RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 JPH2Q9BR39 696 aaPredicted RBP12.91□□□□□ -0.34
PTPN7-219ENST00000629151 MMTAG2Q9BU76 263 aaKnown RBP12.91□□□□□ -0.34
PTPN7-219ENST00000629151 LRRC27Q9C0I9 530 aa12.91□□□□□ -0.34
PTPN7-219ENST00000629151 CUEDC2Q9H467 287 aa12.91□□□□□ -0.34
PTPN7-219ENST00000629151 STARD7Q9NQZ5 370 aa12.91□□□□□ -0.34
PTPN7-219ENST00000629151 RGL1Q9NZL6 768 aa12.91□□□□□ -0.34
PTPN7-219ENST00000629151 STK17AQ9UEE5 414 aa12.91□□□□□ -0.34
PTPN7-219ENST00000629151 DBR1Q9UK59 544 aaKnown RBP12.91□□□□□ -0.34
PTPN7-219ENST00000629151 A0A0U1RQG5 324 aaPredicted RBP12.9□□□□□ -0.34
PTPN7-219ENST00000629151 FAM237AA0A1B0GTK4 181 aa12.9□□□□□ -0.34
PTPN7-219ENST00000629151 DDX11L8A8MPP1 907 aa12.9□□□□□ -0.34
PTPN7-219ENST00000629151 MAGEB2O15479 319 aa12.9□□□□□ -0.34
PTPN7-219ENST00000629151 PTMSP20962 102 aa12.9□□□□□ -0.34
PTPN7-219ENST00000629151 YWHABP31946 246 aaKnown RBP12.9□□□□□ -0.34
PTPN7-219ENST00000629151 UBE2HP62256 183 aa12.9□□□□□ -0.34
PTPN7-219ENST00000629151 CYP4A11Q02928 519 aa12.9□□□□□ -0.34
PTPN7-219ENST00000629151 ITGA7Q13683 1181 aa12.9□□□□□ -0.34
PTPN7-219ENST00000629151 CTTNQ14247 550 aaKnown RBP12.9□□□□□ -0.34
PTPN7-219ENST00000629151 KIAA0753Q2KHM9 967 aa12.9□□□□□ -0.34
PTPN7-219ENST00000629151 C1orf53Q5VUE5 145 aa12.9□□□□□ -0.34
PTPN7-219ENST00000629151 RRAGBQ5VZM2 374 aa12.9□□□□□ -0.34
PTPN7-219ENST00000629151 SHC4Q6S5L8 630 aa12.9□□□□□ -0.34
PTPN7-219ENST00000629151 ZNF710Q8N1W2 664 aa12.9□□□□□ -0.34
PTPN7-219ENST00000629151 MRPS27Q92552 414 aaKnown RBP12.9□□□□□ -0.34
PTPN7-219ENST00000629151 KAT2BQ92831 832 aa12.9□□□□□ -0.34
PTPN7-219ENST00000629151 EPSTI1Q96J88 318 aa12.9□□□□□ -0.34
PTPN7-219ENST00000629151 CCDC43Q96MW1 224 aaKnown RBP12.9□□□□□ -0.34
PTPN7-219ENST00000629151 MAGEF1Q9HAY2 307 aa12.9□□□□□ -0.34
PTPN7-219ENST00000629151 KCNH3Q9ULD8 1083 aa12.9□□□□□ -0.34
PTPN7-219ENST00000629151 KIAA1024Q9UPX6 916 aa12.9□□□□□ -0.34
PTPN7-219ENST00000629151 TRPC6Q9Y210 931 aa12.9□□□□□ -0.34
PTPN7-219ENST00000629151 COL1A2P08123 1366 aa12.9□□□□□ -0.34
PTPN7-219ENST00000629151 MROH7Q68CQ1 1323 aa12.89□□□□□ -0.35
PTPN7-219ENST00000629151 A0A1W2PQ45 241 aaPredicted RBP12.89□□□□□ -0.35
PTPN7-219ENST00000629151 A0A1W2PQY0 241 aa12.89□□□□□ -0.35
PTPN7-219ENST00000629151 ARVCFO00192 962 aa12.89□□□□□ -0.35
PTPN7-219ENST00000629151 GAS2O43903 313 aaKnown RBP12.89□□□□□ -0.35
PTPN7-219ENST00000629151 ZNF862O60290 1169 aa12.89□□□□□ -0.35
PTPN7-219ENST00000629151 MED24O75448 989 aa12.89□□□□□ -0.35
PTPN7-219ENST00000629151 EYA4O95677 639 aa12.89□□□□□ -0.35
PTPN7-219ENST00000629151 ZNF286BP0CG31 522 aa12.89□□□□□ -0.35
PTPN7-219ENST00000629151 COL6A1P12109 1028 aa12.89□□□□□ -0.35
PTPN7-219ENST00000629151 PTGS1P23219 599 aa12.89□□□□□ -0.35
PTPN7-219ENST00000629151 CDC25AP30304 524 aa12.89□□□□□ -0.35
PTPN7-219ENST00000629151 RFC5P40937 340 aa12.89□□□□□ -0.35
PTPN7-219ENST00000629151 AMPD3Q01432 767 aa12.89□□□□□ -0.35
PTPN7-219ENST00000629151 PRKCEQ02156 737 aa12.89□□□□□ -0.35
PTPN7-219ENST00000629151 GRIN1Q05586 938 aa12.89□□□□□ -0.35
PTPN7-219ENST00000629151 PLCB4Q15147 1175 aa12.89□□□□□ -0.35
PTPN7-219ENST00000629151 SLC43A3Q8NBI5 491 aa12.89□□□□□ -0.35
PTPN7-219ENST00000629151 RNPEPQ9H4A4 650 aa12.89□□□□□ -0.35
PTPN7-219ENST00000629151 C11orf49Q9H6J7 331 aa12.89□□□□□ -0.35
PTPN7-219ENST00000629151 GDPD2Q9HCC8 539 aa12.89□□□□□ -0.35
PTPN7-219ENST00000629151 DDX19AQ9NUU7 478 aaKnown RBP12.89□□□□□ -0.35
PTPN7-219ENST00000629151 KCND2Q9NZV8 630 aa12.89□□□□□ -0.35
PTPN7-219ENST00000629151 KIAA1217Q5T5P2 1943 aa12.88□□□□□ -0.35
PTPN7-219ENST00000629151 C17orf102A2RUQ5 167 aa12.88□□□□□ -0.35
PTPN7-219ENST00000629151 PP2D1A8MPX8 630 aa12.88□□□□□ -0.35
PTPN7-219ENST00000629151 PRPF40AO75400 957 aaKnown RBP12.88□□□□□ -0.35
PTPN7-219ENST00000629151 INSRRP14616 1297 aa12.88□□□□□ -0.35
PTPN7-219ENST00000629151 ATP4AP20648 1035 aa12.88□□□□□ -0.35
PTPN7-219ENST00000629151 MARK3P27448 753 aa12.88□□□□□ -0.35
PTPN7-219ENST00000629151 STAT6P42226 847 aa12.88□□□□□ -0.35
PTPN7-219ENST00000629151 IRX5P78411 483 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-219ENST00000629151 CDC42EP1Q00587 391 aa12.88□□□□□ -0.35
PTPN7-219ENST00000629151 PPFIA1Q13136 1202 aa12.88□□□□□ -0.35
PTPN7-219ENST00000629151 GRB10Q13322 594 aa12.88□□□□□ -0.35
PTPN7-219ENST00000629151 ZRSR1Q15695 479 aaKnown RBP12.88□□□□□ -0.35
PTPN7-219ENST00000629151 NBPF20Q3BBV1 942 aa12.88□□□□□ -0.35
PTPN7-219ENST00000629151 TMEM119Q4V9L6 283 aa12.88□□□□□ -0.35
PTPN7-219ENST00000629151 SPECC1Q5M775 1068 aa12.88□□□□□ -0.35
PTPN7-219ENST00000629151 KANK3Q6NY19 840 aa12.88□□□□□ -0.35
PTPN7-219ENST00000629151 TRIM50Q86XT4 487 aa12.88□□□□□ -0.35
PTPN7-219ENST00000629151 FSIP1Q8NA03 581 aa12.88□□□□□ -0.35
PTPN7-219ENST00000629151 RETREG2Q8NC44 543 aa12.88□□□□□ -0.35
PTPN7-219ENST00000629151 CHAMP1Q96JM3 812 aa12.88□□□□□ -0.35
PTPN7-219ENST00000629151 CEP170P1Q96L14 293 aa12.88□□□□□ -0.35
PTPN7-219ENST00000629151 TIPINQ9BVW5 301 aa12.88□□□□□ -0.35
PTPN7-219ENST00000629151 SENP6Q9GZR1 1112 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-219ENST00000629151 BMP2KQ9NSY1 1161 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-219ENST00000629151 KCNG1Q9UIX4 513 aa12.88□□□□□ -0.35
PTPN7-219ENST00000629151 HPSEQ9Y251 543 aa12.88□□□□□ -0.35
PTPN7-219ENST00000629151 TELO2Q9Y4R8 837 aa12.88□□□□□ -0.35
PTPN7-219ENST00000629151 ARHGEF35A5YM69 484 aa12.87□□□□□ -0.35
PTPN7-219ENST00000629151 DGAT1O75907 488 aa12.87□□□□□ -0.35
PTPN7-219ENST00000629151 STBD1O95210 358 aa12.87□□□□□ -0.35
PTPN7-219ENST00000629151 SMIM10L2AP0DMW4 78 aa12.87□□□□□ -0.35
PTPN7-219ENST00000629151 SMIM10L2BP0DMW5 78 aa12.87□□□□□ -0.35
PTPN7-219ENST00000629151 PLCG1P19174 1290 aa12.87□□□□□ -0.35
PTPN7-219ENST00000629151 TMOD1P28289 359 aa12.87□□□□□ -0.35
PTPN7-219ENST00000629151 SYKP43405 635 aa12.87□□□□□ -0.35
PTPN7-219ENST00000629151 MNX1P50219 401 aaPredicted RBP12.87□□□□□ -0.35
PTPN7-219ENST00000629151 KARSQ15046 597 aaKnown RBP12.87□□□□□ -0.35
PTPN7-219ENST00000629151 TARBP2Q15633 366 aaKnown RBP12.87□□□□□ -0.35
PTPN7-219ENST00000629151 GRIK4Q16099 956 aa12.87□□□□□ -0.35
PTPN7-219ENST00000629151 UGCGQ16739 394 aa12.87□□□□□ -0.35
PTPN7-219ENST00000629151 XKR9Q5GH70 373 aa12.87□□□□□ -0.35
PTPN7-219ENST00000629151 TAF2Q6P1X5 1199 aa12.87□□□□□ -0.35
PTPN7-219ENST00000629151 POTEGQ6S5H5 508 aa12.87□□□□□ -0.35
PTPN7-219ENST00000629151 USP49Q70CQ1 688 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms