RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 SIRT5Q9NXA8 310 aa4.62□□□□□ -1.67
CDKL5-208ENST00000624953 NUDT5Q9UKK9 219 aa4.62□□□□□ -1.67
CDKL5-208ENST00000624953 SIT1Q9Y3P8 196 aa4.62□□□□□ -1.67
CDKL5-208ENST00000624953 PCDHA2Q9Y5H9 948 aa4.62□□□□□ -1.67
CDKL5-208ENST00000624953 PTCH2Q9Y6C5 1203 aa4.62□□□□□ -1.67
CDKL5-208ENST00000624953 KANK1Q14678 1352 aa4.62□□□□□ -1.67
CDKL5-208ENST00000624953 PTCH1Q13635 1447 aa4.62□□□□□ -1.67
CDKL5-208ENST00000624953 RALGAPBQ86X10 1494 aa4.62□□□□□ -1.67
CDKL5-208ENST00000624953 SLIT2O94813 1529 aa4.62□□□□□ -1.67
CDKL5-208ENST00000624953 KIF1AQ12756 1690 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 ALS2Q96Q42 1657 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.61□□□□□ -1.67
CDKL5-208ENST00000624953 A0A1W2PQ27 194 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 A0A1W2PQ64 194 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 A0A1W2PQC6 194 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 A0A1W2PQD8 194 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 TCRBV5S2A0A599 114 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 TCAF2A6NFQ2 919 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 NPIPB6E9PJ23 425 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 MYO1BO43795 1136 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 PLA2G1BP04054 148 aaKnown RBP4.61□□□□□ -1.67
CDKL5-208ENST00000624953 C8BP07358 591 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 EPHA5P54756 1037 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 GABREP78334 506 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 CACNB2Q08289 660 aaPredicted RBP4.61□□□□□ -1.67
CDKL5-208ENST00000624953 TARBP2Q15633 366 aaKnown RBP4.61□□□□□ -1.67
CDKL5-208ENST00000624953 CABP7Q86V35 215 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 FAM126BQ8IXS8 530 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 TP53I13Q8NBR0 393 aaPredicted RBP4.61□□□□□ -1.67
CDKL5-208ENST00000624953 UHMK1Q8TAS1 419 aaKnown RBP4.61□□□□□ -1.67
CDKL5-208ENST00000624953 TMEM169Q96HH4 297 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 MRPL4Q9BYD3 311 aaKnown RBP4.61□□□□□ -1.67
CDKL5-208ENST00000624953 EPB41L1Q9H4G0 881 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 KANSL2Q9H9L4 492 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 TRIM39Q9HCM9 518 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 SLC52A1Q9NWF4 448 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 KCTD3Q9Y597 815 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 NCANO14594 1321 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 PRAG1Q86YV5 1406 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 ANKRD50Q9ULJ7 1429 aa4.61□□□□□ -1.67
CDKL5-208ENST00000624953 TCRBV5S4A2TA0A5A2 114 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 SH3D21A4FU49 640 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 B8ZZF3 427 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 PRRG2O14669 202 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 NCAM1P13591 858 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 ATF3P18847 181 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 GRK2P25098 689 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 GRK3P35626 688 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 CR1LQ2VPA4 569 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 DPH6Q7L8W6 267 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 OTOP3Q7RTS5 596 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 DEFB132Q7Z7B7 95 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 PROSER1Q86XN7 944 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 IFNL3Q8IZI9 196 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 PCDH19Q8TAB3 1148 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 SLC7A14Q8TBB6 771 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 PMFBP1Q8TBY8 1022 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 PHOSPHO1Q8TCT1 267 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 PANK1Q8TE04 598 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 SH3RF2Q8TEC5 729 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 LRRC59Q96AG4 307 aaKnown RBP4.6□□□□□ -1.67
CDKL5-208ENST00000624953 SCLYQ96I15 445 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 ORAI2Q96SN7 254 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 SLC52A2Q9HAB3 445 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 RXFP1Q9HBX9 757 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 NCOA5Q9HCD5 579 aaKnown RBP4.6□□□□□ -1.67
CDKL5-208ENST00000624953 SLC6A20Q9NP91 592 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 ASH2LQ9UBL3 628 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 PALD1Q9ULE6 856 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 WASF3Q9UPY6 502 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 ANKRD30AQ9BXX3 1397 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 BLMP54132 1417 aaPredicted RBP4.6□□□□□ -1.67
CDKL5-208ENST00000624953 CASZ1Q86V15 1759 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 WNK3Q9BYP7 1800 aa4.6□□□□□ -1.67
CDKL5-208ENST00000624953 CCDC85CA6NKD9 419 aa4.59□□□□□ -1.67
CDKL5-208ENST00000624953 AQP7O14520 342 aa4.59□□□□□ -1.67
CDKL5-208ENST00000624953 HGSO14964 777 aaPredicted RBP4.59□□□□□ -1.67
CDKL5-208ENST00000624953 BUB1BO60566 1050 aaPredicted RBP4.59□□□□□ -1.67
CDKL5-208ENST00000624953 CKMP06732 381 aa4.59□□□□□ -1.67
CDKL5-208ENST00000624953 PI3P19957 117 aa4.59□□□□□ -1.67
CDKL5-208ENST00000624953 MC3RP41968 323 aa4.59□□□□□ -1.67
CDKL5-208ENST00000624953 NCKAP1LP55160 1127 aa4.59□□□□□ -1.67
CDKL5-208ENST00000624953 PRR31Q5SQ13 230 aa4.59□□□□□ -1.67
CDKL5-208ENST00000624953 TTLL10Q6ZVT0 673 aa4.59□□□□□ -1.67
CDKL5-208ENST00000624953 SAPCD2Q86UD0 394 aa4.59□□□□□ -1.67
CDKL5-208ENST00000624953 ZSCAN18Q8TBC5 510 aaPredicted RBP4.59□□□□□ -1.67
CDKL5-208ENST00000624953 FNIP1Q8TF40 1166 aa4.59□□□□□ -1.67
CDKL5-208ENST00000624953 TRMT2BQ96GJ1 504 aaKnown RBP4.59□□□□□ -1.67
CDKL5-208ENST00000624953 RNPC3Q96LT9 517 aaKnown RBP4.59□□□□□ -1.67
CDKL5-208ENST00000624953 SMOC1Q9H4F8 434 aa4.59□□□□□ -1.67
CDKL5-208ENST00000624953 CLDND1Q9NY35 253 aa4.59□□□□□ -1.67
CDKL5-208ENST00000624953 TRAF6Q9Y4K3 522 aa4.59□□□□□ -1.67
CDKL5-208ENST00000624953 TELO2Q9Y4R8 837 aa4.59□□□□□ -1.67
CDKL5-208ENST00000624953 IRAK3Q9Y616 596 aa4.59□□□□□ -1.67
CDKL5-208ENST00000624953 CEP350Q5VT06 3117 aa4.59□□□□□ -1.68
CDKL5-208ENST00000624953 PHRF1Q9P1Y6 1649 aaKnown RBP4.58□□□□□ -1.68
CDKL5-208ENST00000624953 PLD2O14939 933 aa4.58□□□□□ -1.68
CDKL5-208ENST00000624953 RFPL3O75679 317 aa4.58□□□□□ -1.68
CDKL5-208ENST00000624953 LRG1P02750 347 aa4.58□□□□□ -1.68
CDKL5-208ENST00000624953 SOD2P04179 222 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms