RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 NUCKS1Q9H1E3 243 aaKnown RBP16.51■□□□□ 0.23
PMS1-221ENST00000624204 MYMKA6NI61 221 aa16.5■□□□□ 0.23
PMS1-221ENST00000624204 CCDC169A6NNP5 214 aa16.5■□□□□ 0.23
PMS1-221ENST00000624204 CCDC188H7C350 402 aa16.5■□□□□ 0.23
PMS1-221ENST00000624204 OR52Z1P0C646 297 aa16.5■□□□□ 0.23
PMS1-221ENST00000624204 NAF1Q96HR8 494 aaKnown RBP16.5■□□□□ 0.23
PMS1-221ENST00000624204 PLA2G12BQ9BX93 195 aa16.5■□□□□ 0.23
PMS1-221ENST00000624204 FLT1P17948 1338 aa16.5■□□□□ 0.23
PMS1-221ENST00000624204 RAD21O60216 631 aa16.5■□□□□ 0.23
PMS1-221ENST00000624204 GNAT1P11488 350 aa16.5■□□□□ 0.23
PMS1-221ENST00000624204 ATP4AP20648 1035 aa16.5■□□□□ 0.23
PMS1-221ENST00000624204 SLC29A2Q14542 456 aa16.5■□□□□ 0.23
PMS1-221ENST00000624204 IFI16Q16666 785 aaKnown RBP16.5■□□□□ 0.23
PMS1-221ENST00000624204 IFT74Q96LB3 600 aa16.5■□□□□ 0.23
PMS1-221ENST00000624204 PCDHA6Q9UN73 950 aa16.5■□□□□ 0.23
PMS1-221ENST00000624204 SNX24Q9Y343 169 aa16.5■□□□□ 0.23
PMS1-221ENST00000624204 PCDHA8Q9Y5H6 950 aa16.5■□□□□ 0.23
PMS1-221ENST00000624204 CHD4Q14839 1912 aa16.5■□□□□ 0.23
PMS1-221ENST00000624204 PDE6CP51160 858 aa16.5■□□□□ 0.23
PMS1-221ENST00000624204 PMS2P54278 862 aa16.5■□□□□ 0.23
PMS1-221ENST00000624204 COPS2P61201 443 aa16.5■□□□□ 0.23
PMS1-221ENST00000624204 PTK2Q05397 1052 aa16.5■□□□□ 0.23
PMS1-221ENST00000624204 NUGGCQ68CJ6 796 aa16.5■□□□□ 0.23
PMS1-221ENST00000624204 SPIRE2Q8WWL2 714 aa16.5■□□□□ 0.23
PMS1-221ENST00000624204 GLG1Q92896 1179 aa16.5■□□□□ 0.23
PMS1-221ENST00000624204 PAPOLBQ9NRJ5 636 aaKnown RBP16.5■□□□□ 0.23
PMS1-221ENST00000624204 NR2E1Q9Y466 385 aa16.5■□□□□ 0.23
PMS1-221ENST00000624204 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.5■□□□□ 0.23
PMS1-221ENST00000624204 GOLGB1Q14789 3259 aaKnown RBP16.49■□□□□ 0.23
PMS1-221ENST00000624204 SNX3O60493 162 aa16.49■□□□□ 0.23
PMS1-221ENST00000624204 HIP1RO75146 1068 aa16.49■□□□□ 0.23
PMS1-221ENST00000624204 KRT13P13646 458 aa16.49■□□□□ 0.23
PMS1-221ENST00000624204 MMP13P45452 471 aa16.49■□□□□ 0.23
PMS1-221ENST00000624204 TCERG1LQ5VWI1 586 aa16.49■□□□□ 0.23
PMS1-221ENST00000624204 LRRC55Q6ZSA7 311 aa16.49■□□□□ 0.23
PMS1-221ENST00000624204 GDAP1Q8TB36 358 aa16.49■□□□□ 0.23
PMS1-221ENST00000624204 MAGEF1Q9HAY2 307 aa16.49■□□□□ 0.23
PMS1-221ENST00000624204 ADAM22Q9P0K1 906 aa16.49■□□□□ 0.23
PMS1-221ENST00000624204 DBR1Q9UK59 544 aaKnown RBP16.49■□□□□ 0.23
PMS1-221ENST00000624204 ZBTB12Q9Y330 459 aaPredicted RBP16.49■□□□□ 0.23
PMS1-221ENST00000624204 USP15Q9Y4E8 981 aaPredicted RBP16.49■□□□□ 0.23
PMS1-221ENST00000624204 COL4A3BPQ9Y5P4 624 aa16.49■□□□□ 0.23
PMS1-221ENST00000624204 DPPA5A6NC42 116 aa16.49■□□□□ 0.23
PMS1-221ENST00000624204 TMEM110-MUSTN1A8MSY1 372 aa16.49■□□□□ 0.23
PMS1-221ENST00000624204 TCP11X1B4DZS4 312 aa16.49■□□□□ 0.23
PMS1-221ENST00000624204 ABCB4P21439 1286 aa16.49■□□□□ 0.23
PMS1-221ENST00000624204 RNASELQ05823 741 aaKnown RBP16.49■□□□□ 0.23
PMS1-221ENST00000624204 ZNF211Q13398 564 aaPredicted RBP16.49■□□□□ 0.23
PMS1-221ENST00000624204 EPS8L3Q8TE67 593 aaKnown RBP16.49■□□□□ 0.23
PMS1-221ENST00000624204 ADAM7Q9H2U9 754 aa16.49■□□□□ 0.23
PMS1-221ENST00000624204 KCNK9Q9NPC2 374 aa16.49■□□□□ 0.23
PMS1-221ENST00000624204 STX8Q9UNK0 236 aa16.49■□□□□ 0.23
PMS1-221ENST00000624204 TJP1Q07157 1748 aa16.49■□□□□ 0.23
PMS1-221ENST00000624204 MYH2Q9UKX2 1941 aa16.49■□□□□ 0.23
PMS1-221ENST00000624204 SUN1O94901 812 aa16.48■□□□□ 0.23
PMS1-221ENST00000624204 CYP2D6P10635 497 aa16.48■□□□□ 0.23
PMS1-221ENST00000624204 PAPOLAP51003 745 aaKnown RBP16.48■□□□□ 0.23
PMS1-221ENST00000624204 NLRP10Q86W26 655 aa16.48■□□□□ 0.23
PMS1-221ENST00000624204 PPP1R12CQ9BZL4 782 aa16.48■□□□□ 0.23
PMS1-221ENST00000624204 EDEM3Q9BZQ6 932 aa16.48■□□□□ 0.23
PMS1-221ENST00000624204 UBA5Q9GZZ9 404 aa16.48■□□□□ 0.23
PMS1-221ENST00000624204 SLITRK6Q9H5Y7 841 aa16.48■□□□□ 0.23
PMS1-221ENST00000624204 KCNMB3Q9NPA1 279 aa16.48■□□□□ 0.23
PMS1-221ENST00000624204 STXBP3O00186 592 aa16.48■□□□□ 0.23
PMS1-221ENST00000624204 ACTN1P12814 892 aa16.48■□□□□ 0.23
PMS1-221ENST00000624204 SSR1P43307 286 aaKnown RBP16.48■□□□□ 0.23
PMS1-221ENST00000624204 RAB27AP51159 221 aa16.48■□□□□ 0.23
PMS1-221ENST00000624204 LRRC63Q05C16 580 aa16.48■□□□□ 0.23
PMS1-221ENST00000624204 ALKBH5Q6P6C2 394 aaKnown RBP16.48■□□□□ 0.23
PMS1-221ENST00000624204 TMED8Q6PL24 325 aaPredicted RBP16.48■□□□□ 0.23
PMS1-221ENST00000624204 GUF1Q8N442 669 aaKnown RBP16.48■□□□□ 0.23
PMS1-221ENST00000624204 CNKSR1Q969H4 720 aa16.48■□□□□ 0.23
PMS1-221ENST00000624204 CHORDC1Q9UHD1 332 aaPredicted RBP16.48■□□□□ 0.23
PMS1-221ENST00000624204 SCN11AQ9UI33 1791 aa16.48■□□□□ 0.23
PMS1-221ENST00000624204 LRRD1A4D1F6 860 aa16.48■□□□□ 0.23
PMS1-221ENST00000624204 SEMA3FQ13275 785 aa16.48■□□□□ 0.23
PMS1-221ENST00000624204 ADAM33Q9BZ11 813 aa16.48■□□□□ 0.23
PMS1-221ENST00000624204 RAB17Q9H0T7 212 aa16.48■□□□□ 0.23
PMS1-221ENST00000624204 PSMD2Q13200 908 aa16.47■□□□□ 0.23
PMS1-221ENST00000624204 UBAP2Q5T6F2 1119 aaKnown RBP16.47■□□□□ 0.23
PMS1-221ENST00000624204 RNF25Q96BH1 459 aaPredicted RBP16.47■□□□□ 0.23
PMS1-221ENST00000624204 PABPC3Q9H361 631 aaKnown RBP16.47■□□□□ 0.23
PMS1-221ENST00000624204 BCS1LQ9Y276 419 aa16.47■□□□□ 0.23
PMS1-221ENST00000624204 DAAM1Q9Y4D1 1078 aa16.47■□□□□ 0.23
PMS1-221ENST00000624204 USP54Q70EL1 1684 aa16.47■□□□□ 0.23
PMS1-221ENST00000624204 PPFIA2O75334 1257 aa16.47■□□□□ 0.23
PMS1-221ENST00000624204 ALADP13716 330 aa16.47■□□□□ 0.23
PMS1-221ENST00000624204 FGFR2P21802 821 aa16.47■□□□□ 0.23
PMS1-221ENST00000624204 FGFR4P22455 802 aa16.47■□□□□ 0.23
PMS1-221ENST00000624204 IGHMBP2P38935 993 aaKnown RBP16.47■□□□□ 0.23
PMS1-221ENST00000624204 RPS6KA3P51812 740 aa16.47■□□□□ 0.23
PMS1-221ENST00000624204 DR1Q01658 176 aa16.47■□□□□ 0.23
PMS1-221ENST00000624204 TRIM28Q13263 835 aaKnown RBP16.47■□□□□ 0.23
PMS1-221ENST00000624204 UNC13DQ70J99 1090 aa16.47■□□□□ 0.23
PMS1-221ENST00000624204 FBXO25Q8TCJ0 367 aa16.47■□□□□ 0.23
PMS1-221ENST00000624204 MRRFQ96E11 262 aaKnown RBP16.47■□□□□ 0.23
PMS1-221ENST00000624204 ANKRD33BA6NCL7 494 aa16.47■□□□□ 0.23
PMS1-221ENST00000624204 FKBP3Q00688 224 aaKnown RBP16.47■□□□□ 0.23
PMS1-221ENST00000624204 ZNF571Q7Z3V5 609 aaPredicted RBP16.47■□□□□ 0.23
PMS1-221ENST00000624204 TPCN2Q8NHX9 752 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms