RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 TRPV2Q9Y5S1 764 aa23.12■■□□□ 1.29
TARDBP-228ENST00000629725 IGSF9BQ9UPX0 1349 aa23.11■■□□□ 1.29
TARDBP-228ENST00000629725 NCOA7Q8NI08 942 aa23.11■■□□□ 1.29
TARDBP-228ENST00000629725 TNPO1Q92973 898 aaKnown RBP23.11■■□□□ 1.29
TARDBP-228ENST00000629725 FNDC1Q4ZHG4 1894 aaPredicted RBP23.11■■□□□ 1.29
TARDBP-228ENST00000629725 GATMP50440 423 aa23.1■■□□□ 1.29
TARDBP-228ENST00000629725 PCDHB12Q9Y5F1 795 aa23.1■■□□□ 1.29
TARDBP-228ENST00000629725 ZFHX2Q9C0A1 2572 aaPredicted RBP23.09■■□□□ 1.29
TARDBP-228ENST00000629725 FSD2A1L4K1 749 aa23.09■■□□□ 1.29
TARDBP-228ENST00000629725 PER2O15055 1255 aa23.09■■□□□ 1.29
TARDBP-228ENST00000629725 MAFGO15525 162 aa23.09■■□□□ 1.29
TARDBP-228ENST00000629725 ATF7P17544 494 aaPredicted RBP23.09■■□□□ 1.29
TARDBP-228ENST00000629725 UBE3AQ05086 875 aa23.09■■□□□ 1.29
TARDBP-228ENST00000629725 AAMPQ13685 434 aa23.09■■□□□ 1.29
TARDBP-228ENST00000629725 SPOUT1Q5T280 376 aaKnown RBP23.09■■□□□ 1.29
TARDBP-228ENST00000629725 CTCFLQ8NI51 663 aaPredicted RBP23.09■■□□□ 1.29
TARDBP-228ENST00000629725 ASIC4Q96FT7 647 aa23.09■■□□□ 1.29
TARDBP-228ENST00000629725 MAP3K14Q99558 947 aa23.09■■□□□ 1.29
TARDBP-228ENST00000629725 CELF4Q9BZC1 486 aaKnown RBP23.09■■□□□ 1.29
TARDBP-228ENST00000629725 AZI2Q9H6S1 392 aa23.09■■□□□ 1.29
TARDBP-228ENST00000629725 PSTPIP2Q9H939 334 aa23.09■■□□□ 1.29
TARDBP-228ENST00000629725 TLR9Q9NR96 1032 aa23.09■■□□□ 1.29
TARDBP-228ENST00000629725 TRPC6Q9Y210 931 aa23.09■■□□□ 1.29
TARDBP-228ENST00000629725 PCDHA2Q9Y5H9 948 aa23.09■■□□□ 1.29
TARDBP-228ENST00000629725 UBIAD1Q9Y5Z9 338 aa23.09■■□□□ 1.29
TARDBP-228ENST00000629725 E7EWF7 191 aa23.08■■□□□ 1.29
TARDBP-228ENST00000629725 IBSPP21815 317 aaPredicted RBP23.08■■□□□ 1.29
TARDBP-228ENST00000629725 SMARCA1P28370 1054 aa23.08■■□□□ 1.29
TARDBP-228ENST00000629725 KIF5BP33176 963 aa23.08■■□□□ 1.29
TARDBP-228ENST00000629725 IGDCC4Q8TDY8 1250 aa23.08■■□□□ 1.29
TARDBP-228ENST00000629725 SUSD6Q92537 303 aa23.08■■□□□ 1.29
TARDBP-228ENST00000629725 NEK1Q96PY6 1258 aa23.08■■□□□ 1.29
TARDBP-228ENST00000629725 PCYT2Q99447 389 aa23.08■■□□□ 1.29
TARDBP-228ENST00000629725 CDCA3Q99618 268 aaPredicted RBP23.08■■□□□ 1.29
TARDBP-228ENST00000629725 IRF2BPLQ9H1B7 796 aa23.08■■□□□ 1.29
TARDBP-228ENST00000629725 TMX1Q9H3N1 280 aa23.08■■□□□ 1.29
TARDBP-228ENST00000629725 JPH1Q9HDC5 661 aaPredicted RBP23.08■■□□□ 1.29
TARDBP-228ENST00000629725 AAASQ9NRG9 546 aa23.08■■□□□ 1.29
TARDBP-228ENST00000629725 FAM86C1Q9NVL1 165 aa23.08■■□□□ 1.29
TARDBP-228ENST00000629725 PCDHB7Q9Y5E2 793 aa23.08■■□□□ 1.29
TARDBP-228ENST00000629725 VPS13AQ96RL7 3174 aa23.07■■□□□ 1.28
TARDBP-228ENST00000629725 GFRA3O60609 400 aa23.07■■□□□ 1.28
TARDBP-228ENST00000629725 IGHDP01880 384 aa23.07■■□□□ 1.28
TARDBP-228ENST00000629725 SARSP49591 514 aaKnown RBP23.07■■□□□ 1.28
TARDBP-228ENST00000629725 VCPP55072 806 aaKnown RBP23.07■■□□□ 1.28
TARDBP-228ENST00000629725 RBM10P98175 930 aaKnown RBP23.07■■□□□ 1.28
TARDBP-228ENST00000629725 NME8Q8N427 588 aa23.07■■□□□ 1.28
TARDBP-228ENST00000629725 ATP8B4Q8TF62 1192 aa23.07■■□□□ 1.28
TARDBP-228ENST00000629725 JADE2Q9NQC1 790 aa23.07■■□□□ 1.28
TARDBP-228ENST00000629725 CACNA1HO95180 2353 aa23.07■■□□□ 1.28
TARDBP-228ENST00000629725 KDM3AQ9Y4C1 1321 aa23.07■■□□□ 1.28
TARDBP-228ENST00000629725 SPDYE3A6NKU9 549 aa23.06■■□□□ 1.28
TARDBP-228ENST00000629725 AVPR2P30518 371 aa23.06■■□□□ 1.28
TARDBP-228ENST00000629725 KRT76Q01546 638 aa23.06■■□□□ 1.28
TARDBP-228ENST00000629725 NFX1Q12986 1120 aaKnown RBP23.06■■□□□ 1.28
TARDBP-228ENST00000629725 DUSP6Q16828 381 aa23.06■■□□□ 1.28
TARDBP-228ENST00000629725 TMEM266Q2M3C6 531 aa23.06■■□□□ 1.28
TARDBP-228ENST00000629725 ZNF654Q8IZM8 581 aa23.06■■□□□ 1.28
TARDBP-228ENST00000629725 VN1R2Q8NFZ6 395 aa23.06■■□□□ 1.28
TARDBP-228ENST00000629725 TRAPPC12Q8WVT3 735 aa23.06■■□□□ 1.28
TARDBP-228ENST00000629725 LZTS2Q9BRK4 669 aa23.06■■□□□ 1.28
TARDBP-228ENST00000629725 MYL10Q9BUA6 226 aa23.06■■□□□ 1.28
TARDBP-228ENST00000629725 SLC9A2Q9UBY0 812 aa23.06■■□□□ 1.28
TARDBP-228ENST00000629725 TAF6LQ9Y6J9 622 aa23.06■■□□□ 1.28
TARDBP-228ENST00000629725 SMIM35A0A1B0GVV1 85 aa23.05■■□□□ 1.28
TARDBP-228ENST00000629725 FGF18O76093 207 aa23.05■■□□□ 1.28
TARDBP-228ENST00000629725 DDAH1O94760 285 aa23.05■■□□□ 1.28
TARDBP-228ENST00000629725 ANTXR2P58335 489 aa23.05■■□□□ 1.28
TARDBP-228ENST00000629725 PTH1RQ03431 593 aa23.05■■□□□ 1.28
TARDBP-228ENST00000629725 PLCB4Q15147 1175 aa23.05■■□□□ 1.28
TARDBP-228ENST00000629725 PTPN21Q16825 1174 aa23.05■■□□□ 1.28
TARDBP-228ENST00000629725 ATOH1Q92858 354 aaPredicted RBP23.05■■□□□ 1.28
TARDBP-228ENST00000629725 RNF216Q9NWF9 866 aaPredicted RBP23.05■■□□□ 1.28
TARDBP-228ENST00000629725 TBKBP1A7MCY6 615 aa23.04■■□□□ 1.28
TARDBP-228ENST00000629725 SRGAP2BP0DMP2 458 aa23.04■■□□□ 1.28
TARDBP-228ENST00000629725 ERVFC1P60507 584 aa23.04■■□□□ 1.28
TARDBP-228ENST00000629725 UBE2SQ16763 222 aa23.04■■□□□ 1.28
TARDBP-228ENST00000629725 PDE12Q6L8Q7 609 aaKnown RBP23.04■■□□□ 1.28
TARDBP-228ENST00000629725 FAM43BQ6ZT52 329 aaPredicted RBP23.04■■□□□ 1.28
TARDBP-228ENST00000629725 PLPPR4Q7Z2D5 763 aa23.04■■□□□ 1.28
TARDBP-228ENST00000629725 THNSL1Q8IYQ7 743 aa23.04■■□□□ 1.28
TARDBP-228ENST00000629725 LY9Q9HBG7 655 aa23.04■■□□□ 1.28
TARDBP-228ENST00000629725 TMEM260Q9NX78 707 aa23.04■■□□□ 1.28
TARDBP-228ENST00000629725 PCDHA6Q9UN73 950 aa23.04■■□□□ 1.28
TARDBP-228ENST00000629725 GINS2Q9Y248 185 aa23.04■■□□□ 1.28
TARDBP-228ENST00000629725 PCDHA8Q9Y5H6 950 aa23.04■■□□□ 1.28
TARDBP-228ENST00000629725 DENND3A2RUS2 1198 aa23.03■■□□□ 1.28
TARDBP-228ENST00000629725 PLEKHA8P1O95397 391 aa23.03■■□□□ 1.28
TARDBP-228ENST00000629725 GNAQP50148 359 aa23.03■■□□□ 1.28
TARDBP-228ENST00000629725 STAT5BP51692 787 aa23.03■■□□□ 1.28
TARDBP-228ENST00000629725 FAM102BQ5T8I3 360 aa23.03■■□□□ 1.28
TARDBP-228ENST00000629725 MTHFD1LQ6UB35 978 aa23.03■■□□□ 1.28
TARDBP-228ENST00000629725 SRBD1Q8N5C6 995 aaKnown RBP23.03■■□□□ 1.28
TARDBP-228ENST00000629725 RUFY2Q8WXA3 655 aa23.03■■□□□ 1.28
TARDBP-228ENST00000629725 KCNH7Q9NS40 1196 aa23.03■■□□□ 1.28
TARDBP-228ENST00000629725 MGEA5O60502 916 aa23.02■■□□□ 1.28
TARDBP-228ENST00000629725 RPS6KA5O75582 802 aa23.02■■□□□ 1.28
TARDBP-228ENST00000629725 ACTR2P61160 394 aa23.02■■□□□ 1.28
TARDBP-228ENST00000629725 TMEM184AQ6ZMB5 413 aa23.02■■□□□ 1.28
TARDBP-228ENST00000629725 ZBTB33Q86T24 672 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms