RNA–Protein interactions for RNA: ENST00000630622.1

CDC42EP4-209, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-209ENST00000630622 ZSWIM4Q9H7M6 989 aa18.65■□□□□ 0.58
CDC42EP4-209ENST00000630622 GDPD2Q9HCC8 539 aa18.65■□□□□ 0.58
CDC42EP4-209ENST00000630622 STK24Q9Y6E0 443 aa18.65■□□□□ 0.58
CDC42EP4-209ENST00000630622 KAT6AQ92794 2004 aa18.65■□□□□ 0.58
CDC42EP4-209ENST00000630622 TRIP12Q14669 1992 aaPredicted RBP18.64■□□□□ 0.58
CDC42EP4-209ENST00000630622 POTEB3A0JP26 581 aa18.64■□□□□ 0.57
CDC42EP4-209ENST00000630622 ARVCFO00192 962 aa18.64■□□□□ 0.57
CDC42EP4-209ENST00000630622 OATP04181 439 aa18.64■□□□□ 0.57
CDC42EP4-209ENST00000630622 SMIM10L2AP0DMW4 78 aa18.64■□□□□ 0.57
CDC42EP4-209ENST00000630622 SMIM10L2BP0DMW5 78 aa18.64■□□□□ 0.57
CDC42EP4-209ENST00000630622 CCT6AP40227 531 aaKnown RBP18.64■□□□□ 0.57
CDC42EP4-209ENST00000630622 ME1P48163 572 aa18.64■□□□□ 0.57
CDC42EP4-209ENST00000630622 CHMP4BP1P59074 171 aa18.64■□□□□ 0.57
CDC42EP4-209ENST00000630622 ECM1Q16610 540 aa18.64■□□□□ 0.57
CDC42EP4-209ENST00000630622 SPECC1Q5M775 1068 aa18.64■□□□□ 0.57
CDC42EP4-209ENST00000630622 HYIQ5T013 277 aa18.64■□□□□ 0.57
CDC42EP4-209ENST00000630622 KRT79Q5XKE5 535 aa18.64■□□□□ 0.57
CDC42EP4-209ENST00000630622 HAUS3Q68CZ6 603 aa18.64■□□□□ 0.57
CDC42EP4-209ENST00000630622 POTEBQ6S5H4 581 aa18.64■□□□□ 0.57
CDC42EP4-209ENST00000630622 USP49Q70CQ1 688 aa18.64■□□□□ 0.57
CDC42EP4-209ENST00000630622 TPH2Q8IWU9 490 aa18.64■□□□□ 0.57
CDC42EP4-209ENST00000630622 EPSTI1Q96J88 318 aa18.64■□□□□ 0.57
CDC42EP4-209ENST00000630622 FAM167AQ96KS9 214 aa18.64■□□□□ 0.57
CDC42EP4-209ENST00000630622 CCSER1Q9C0I3 900 aa18.64■□□□□ 0.57
CDC42EP4-209ENST00000630622 HDAC6Q9UBN7 1215 aa18.64■□□□□ 0.57
CDC42EP4-209ENST00000630622 MKI67P46013 3256 aaKnown RBP18.64■□□□□ 0.57
CDC42EP4-209ENST00000630622 ZBTB42B2RXF5 422 aa18.63■□□□□ 0.57
CDC42EP4-209ENST00000630622 HBP1O60381 514 aa18.63■□□□□ 0.57
CDC42EP4-209ENST00000630622 DKC1O60832 514 aaKnown RBP eCLIP18.63■□□□□ 0.57
CDC42EP4-209ENST00000630622 MUTP22033 750 aa18.63■□□□□ 0.57
CDC42EP4-209ENST00000630622 ATN1P54259 1190 aaPredicted RBP18.63■□□□□ 0.57
CDC42EP4-209ENST00000630622 PTPN11Q06124 597 aaPredicted RBP18.63■□□□□ 0.57
CDC42EP4-209ENST00000630622 HIC1Q14526 733 aa18.63■□□□□ 0.57
CDC42EP4-209ENST00000630622 XKR3Q5GH77 459 aa18.63■□□□□ 0.57
CDC42EP4-209ENST00000630622 C1orf53Q5VUE5 145 aa18.63■□□□□ 0.57
CDC42EP4-209ENST00000630622 POTEGQ6S5H5 508 aa18.63■□□□□ 0.57
CDC42EP4-209ENST00000630622 CABP7Q86V35 215 aa18.63■□□□□ 0.57
CDC42EP4-209ENST00000630622 CKAP2LQ8IYA6 745 aa18.63■□□□□ 0.57
CDC42EP4-209ENST00000630622 BBXQ8WY36 941 aaPredicted RBP18.63■□□□□ 0.57
CDC42EP4-209ENST00000630622 SYMPKQ92797 1274 aaKnown RBP18.63■□□□□ 0.57
CDC42EP4-209ENST00000630622 SEZ6LQ9BYH1 1024 aa18.63■□□□□ 0.57
CDC42EP4-209ENST00000630622 GTF2IRD1Q9UHL9 959 aa18.63■□□□□ 0.57
CDC42EP4-209ENST00000630622 TRPC6Q9Y210 931 aa18.63■□□□□ 0.57
CDC42EP4-209ENST00000630622 TMEM150BA6NC51 233 aa18.62■□□□□ 0.57
CDC42EP4-209ENST00000630622 ZBTB39O15060 712 aa18.62■□□□□ 0.57
CDC42EP4-209ENST00000630622 SLC26A4O43511 780 aa18.62■□□□□ 0.57
CDC42EP4-209ENST00000630622 INSRRP14616 1297 aa18.62■□□□□ 0.57
CDC42EP4-209ENST00000630622 UBA7P41226 1012 aa18.62■□□□□ 0.57
CDC42EP4-209ENST00000630622 ADAM17P78536 824 aa18.62■□□□□ 0.57
CDC42EP4-209ENST00000630622 PPFIA1Q13136 1202 aa18.62■□□□□ 0.57
CDC42EP4-209ENST00000630622 GRB10Q13322 594 aa18.62■□□□□ 0.57
CDC42EP4-209ENST00000630622 LRRC26Q2I0M4 334 aa18.62■□□□□ 0.57
CDC42EP4-209ENST00000630622 SHC4Q6S5L8 630 aa18.62■□□□□ 0.57
CDC42EP4-209ENST00000630622 CLEC17AQ6ZS10 378 aa18.62■□□□□ 0.57
CDC42EP4-209ENST00000630622 ANO5Q75V66 913 aa18.62■□□□□ 0.57
CDC42EP4-209ENST00000630622 TRMT1LQ7Z2T5 733 aaKnown RBP18.62■□□□□ 0.57
CDC42EP4-209ENST00000630622 C7orf31Q8N865 590 aa18.62■□□□□ 0.57
CDC42EP4-209ENST00000630622 PNMA5Q96PV4 448 aa18.62■□□□□ 0.57
CDC42EP4-209ENST00000630622 NIFKQ9BYG3 293 aaKnown RBP18.62■□□□□ 0.57
CDC42EP4-209ENST00000630622 LOXHD1Q8IVV2 1947 aa18.62■□□□□ 0.57
CDC42EP4-209ENST00000630622 COL1A2P08123 1366 aa18.61■□□□□ 0.57
CDC42EP4-209ENST00000630622 NRCAMQ92823 1304 aa18.61■□□□□ 0.57
CDC42EP4-209ENST00000630622 KDM3AQ9Y4C1 1321 aa18.61■□□□□ 0.57
CDC42EP4-209ENST00000630622 YWHABP31946 246 aaKnown RBP18.61■□□□□ 0.57
CDC42EP4-209ENST00000630622 TARBP2Q15633 366 aaKnown RBP18.61■□□□□ 0.57
CDC42EP4-209ENST00000630622 GRIK4Q16099 956 aa18.61■□□□□ 0.57
CDC42EP4-209ENST00000630622 TMEM119Q4V9L6 283 aa18.61■□□□□ 0.57
CDC42EP4-209ENST00000630622 FAM47CQ5HY64 1035 aa18.61■□□□□ 0.57
CDC42EP4-209ENST00000630622 GDF6Q6KF10 455 aaPredicted RBP18.61■□□□□ 0.57
CDC42EP4-209ENST00000630622 ANKRD33Q7Z3H0 272 aa18.61■□□□□ 0.57
CDC42EP4-209ENST00000630622 LMBR1Q8WVP7 490 aa18.61■□□□□ 0.57
CDC42EP4-209ENST00000630622 CEP89Q96ST8 783 aa18.61■□□□□ 0.57
CDC42EP4-209ENST00000630622 NRBP2Q9NSY0 501 aa18.61■□□□□ 0.57
CDC42EP4-209ENST00000630622 SETD4Q9NVD3 440 aa18.61■□□□□ 0.57
CDC42EP4-209ENST00000630622 SEPT9Q9UHD8 586 aaPredicted RBP18.61■□□□□ 0.57
CDC42EP4-209ENST00000630622 A0A087WWV3 80 aa18.6■□□□□ 0.57
CDC42EP4-209ENST00000630622 DDX11L8A8MPP1 907 aa18.6■□□□□ 0.57
CDC42EP4-209ENST00000630622 KARSQ15046 597 aaKnown RBP18.6■□□□□ 0.57
CDC42EP4-209ENST00000630622 TRIM60Q495X7 471 aa18.6■□□□□ 0.57
CDC42EP4-209ENST00000630622 ZNF484Q5JVG2 852 aa18.6■□□□□ 0.57
CDC42EP4-209ENST00000630622 MARCH8Q5T0T0 291 aa18.6■□□□□ 0.57
CDC42EP4-209ENST00000630622 RESP18Q5W5W9 173 aa18.6■□□□□ 0.57
CDC42EP4-209ENST00000630622 PLA2G4FQ68DD2 849 aa18.6■□□□□ 0.57
CDC42EP4-209ENST00000630622 ADALQ6DHV7 355 aa18.6■□□□□ 0.57
CDC42EP4-209ENST00000630622 FAM126BQ8IXS8 530 aa18.6■□□□□ 0.57
CDC42EP4-209ENST00000630622 PIGOQ8TEQ8 1089 aa18.6■□□□□ 0.57
CDC42EP4-209ENST00000630622 TRAPPC12Q8WVT3 735 aa18.6■□□□□ 0.57
CDC42EP4-209ENST00000630622 NACC1Q96RE7 527 aa18.6■□□□□ 0.57
CDC42EP4-209ENST00000630622 CTAGE1Q96RT6 745 aa18.6■□□□□ 0.57
CDC42EP4-209ENST00000630622 ANKEF1Q9NU02 776 aa18.6■□□□□ 0.57
CDC42EP4-209ENST00000630622 DDX19AQ9NUU7 478 aaKnown RBP18.6■□□□□ 0.57
CDC42EP4-209ENST00000630622 KIAA1024Q9UPX6 916 aa18.6■□□□□ 0.57
CDC42EP4-209ENST00000630622 MROH7Q68CQ1 1323 aa18.59■□□□□ 0.57
CDC42EP4-209ENST00000630622 C17orf102A2RUQ5 167 aa18.59■□□□□ 0.57
CDC42EP4-209ENST00000630622 MBLAC1A4D2B0 266 aaPredicted RBP18.59■□□□□ 0.57
CDC42EP4-209ENST00000630622 RRN3P2A6NIE6 340 aa18.59■□□□□ 0.57
CDC42EP4-209ENST00000630622 B4GALT4O60513 344 aa18.59■□□□□ 0.57
CDC42EP4-209ENST00000630622 XRCC6P12956 609 aaKnown RBP eCLIP18.59■□□□□ 0.57
CDC42EP4-209ENST00000630622 NPEPPSP55786 919 aa18.59■□□□□ 0.57
CDC42EP4-209ENST00000630622 RTP1P59025 263 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms