RNA–Protein interactions for RNA: ENST00000632421.1

PHACTR4-206, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 3,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-206ENST00000632421 PRPF38AQ8NAV1 312 aaKnown RBP13.46□□□□□ -0.26
PHACTR4-206ENST00000632421 LPAR1Q92633 364 aa13.46□□□□□ -0.26
PHACTR4-206ENST00000632421 ARFGAP3Q9NP61 516 aa13.46□□□□□ -0.26
PHACTR4-206ENST00000632421 ZNF536O15090 1300 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 RPL13P26373 211 aaKnown RBP13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 BRD3Q15059 726 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 SLC9C1Q4G0N8 1177 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 TDRD12Q587J7 1177 aaKnown RBP13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 HOOK2Q96ED9 719 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 NACC1Q96RE7 527 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 MXRA8Q9BRK3 442 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 ANKZF1Q9H8Y5 726 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 POLD4Q9HCU8 107 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 ASTN1O14525 1302 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 IPO5O00410 1097 aaKnown RBP13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 ATP8B1O43520 1251 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 NR3C1P04150 777 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 EPHA7Q15375 998 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 HGSNATQ68CP4 663 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 TXLNBQ8N3L3 684 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 MYCT1Q8N699 235 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 MSANTD4Q8NCY6 345 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 TEPSINQ96N21 525 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 FER1L6Q2WGJ9 1857 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 CCDC151A5D8V7 595 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 SFI1A8K8P3 1242 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 EIF3DO15371 548 aaKnown RBP eCLIP13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 SERPING1P05155 500 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 CAPN2P17655 700 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 ZNF280AP59817 542 aaPredicted RBP13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 GABPB1Q06547 395 aaPredicted RBP13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 ASTE1Q2TB18 679 aaPredicted RBP13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 TRIM58Q8NG06 486 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 RIT2Q99578 217 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 KIAA1683Q9H0B3 1180 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 BCAS3Q9H6U6 928 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 PARVGQ9HBI0 331 aa13.45□□□□□ -0.26
PHACTR4-206ENST00000632421 FRMPD4Q14CM0 1322 aa13.44□□□□□ -0.26
PHACTR4-206ENST00000632421 ZBTB39O15060 712 aa13.44□□□□□ -0.26
PHACTR4-206ENST00000632421 SLC16A3O15427 465 aaKnown RBP13.44□□□□□ -0.26
PHACTR4-206ENST00000632421 TACC1O75410 805 aa13.44□□□□□ -0.26
PHACTR4-206ENST00000632421 MAGEA1P43355 309 aa13.44□□□□□ -0.26
PHACTR4-206ENST00000632421 MCF2L2Q86YR7 1114 aa13.44□□□□□ -0.26
PHACTR4-206ENST00000632421 METTL14Q9HCE5 456 aaKnown RBP13.44□□□□□ -0.26
PHACTR4-206ENST00000632421 RPTORQ8N122 1335 aa13.44□□□□□ -0.26
PHACTR4-206ENST00000632421 NFIBO00712 420 aa13.44□□□□□ -0.26
PHACTR4-206ENST00000632421 AFPP02771 609 aaKnown RBP13.44□□□□□ -0.26
PHACTR4-206ENST00000632421 EPB41P11171 864 aaKnown RBP13.44□□□□□ -0.26
PHACTR4-206ENST00000632421 XRCC5P13010 732 aaKnown RBP13.44□□□□□ -0.26
PHACTR4-206ENST00000632421 RPS12P25398 132 aaKnown RBP13.44□□□□□ -0.26
PHACTR4-206ENST00000632421 B3GNT9Q6UX72 402 aa13.44□□□□□ -0.26
PHACTR4-206ENST00000632421 GANQ9H2C0 597 aa13.44□□□□□ -0.26
PHACTR4-206ENST00000632421 GINM1Q9NU53 330 aa13.44□□□□□ -0.26
PHACTR4-206ENST00000632421 KCND2Q9NZV8 630 aa13.44□□□□□ -0.26
PHACTR4-206ENST00000632421 TLR2O60603 784 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 AKAP3O75969 853 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 EGFRP00533 1210 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 BCRP11274 1271 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 ITGB5P18084 799 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 APBA1Q02410 837 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 RAPGEF1Q13905 1077 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 CLEC4DQ8WXI8 215 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 LXNQ9BS40 222 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 COL20A1Q9P218 1284 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 WRAP73Q9P2S5 460 aaPredicted RBP13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 SEL1LQ9UBV2 794 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 RAB21Q9UL25 225 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 ZBTB7AO95365 584 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 GFPT1Q06210 699 aaPredicted RBP13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 CKAP4Q07065 602 aaKnown RBP13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 CPXCR1Q8N123 301 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 NEK9Q8TD19 979 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 IPO4Q8TEX9 1081 aaKnown RBP13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 LOXHD1Q8IVV2 1947 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 RBAK-RBAKDNI3L0D1 243 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 NFKBIEO00221 500 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 PJA2O43164 708 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 CTNND1O60716 968 aaKnown RBP13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 SRGAP2O75044 1071 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 RHOXF2BP0C7M4 288 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 POLD1P28340 1107 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 NMT1P30419 496 aaKnown RBP13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 KCNA1Q09470 495 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 TAF3Q5VWG9 929 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 NOA1Q8NC60 698 aaKnown RBP13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 RHOXF2Q9BQY4 288 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 MLXIPQ9HAP2 919 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 JADE2Q9NQC1 790 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 ODF2LQ9ULJ1 636 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 JRKLQ9Y4A0 524 aa13.43□□□□□ -0.26
PHACTR4-206ENST00000632421 DDX39AO00148 427 aaKnown RBP13.42□□□□□ -0.26
PHACTR4-206ENST00000632421 CLIC2O15247 247 aa13.42□□□□□ -0.26
PHACTR4-206ENST00000632421 TBC1D8O95759 1140 aa13.42□□□□□ -0.26
PHACTR4-206ENST00000632421 ALAS1P13196 640 aa13.42□□□□□ -0.26
PHACTR4-206ENST00000632421 DCAF17Q5H9S7 520 aaPredicted RBP13.42□□□□□ -0.26
PHACTR4-206ENST00000632421 STXBP4Q6ZWJ1 553 aa13.42□□□□□ -0.26
PHACTR4-206ENST00000632421 NIPA1Q7RTP0 329 aa13.42□□□□□ -0.26
PHACTR4-206ENST00000632421 ALS2CR12Q96Q35 445 aa13.42□□□□□ -0.26
PHACTR4-206ENST00000632421 PNKPQ96T60 521 aa13.42□□□□□ -0.26
PHACTR4-206ENST00000632421 SLC38A10Q9HBR0 1119 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms