENST00000634712 GHRP10912 638 aa17.66■□□□□ 0.42
LINC00339-207ENST00000634712 HERC6Q8IVU3 1022 aa17.66■□□□□ 0.42
LINC00339-207ENST00000634712 METTL13Q8N6R0 699 aa17.66■□□□□ 0.42
LINC00339-207ENST00000634712 FBXO18Q8NFZ0 1043 aa17.66■□□□□ 0.42
LINC00339-207ENST00000634712 APBB2Q92870 758 aa17.66■□□□□ 0.42
LINC00339-207ENST00000634712 TMX3Q96JJ7 454 aa17.66■□□□□ 0.42
LINC00339-207ENST00000634712 BACH2Q9BYV9 841 aa17.66■□□□□ 0.42
LINC00339-207ENST00000634712 IFIH1Q9BYX4 1025 aaKnown RBP17.66■□□□□ 0.42
LINC00339-207ENST00000634712 NKX2-4Q9H2Z4 354 aa17.66■□□□□ 0.42
LINC00339-207ENST00000634712 MAGEB2O15479 319 aa17.66■□□□□ 0.42
LINC00339-207ENST00000634712 AMHP03971 560 aa17.66■□□□□ 0.42
LINC00339-207ENST00000634712 ATP2B1P20020 1258 aa17.66■□□□□ 0.42
LINC00339-207ENST00000634712 PRKCEQ02156 737 aa17.66■□□□□ 0.42
LINC00339-207ENST00000634712 TMEM62Q0P6H9 643 aa17.66■□□□□ 0.42
LINC00339-207ENST00000634712 POTEDQ86YR6 584 aa17.66■□□□□ 0.42
LINC00339-207ENST00000634712 FOXP1Q9H334 677 aaPredicted RBP17.66■□□□□ 0.42
LINC00339-207ENST00000634712 YBX2Q9Y2T7 364 aaKnown RBP17.66■□□□□ 0.42
LINC00339-207ENST00000634712 TRPV2Q9Y5S1 764 aa17.66■□□□□ 0.42
LINC00339-207ENST00000634712 TLL1O43897 1013 aa17.65■□□□□ 0.42
LINC00339-207ENST00000634712 DKC1O60832 514 aaKnown RBP eCLIP17.65■□□□□ 0.42
LINC00339-207ENST00000634712 MYOGP15173 224 aa17.65■□□□□ 0.42
LINC00339-207ENST00000634712 TMOD1P28289 359 aa17.65■□□□□ 0.42
LINC00339-207ENST00000634712 MGAT3Q09327 533 aa17.65■□□□□ 0.42
LINC00339-207ENST00000634712 PPP2R5CQ13362 524 aa17.65■□□□□ 0.42
LINC00339-207ENST00000634712 CALCRLQ16602 461 aa17.65■□□□□ 0.42
LINC00339-207ENST00000634712 UGCGQ16739 394 aa17.65■□□□□ 0.42
LINC00339-207ENST00000634712 TCTN1Q2MV58 587 aa17.65■□□□□ 0.42
LINC00339-207ENST00000634712 PPP2R2DQ66LE6 453 aa17.65■□□□□ 0.42
LINC00339-207ENST00000634712 B3GNT9Q6UX72 402 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms