RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 IPO9Q96P70 1041 aaKnown RBP22.6■■□□□ 1.21
R3HCC1-210ENST00000625275 ANO3Q9BYT9 981 aa22.6■■□□□ 1.21
R3HCC1-210ENST00000625275 REV3LO60673 3130 aa22.59■■□□□ 1.21
R3HCC1-210ENST00000625275 NRCAMQ92823 1304 aa22.59■■□□□ 1.21
R3HCC1-210ENST00000625275 GSTTP1A0A1W2PQM5 241 aa22.59■■□□□ 1.21
R3HCC1-210ENST00000625275 LCHNA4D1U4 455 aa22.59■■□□□ 1.21
R3HCC1-210ENST00000625275 RBAK-RBAKDNI3L0D1 243 aa22.59■■□□□ 1.21
R3HCC1-210ENST00000625275 RFXAPO00287 272 aa22.59■■□□□ 1.21
R3HCC1-210ENST00000625275 FOSP01100 380 aaPredicted RBP22.59■■□□□ 1.21
R3HCC1-210ENST00000625275 PLEKHG4Q58EX7 1191 aa22.59■■□□□ 1.21
R3HCC1-210ENST00000625275 MICALL1Q8N3F8 863 aa22.59■■□□□ 1.21
R3HCC1-210ENST00000625275 MXRA8Q9BRK3 442 aa22.59■■□□□ 1.21
R3HCC1-210ENST00000625275 FOXP1Q9H334 677 aaPredicted RBP22.59■■□□□ 1.21
R3HCC1-210ENST00000625275 MTMR6Q9Y217 621 aa22.59■■□□□ 1.21
R3HCC1-210ENST00000625275 GTPBP6O43824 516 aaPredicted RBP22.58■■□□□ 1.2
R3HCC1-210ENST00000625275 POU3F3P20264 500 aaPredicted RBP22.58■■□□□ 1.2
R3HCC1-210ENST00000625275 MKRN4PQ13434 485 aaPredicted RBP22.58■■□□□ 1.2
R3HCC1-210ENST00000625275 PKP1Q13835 747 aa22.58■■□□□ 1.2
R3HCC1-210ENST00000625275 EARS2Q5JPH6 523 aaKnown RBP22.58■■□□□ 1.2
R3HCC1-210ENST00000625275 MCTP2Q6DN12 878 aa22.58■■□□□ 1.2
R3HCC1-210ENST00000625275 JPH1Q9HDC5 661 aaPredicted RBP22.58■■□□□ 1.2
R3HCC1-210ENST00000625275 KCNH7Q9NS40 1196 aa22.58■■□□□ 1.2
R3HCC1-210ENST00000625275 ERAP1Q9NZ08 941 aa22.58■■□□□ 1.2
R3HCC1-210ENST00000625275 U2AF2P26368 475 aaKnown RBP eCLIP22.57■■□□□ 1.2
R3HCC1-210ENST00000625275 DDIT3P35638 169 aa22.57■■□□□ 1.2
R3HCC1-210ENST00000625275 PPFIA1Q13136 1202 aa22.57■■□□□ 1.2
R3HCC1-210ENST00000625275 MCTP1Q6DN14 999 aa22.57■■□□□ 1.2
R3HCC1-210ENST00000625275 KRT25Q7Z3Z0 450 aa22.57■■□□□ 1.2
R3HCC1-210ENST00000625275 SPRED2Q7Z698 418 aa22.57■■□□□ 1.2
R3HCC1-210ENST00000625275 ATXN2LQ8WWM7 1075 aaKnown RBP22.57■■□□□ 1.2
R3HCC1-210ENST00000625275 GLG1Q92896 1179 aa22.57■■□□□ 1.2
R3HCC1-210ENST00000625275 RAD9AQ99638 391 aa22.57■■□□□ 1.2
R3HCC1-210ENST00000625275 MTCH2Q9Y6C9 303 aa22.57■■□□□ 1.2
R3HCC1-210ENST00000625275 CCDC194A0A1B0GVG4 234 aa22.56■■□□□ 1.2
R3HCC1-210ENST00000625275 FAM205CA6NFA0 338 aa22.56■■□□□ 1.2
R3HCC1-210ENST00000625275 AMHP03971 560 aa22.56■■□□□ 1.2
R3HCC1-210ENST00000625275 MARK3P27448 753 aa22.56■■□□□ 1.2
R3HCC1-210ENST00000625275 GNL2Q13823 731 aaKnown RBP22.56■■□□□ 1.2
R3HCC1-210ENST00000625275 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.56■■□□□ 1.2
R3HCC1-210ENST00000625275 PIK3AP1Q6ZUJ8 805 aa22.56■■□□□ 1.2
R3HCC1-210ENST00000625275 SEPT8Q92599 483 aa22.56■■□□□ 1.2
R3HCC1-210ENST00000625275 SMARCAD1Q9H4L7 1026 aa22.56■■□□□ 1.2
R3HCC1-210ENST00000625275 SLC9A2Q9UBY0 812 aa22.56■■□□□ 1.2
R3HCC1-210ENST00000625275 TTC3P53804 2025 aa22.56■■□□□ 1.2
R3HCC1-210ENST00000625275 SREBF1P36956 1147 aa22.55■■□□□ 1.2
R3HCC1-210ENST00000625275 NONOQ15233 471 aaKnown RBP eCLIP22.55■■□□□ 1.2
R3HCC1-210ENST00000625275 CEP55Q53EZ4 464 aa22.55■■□□□ 1.2
R3HCC1-210ENST00000625275 FAM26DQ5JW98 314 aa22.55■■□□□ 1.2
R3HCC1-210ENST00000625275 FAM117BQ6P1L5 589 aa22.55■■□□□ 1.2
R3HCC1-210ENST00000625275 TAF2Q6P1X5 1199 aa22.55■■□□□ 1.2
R3HCC1-210ENST00000625275 NOSTRINQ8IVI9 506 aa22.55■■□□□ 1.2
R3HCC1-210ENST00000625275 CYP2W1Q8TAV3 490 aa22.55■■□□□ 1.2
R3HCC1-210ENST00000625275 CRYGNQ8WXF5 182 aa22.55■■□□□ 1.2
R3HCC1-210ENST00000625275 TSPYL2Q9H2G4 693 aaPredicted RBP22.55■■□□□ 1.2
R3HCC1-210ENST00000625275 NFASCO94856 1347 aa22.55■■□□□ 1.2
R3HCC1-210ENST00000625275 COL4A6Q14031 1691 aa22.55■■□□□ 1.2
R3HCC1-210ENST00000625275 MYH15Q9Y2K3 1946 aa22.55■■□□□ 1.2
R3HCC1-210ENST00000625275 PDIA4P13667 645 aaKnown RBP22.54■■□□□ 1.2
R3HCC1-210ENST00000625275 GRIK4Q16099 956 aa22.54■■□□□ 1.2
R3HCC1-210ENST00000625275 FERMT3Q86UX7 667 aa22.54■■□□□ 1.2
R3HCC1-210ENST00000625275 MYOCDQ8IZQ8 938 aa22.54■■□□□ 1.2
R3HCC1-210ENST00000625275 TBCKQ8TEA7 893 aa22.54■■□□□ 1.2
R3HCC1-210ENST00000625275 SDF4Q9BRK5 362 aa22.54■■□□□ 1.2
R3HCC1-210ENST00000625275 OSBPL7Q9BZF2 842 aa22.54■■□□□ 1.2
R3HCC1-210ENST00000625275 TUBE1Q9UJT0 475 aa22.54■■□□□ 1.2
R3HCC1-210ENST00000625275 LINC01553A4QN01 128 aa22.54■■□□□ 1.2
R3HCC1-210ENST00000625275 GRB10Q13322 594 aa22.54■■□□□ 1.2
R3HCC1-210ENST00000625275 INF2Q27J81 1249 aa22.54■■□□□ 1.2
R3HCC1-210ENST00000625275 RUFY4Q6ZNE9 571 aa22.54■■□□□ 1.2
R3HCC1-210ENST00000625275 RPAINQ86UA6 219 aa22.54■■□□□ 1.2
R3HCC1-210ENST00000625275 ATG2AQ2TAZ0 1938 aa22.53■■□□□ 1.2
R3HCC1-210ENST00000625275 MBLAC1A4D2B0 266 aaPredicted RBP22.53■■□□□ 1.2
R3HCC1-210ENST00000625275 ARP10275 920 aa22.53■■□□□ 1.2
R3HCC1-210ENST00000625275 MRPS5P82675 430 aaKnown RBP22.53■■□□□ 1.2
R3HCC1-210ENST00000625275 APBB2Q92870 758 aa22.53■■□□□ 1.2
R3HCC1-210ENST00000625275 ASB2Q96Q27 587 aa22.53■■□□□ 1.2
R3HCC1-210ENST00000625275 TGS1Q96RS0 853 aaKnown RBP22.53■■□□□ 1.2
R3HCC1-210ENST00000625275 PCYT2Q99447 389 aa22.53■■□□□ 1.2
R3HCC1-210ENST00000625275 AZI2Q9H6S1 392 aa22.53■■□□□ 1.2
R3HCC1-210ENST00000625275 AGO4Q9HCK5 861 aaKnown RBP22.53■■□□□ 1.2
R3HCC1-210ENST00000625275 INSL6Q9Y581 213 aa22.53■■□□□ 1.2
R3HCC1-210ENST00000625275 SPTBN5Q9NRC6 3674 aaKnown RBP22.53■■□□□ 1.2
R3HCC1-210ENST00000625275 MEIS1O00470 390 aa22.52■■□□□ 1.2
R3HCC1-210ENST00000625275 EDIL3O43854 480 aa22.52■■□□□ 1.2
R3HCC1-210ENST00000625275 LPXNO60711 386 aa22.52■■□□□ 1.2
R3HCC1-210ENST00000625275 ZSCAN22P10073 491 aaPredicted RBP22.52■■□□□ 1.2
R3HCC1-210ENST00000625275 ACTR2P61160 394 aa22.52■■□□□ 1.2
R3HCC1-210ENST00000625275 ERVK-21P61565 698 aa22.52■■□□□ 1.2
R3HCC1-210ENST00000625275 ITGB3BPQ13352 177 aaPredicted RBP22.52■■□□□ 1.2
R3HCC1-210ENST00000625275 RSPH3Q86UC2 560 aa22.52■■□□□ 1.2
R3HCC1-210ENST00000625275 GDPD5Q8WTR4 605 aa22.52■■□□□ 1.2
R3HCC1-210ENST00000625275 IFIH1Q9BYX4 1025 aaKnown RBP22.52■■□□□ 1.2
R3HCC1-210ENST00000625275 KIAA1671Q9BY89 1806 aa22.51■■□□□ 1.19
R3HCC1-210ENST00000625275 CHRNA1P02708 482 aa22.51■■□□□ 1.19
R3HCC1-210ENST00000625275 ZNF76P36508 570 aa22.51■■□□□ 1.19
R3HCC1-210ENST00000625275 HTRA4P83105 476 aaPredicted RBP22.51■■□□□ 1.19
R3HCC1-210ENST00000625275 RESTQ13127 1097 aa22.51■■□□□ 1.19
R3HCC1-210ENST00000625275 SKIV2LQ15477 1246 aaKnown RBP22.51■■□□□ 1.19
R3HCC1-210ENST00000625275 MARCH8Q5T0T0 291 aa22.51■■□□□ 1.19
R3HCC1-210ENST00000625275 FOXD4L5Q5VV16 416 aaPredicted RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms