RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 QARSP47897 775 aaKnown RBP22.8■■□□□ 1.24
PTCD3-220ENST00000627371 FXR2P51116 673 aaKnown RBP eCLIP22.8■■□□□ 1.24
PTCD3-220ENST00000627371 RBL2Q08999 1139 aa22.8■■□□□ 1.24
PTCD3-220ENST00000627371 TMEM266Q2M3C6 531 aa22.8■■□□□ 1.24
PTCD3-220ENST00000627371 MARCH8Q5T0T0 291 aa22.8■■□□□ 1.24
PTCD3-220ENST00000627371 CCDC155Q8N6L0 562 aa22.8■■□□□ 1.24
PTCD3-220ENST00000627371 CAGE1Q8TC20 777 aa22.8■■□□□ 1.24
PTCD3-220ENST00000627371 DHX38Q92620 1227 aaKnown RBP22.8■■□□□ 1.24
PTCD3-220ENST00000627371 TUBE1Q9UJT0 475 aa22.8■■□□□ 1.24
PTCD3-220ENST00000627371 PITPNM1O00562 1244 aa22.79■■□□□ 1.24
PTCD3-220ENST00000627371 DKC1O60832 514 aaKnown RBP eCLIP22.79■■□□□ 1.24
PTCD3-220ENST00000627371 IGBP1P78318 339 aa22.79■■□□□ 1.24
PTCD3-220ENST00000627371 BFSP2Q13515 415 aa22.79■■□□□ 1.24
PTCD3-220ENST00000627371 ZNF484Q5JVG2 852 aa22.79■■□□□ 1.24
PTCD3-220ENST00000627371 NEK9Q8TD19 979 aa22.79■■□□□ 1.24
PTCD3-220ENST00000627371 BADQ92934 168 aa22.79■■□□□ 1.24
PTCD3-220ENST00000627371 LBHD1Q9BQE6 289 aaPredicted RBP22.79■■□□□ 1.24
PTCD3-220ENST00000627371 EIF2AK1Q9BQI3 630 aaKnown RBP22.79■■□□□ 1.24
PTCD3-220ENST00000627371 CEP131Q9UPN4 1083 aa22.79■■□□□ 1.24
PTCD3-220ENST00000627371 UMODL1Q5DID0 1318 aa22.79■■□□□ 1.24
PTCD3-220ENST00000627371 ZBTB42B2RXF5 422 aa22.78■■□□□ 1.24
PTCD3-220ENST00000627371 BMP15O95972 392 aa22.78■■□□□ 1.24
PTCD3-220ENST00000627371 ZSCAN22P10073 491 aaPredicted RBP22.78■■□□□ 1.24
PTCD3-220ENST00000627371 CYP2C18P33260 490 aa22.78■■□□□ 1.24
PTCD3-220ENST00000627371 MAGEA10P43363 369 aaPredicted RBP22.78■■□□□ 1.24
PTCD3-220ENST00000627371 MDM2Q00987 491 aaPredicted RBP22.78■■□□□ 1.24
PTCD3-220ENST00000627371 TRIM71Q2Q1W2 868 aaKnown RBP22.78■■□□□ 1.24
PTCD3-220ENST00000627371 MFSD5Q6N075 450 aa22.78■■□□□ 1.24
PTCD3-220ENST00000627371 FAM173BQ6P4H8 233 aa22.78■■□□□ 1.24
PTCD3-220ENST00000627371 TRAPPC12Q8WVT3 735 aa22.78■■□□□ 1.24
PTCD3-220ENST00000627371 WNT8BQ93098 351 aa22.78■■□□□ 1.24
PTCD3-220ENST00000627371 DYDC2Q96IM9 177 aa22.78■■□□□ 1.24
PTCD3-220ENST00000627371 LXNQ9BS40 222 aa22.78■■□□□ 1.24
PTCD3-220ENST00000627371 NRBP2Q9NSY0 501 aa22.78■■□□□ 1.24
PTCD3-220ENST00000627371 RGL1Q9NZL6 768 aa22.78■■□□□ 1.24
PTCD3-220ENST00000627371 SIP14410 1827 aa22.78■■□□□ 1.24
PTCD3-220ENST00000627371 LOXHD1Q8IVV2 1947 aa22.77■■□□□ 1.24
PTCD3-220ENST00000627371 STBD1O95210 358 aa22.77■■□□□ 1.24
PTCD3-220ENST00000627371 PKP1Q13835 747 aa22.77■■□□□ 1.24
PTCD3-220ENST00000627371 XKR3Q5GH77 459 aa22.77■■□□□ 1.24
PTCD3-220ENST00000627371 ARL6IP4Q66PJ3 421 aaKnown RBP22.77■■□□□ 1.24
PTCD3-220ENST00000627371 TAF2Q6P1X5 1199 aa22.77■■□□□ 1.24
PTCD3-220ENST00000627371 DTHD1Q6ZMT9 781 aa22.77■■□□□ 1.24
PTCD3-220ENST00000627371 TRMT1LQ7Z2T5 733 aaKnown RBP22.77■■□□□ 1.24
PTCD3-220ENST00000627371 GDF15Q99988 308 aa22.77■■□□□ 1.24
PTCD3-220ENST00000627371 HSD17B14Q9BPX1 270 aa22.77■■□□□ 1.24
PTCD3-220ENST00000627371 RAB34Q9BZG1 259 aa22.77■■□□□ 1.24
PTCD3-220ENST00000627371 WNT8AQ9H1J5 351 aa22.77■■□□□ 1.24
PTCD3-220ENST00000627371 WRAP73Q9P2S5 460 aaPredicted RBP22.77■■□□□ 1.24
PTCD3-220ENST00000627371 SLITRK3O94933 977 aa22.76■■□□□ 1.23
PTCD3-220ENST00000627371 F13A1P00488 732 aa22.76■■□□□ 1.23
PTCD3-220ENST00000627371 CYP4A11Q02928 519 aa22.76■■□□□ 1.23
PTCD3-220ENST00000627371 SF3A1Q15459 793 aaKnown RBP22.76■■□□□ 1.23
PTCD3-220ENST00000627371 C4orf19Q8IY42 314 aa22.76■■□□□ 1.23
PTCD3-220ENST00000627371 TMEM199Q8N511 208 aa22.76■■□□□ 1.23
PTCD3-220ENST00000627371 IGSF22Q8N9C0 903 aa22.76■■□□□ 1.23
PTCD3-220ENST00000627371 NIFKQ9BYG3 293 aaKnown RBP22.76■■□□□ 1.23
PTCD3-220ENST00000627371 ZSWIM4Q9H7M6 989 aa22.76■■□□□ 1.23
PTCD3-220ENST00000627371 SEPT9Q9UHD8 586 aaPredicted RBP22.76■■□□□ 1.23
PTCD3-220ENST00000627371 CAND2O75155 1236 aa22.75■■□□□ 1.23
PTCD3-220ENST00000627371 CKBP12277 381 aa22.75■■□□□ 1.23
PTCD3-220ENST00000627371 CTTNQ14247 550 aaKnown RBP22.75■■□□□ 1.23
PTCD3-220ENST00000627371 PDIA5Q14554 519 aa22.75■■□□□ 1.23
PTCD3-220ENST00000627371 IL17AQ16552 155 aa22.75■■□□□ 1.23
PTCD3-220ENST00000627371 MTHFD1LQ6UB35 978 aa22.75■■□□□ 1.23
PTCD3-220ENST00000627371 RUFY4Q6ZNE9 571 aa22.75■■□□□ 1.23
PTCD3-220ENST00000627371 RETREG2Q8NC44 543 aa22.75■■□□□ 1.23
PTCD3-220ENST00000627371 ERMNQ8TAM6 284 aa22.75■■□□□ 1.23
PTCD3-220ENST00000627371 FTOQ9C0B1 505 aaKnown RBP eCLIP22.75■■□□□ 1.23
PTCD3-220ENST00000627371 PCDHA2Q9Y5H9 948 aa22.75■■□□□ 1.23
PTCD3-220ENST00000627371 RANBP2P49792 3224 aaKnown RBP22.75■■□□□ 1.23
PTCD3-220ENST00000627371 LYPLA2O95372 231 aa22.74■■□□□ 1.23
PTCD3-220ENST00000627371 SELPP16109 830 aa22.74■■□□□ 1.23
PTCD3-220ENST00000627371 KLRC1P26715 233 aa22.74■■□□□ 1.23
PTCD3-220ENST00000627371 CCL23P55773 120 aa22.74■■□□□ 1.23
PTCD3-220ENST00000627371 FPGSQ05932 587 aa22.74■■□□□ 1.23
PTCD3-220ENST00000627371 TARBP2Q15633 366 aaKnown RBP22.74■■□□□ 1.23
PTCD3-220ENST00000627371 FOXD4L5Q5VV16 416 aaPredicted RBP22.74■■□□□ 1.23
PTCD3-220ENST00000627371 HAUS3Q68CZ6 603 aa22.74■■□□□ 1.23
PTCD3-220ENST00000627371 ANO5Q75V66 913 aa22.74■■□□□ 1.23
PTCD3-220ENST00000627371 RPAINQ86UA6 219 aa22.74■■□□□ 1.23
PTCD3-220ENST00000627371 TPH2Q8IWU9 490 aa22.74■■□□□ 1.23
PTCD3-220ENST00000627371 TET1Q8NFU7 2136 aa22.74■■□□□ 1.23
PTCD3-220ENST00000627371 FOXD4L4Q8WXT5 416 aaPredicted RBP22.74■■□□□ 1.23
PTCD3-220ENST00000627371 ZBTB10Q96DT7 871 aa22.74■■□□□ 1.23
PTCD3-220ENST00000627371 POLR3CQ9BUI4 534 aaPredicted RBP22.74■■□□□ 1.23
PTCD3-220ENST00000627371 TUFT1Q9NNX1 390 aa22.74■■□□□ 1.23
PTCD3-220ENST00000627371 LRWD1Q9UFC0 647 aa22.74■■□□□ 1.23
PTCD3-220ENST00000627371 CLIC4Q9Y696 253 aa22.74■■□□□ 1.23
PTCD3-220ENST00000627371 TMEM150BA6NC51 233 aa22.73■■□□□ 1.23
PTCD3-220ENST00000627371 DDX11L8A8MPP1 907 aa22.73■■□□□ 1.23
PTCD3-220ENST00000627371 C22orf31O95567 290 aa22.73■■□□□ 1.23
PTCD3-220ENST00000627371 RPLP2P05387 115 aaKnown RBP22.73■■□□□ 1.23
PTCD3-220ENST00000627371 IQCF3P0C7M6 154 aa22.73■■□□□ 1.23
PTCD3-220ENST00000627371 SPATA31C1P0DKV0 1188 aa22.73■■□□□ 1.23
PTCD3-220ENST00000627371 YWHABP31946 246 aaKnown RBP22.73■■□□□ 1.23
PTCD3-220ENST00000627371 BMP8BP34820 402 aa22.73■■□□□ 1.23
PTCD3-220ENST00000627371 THPOP40225 353 aa22.73■■□□□ 1.23
PTCD3-220ENST00000627371 PPIGQ13427 754 aaKnown RBP eCLIP22.73■■□□□ 1.238e-10■□□□□ 9.5
PTCD3-220ENST00000627371 PTPAQ15257 358 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms