RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 HSD17B4P51659 736 aa7.36□□□□□ -1.23
TCF4-249ENST00000625716 NKX3-2P78367 333 aa7.36□□□□□ -1.23
TCF4-249ENST00000625716 EXOSC10Q01780 885 aaKnown RBP7.36□□□□□ -1.23
TCF4-249ENST00000625716 KCNV1Q6PIU1 500 aa7.36□□□□□ -1.23
TCF4-249ENST00000625716 BLOC1S2Q6QNY1 142 aa7.36□□□□□ -1.23
TCF4-249ENST00000625716 CXCL17Q6UXB2 119 aa7.36□□□□□ -1.23
TCF4-249ENST00000625716 ANKRD33Q7Z3H0 272 aa7.36□□□□□ -1.23
TCF4-249ENST00000625716 SGMS1Q86VZ5 419 aa7.36□□□□□ -1.23
TCF4-249ENST00000625716 RAB11FIP4Q86YS3 637 aa7.36□□□□□ -1.23
TCF4-249ENST00000625716 TDHQ8IZJ6 230 aa7.36□□□□□ -1.23
TCF4-249ENST00000625716 CCDC82Q8N4S0 544 aa7.36□□□□□ -1.23
TCF4-249ENST00000625716 TCEANC2Q96MN5 208 aa7.36□□□□□ -1.23
TCF4-249ENST00000625716 PDLIM7Q9NR12 457 aa7.36□□□□□ -1.23
TCF4-249ENST00000625716 HCN2Q9UL51 889 aa7.36□□□□□ -1.23
TCF4-249ENST00000625716 MRVI1Q9Y6F6 885 aa7.36□□□□□ -1.23
TCF4-249ENST00000625716 TNRC18O15417 2968 aaPredicted RBP7.36□□□□□ -1.23
TCF4-249ENST00000625716 FRMPD3Q5JV73 1810 aa7.36□□□□□ -1.23
TCF4-249ENST00000625716 KLF18A0A0U1RQI7 1052 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 CCDC196A0A1B0GTZ2 297 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 TRIM43BA6NCK2 446 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 GOLGA8AA7E2F4 631 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 GOLGA8BA8MQT2 603 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 SHISA8B8ZZ34 492 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 CTAGE5O15320 804 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 EPB41L2O43491 1005 aaKnown RBP7.35□□□□□ -1.23
TCF4-249ENST00000625716 PLEKHA8P1O95397 391 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 SUPT20HL2P0C7V6 817 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 CASTP20810 708 aaKnown RBP7.35□□□□□ -1.23
TCF4-249ENST00000625716 HSPA4P34932 840 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 CHMP4BP1P59074 171 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 GHRHRQ02643 423 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 FAAP100Q0VG06 881 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 ITGA7Q13683 1181 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 PGM5Q15124 567 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 RTN1Q16799 776 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 LY6KQ17RY6 165 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 ADCK5Q3MIX3 580 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 GNPTABQ3T906 1256 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 FAM47CQ5HY64 1035 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 TMEM63BQ5T3F8 832 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 APOA5Q6Q788 366 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 Q6ZUG5 572 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 TMTC3Q6ZXV5 915 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 HEATR3Q7Z4Q2 680 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 DHX37Q8IY37 1157 aaKnown RBP7.35□□□□□ -1.23
TCF4-249ENST00000625716 ZNF295-AS1Q8N0V1 137 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 CMTR1Q8N1G2 835 aaKnown RBP7.35□□□□□ -1.23
TCF4-249ENST00000625716 SRBD1Q8N5C6 995 aaKnown RBP7.35□□□□□ -1.23
TCF4-249ENST00000625716 RHBDD1Q8TEB9 315 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 BADQ92934 168 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 TRIM43Q96BQ3 446 aaPredicted RBP7.35□□□□□ -1.23
TCF4-249ENST00000625716 PDCD2LQ9BRP1 358 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 MTG1Q9BT17 334 aaPredicted RBP7.35□□□□□ -1.23
TCF4-249ENST00000625716 OXCT2Q9BYC2 517 aaPredicted RBP7.35□□□□□ -1.23
TCF4-249ENST00000625716 PRO3102Q9H379 93 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 PSTPIP2Q9H939 334 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 EHMT1Q9H9B1 1298 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 PRM3Q9NNZ6 103 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 COL20A1Q9P218 1284 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 SNX14Q9Y5W7 946 aa7.35□□□□□ -1.23
TCF4-249ENST00000625716 hCG_1642624A0A1W2PR95 340 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 A6NJR5 290 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 SPDYE3A6NKU9 549 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 PIK3CDO00329 1044 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 OPLAHO14841 1288 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 KIAA0355O15063 1070 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 BNIP3LO60238 219 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 STAM2O75886 525 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 TIMP1P01033 207 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 PTGS1P23219 599 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 METAP2P50579 478 aaKnown RBP eCLIP7.34□□□□□ -1.23
TCF4-249ENST00000625716 CDK7P50613 346 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 FXR1P51114 621 aaKnown RBP eCLIP7.34□□□□□ -1.23
TCF4-249ENST00000625716 RCAN1P53805 252 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 PSMC6P62333 389 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 SNRPNP63162 240 aaKnown RBP7.34□□□□□ -1.23
TCF4-249ENST00000625716 AKAP17AQ02040 695 aaKnown RBP7.34□□□□□ -1.23
TCF4-249ENST00000625716 FPGSQ05932 587 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 LAMC2Q13753 1193 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 MCM6Q14566 821 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 TLR1Q15399 786 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 SLC35G1Q2M3R5 365 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 VSIG10LQ86VR7 867 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 TMEM199Q8N511 208 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 PLPP7Q8NBV4 271 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 COPS5Q92905 334 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 KCNB2Q92953 911 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 BRF1Q92994 677 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 MLXIPQ9HAP2 919 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 DNAAF2Q9NVR5 837 aaKnown RBP7.34□□□□□ -1.23
TCF4-249ENST00000625716 BRPF3Q9ULD4 1205 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 NOD1Q9Y239 953 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 CYP46A1Q9Y6A2 500 aa7.34□□□□□ -1.23
TCF4-249ENST00000625716 hCG_1984214I3L0E3 225 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 ARIH2O95376 493 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 TGFB3P10600 412 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 CPA1P15085 419 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 HOXB4P17483 251 aaPredicted RBP7.33□□□□□ -1.24
TCF4-249ENST00000625716 RPS6KB1P23443 525 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 MAP2K3P46734 347 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms