RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 CNTNAP1P78357 1384 aa9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 SLC16A3O15427 465 aaKnown RBP9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 PLA2G6O60733 806 aa9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 RAD17O75943 681 aa9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 SLITRK3O94933 977 aa9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 NR3C1P04150 777 aa9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 XRCC5P13010 732 aaKnown RBP9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 CYP2C19P33261 490 aa9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 C2orf54Q08AI8 447 aa9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 KLHL30Q0D2K2 578 aa9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 CTTNQ14247 550 aaKnown RBP9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 SLC18A3Q16572 532 aa9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 FAM160B2Q86V87 743 aa9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 TPH2Q8IWU9 490 aa9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 RTKN2Q8IZC4 609 aa9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 MMGT1Q8N4V1 131 aa9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 ANKRD13CQ8N6S4 541 aa9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 GMLQ99445 158 aa9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 ACBD3Q9H3P7 528 aa9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 VCPKMTQ9H867 229 aa9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 PLCB1Q9NQ66 1216 aa9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 SALL4Q9UJQ4 1053 aa9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 TSKSQ9UJT2 592 aa9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 ASTN1O14525 1302 aa9.14□□□□□ -0.95
SND1-IT1-201ENST00000623342 TBC1D12O60347 775 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 AKAP3O75969 853 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 FAM13AO94988 1023 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 EPB41P11171 864 aaKnown RBP9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 MUTP22033 750 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 PRELPP51888 382 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 NAP1L1P55209 391 aaKnown RBP9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 FKBP1CQ5VVH2 108 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 NFRKBQ6P4R8 1299 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 TTLL6Q8N841 843 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 FAM133AQ8N9E0 248 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 PIGOQ8TEQ8 1089 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 COG1Q8WTW3 980 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 DYDC2Q96IM9 177 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 PSMD1Q99460 953 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 STK32BQ9NY57 414 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 SCAF8Q9UPN6 1271 aaKnown RBP9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 COL4A5P29400 1685 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 EIF3DO15371 548 aaKnown RBP eCLIP9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 CHMP2AO43633 222 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 BUB1O43683 1085 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 GAS7O60861 476 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 SLC9A1P19634 815 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 ARID5AQ03989 594 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 NAB2Q15742 525 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 EXOC3L4Q17RC7 722 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 CEP55Q53EZ4 464 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 CCDC181Q5TID7 509 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 KLHDC7AQ5VTJ3 777 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 DPY19L2P1Q6NXN4 242 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 C1orf186Q6ZWK4 172 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 LARGE2Q8N3Y3 721 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 VIPAS39Q9H9C1 493 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 VEZTQ9HBM0 779 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 FEM1BQ9UK73 627 aa9.13□□□□□ -0.95
SND1-IT1-201ENST00000623342 SMCHD1A6NHR9 2005 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 A0A087X0T9 212 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 LRRIQ3A6PVS8 624 aaPredicted RBP9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 SFI1A8K8P3 1242 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 FAM228BP0C875 321 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 ACTN1P12814 892 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 UCHL3P15374 230 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 PON1P27169 355 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 HOXD11P31277 338 aaPredicted RBP9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 UBXN2AP68543 259 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 SETQ01105 290 aaPredicted RBP9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 ZYXQ15942 572 aaKnown RBP9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 DCAF17Q5H9S7 520 aaPredicted RBP9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 SLC30A10Q6XR72 485 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 MYCT1Q8N699 235 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 SPATA4Q8NEY3 305 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 RUBCNQ92622 972 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 NACC1Q96RE7 527 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 TLR10Q9BXR5 811 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 WDR11Q9BZH6 1224 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 BCAS3Q9H6U6 928 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 PARVGQ9HBI0 331 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 POLD4Q9HCU8 107 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 ADAMTS1Q9UHI8 967 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 ZBTB12Q9Y330 459 aaPredicted RBP9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 BZW2Q9Y6E2 419 aaKnown RBP9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 CLIC2O15247 247 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 TGFB1I1O43294 461 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 NCK2O43639 380 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 CAP2P40123 477 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 PAFAH1B1P43034 410 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 CASP4P49662 377 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 KCNA1Q09470 495 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 EPHA7Q15375 998 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 NFIL3Q16649 462 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 HSP90B2PQ58FF3 399 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 C10orf76Q5T2E6 689 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 TCERG1LQ5VWI1 586 aa9.12□□□□□ -0.95
SND1-IT1-201ENST00000623342 CCNI2Q6ZMN8 369 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms