RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 UBA6A0AVT1 1052 aaPredicted RBP13.02□□□□□ -0.33
SLC6A6-210ENST00000622186 HSPA4LO95757 839 aa13.02□□□□□ -0.33
SLC6A6-210ENST00000622186 KRT8P05787 483 aa13.02□□□□□ -0.33
SLC6A6-210ENST00000622186 PPP6R3Q5H9R7 873 aaPredicted RBP13.02□□□□□ -0.33
SLC6A6-210ENST00000622186 MFN1Q8IWA4 741 aa13.02□□□□□ -0.33
SLC6A6-210ENST00000622186 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.02□□□□□ -0.339e-7■■■■■ 57.1
SLC6A6-210ENST00000622186 TSSK1BQ9BXA7 367 aa13.02□□□□□ -0.33
SLC6A6-210ENST00000622186 TMEM206Q9H813 350 aa13.02□□□□□ -0.33
SLC6A6-210ENST00000622186 KCNA6P17658 529 aa13.02□□□□□ -0.33
SLC6A6-210ENST00000622186 DDIT3P35638 169 aa13.02□□□□□ -0.33
SLC6A6-210ENST00000622186 SYDE2Q5VT97 1194 aa13.02□□□□□ -0.33
SLC6A6-210ENST00000622186 GTSE1Q9NYZ3 720 aa13.02□□□□□ -0.33
SLC6A6-210ENST00000622186 PCDHB8Q9UN66 801 aa13.02□□□□□ -0.33
SLC6A6-210ENST00000622186 SEMA3EO15041 775 aa13.02□□□□□ -0.33
SLC6A6-210ENST00000622186 LRRN2O75325 713 aa13.02□□□□□ -0.33
SLC6A6-210ENST00000622186 EIF2AK2P19525 551 aaKnown RBP13.02□□□□□ -0.33
SLC6A6-210ENST00000622186 CYP27A1Q02318 531 aa13.02□□□□□ -0.33
SLC6A6-210ENST00000622186 BEST2Q8NFU1 509 aa13.02□□□□□ -0.33
SLC6A6-210ENST00000622186 OLFML3Q9NRN5 406 aa13.02□□□□□ -0.33
SLC6A6-210ENST00000622186 SEL1LQ9UBV2 794 aa13.02□□□□□ -0.33
SLC6A6-210ENST00000622186 GSNP06396 782 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 KRT24Q2M2I5 525 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 ZNF341Q9BYN7 854 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 NGRNQ9NPE2 291 aaKnown RBP13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 SRPRBQ9Y5M8 271 aaKnown RBP13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 ORC4O43929 436 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 WBP4O75554 376 aaKnown RBP13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 EPB42P16452 691 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 TNFAIP2Q03169 654 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 CHRNDQ07001 517 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 SH3TC2Q8TF17 1288 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 MAGOHBQ96A72 148 aaKnown RBP13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 OTUD5Q96G74 571 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 PHACTR3Q96KR7 559 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 PCDHB9Q9Y5E1 797 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 AP1G2O75843 785 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 MED21Q13503 144 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 RMDN1Q96DB5 314 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 SMARCAD1Q9H4L7 1026 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 TEX14Q8IWB6 1497 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 CLIC2O15247 247 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 CCDC159P0C7I6 412 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 PYGBP11216 843 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 TRIM32Q13049 653 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 HDAC1Q13547 482 aaPredicted RBP13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 GALNT17Q6IS24 598 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 FOPNLQ96NB1 174 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 ARHGEF10O15013 1369 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 C2CD2LO14523 706 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 P4HA2O15460 535 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 SCG2P13521 617 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 HAUS6Q7Z4H7 955 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 ZSCAN18Q8TBC5 510 aaPredicted RBP13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 SERPINI1Q99574 410 aa13.01□□□□□ -0.33
SLC6A6-210ENST00000622186 C5orf58C9J3I9 102 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 CACNB1Q02641 598 aaPredicted RBP13□□□□□ -0.33
SLC6A6-210ENST00000622186 LLGL1Q15334 1064 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 GPATCH4Q5T3I0 446 aaKnown RBP13□□□□□ -0.33
SLC6A6-210ENST00000622186 ERO1AQ96HE7 468 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 CUEDC2Q9H467 287 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 SPON1Q9HCB6 807 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 FAM47E-STBD1D6RA91 191 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 SLC9A1P19634 815 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 PHKA2P46019 1235 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 RASGRF1Q13972 1273 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 MMP19Q99542 508 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 SPZ1Q9BXG8 430 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 MEIS1O00470 390 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 PRRG1O14668 218 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 IGHDP01880 384 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 GUCA1AP43080 201 aaPredicted RBP13□□□□□ -0.33
SLC6A6-210ENST00000622186 ASPRV1Q53RT3 343 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 ZNF667Q5HYK9 610 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 KBTBD3Q8NAB2 608 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 FAF2Q96CS3 445 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 FAM227BQ96M60 508 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 UBE2TQ9NPD8 197 aaPredicted RBP13□□□□□ -0.33
SLC6A6-210ENST00000622186 K7ERI5 159 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 PSMA2P25787 234 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 SLC27A3Q5K4L6 730 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 ERICH1Q86X53 443 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 ARHGAP18Q8N392 663 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 TTC8Q8TAM2 541 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 FAM129AQ9BZQ8 928 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 UBE3AQ05086 875 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 ANGPT1Q15389 498 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 ANKS6Q68DC2 871 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 TJP2Q9UDY2 1190 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 PCDHA5Q9Y5H7 936 aa13□□□□□ -0.33
SLC6A6-210ENST00000622186 GNGT1P63211 74 aa12.99□□□□□ -0.33
SLC6A6-210ENST00000622186 EN1Q05925 392 aaPredicted RBP12.99□□□□□ -0.33
SLC6A6-210ENST00000622186 BBS9Q3SYG4 887 aa12.99□□□□□ -0.33
SLC6A6-210ENST00000622186 ORAI2Q96SN7 254 aa12.99□□□□□ -0.33
SLC6A6-210ENST00000622186 GINM1Q9NU53 330 aa12.99□□□□□ -0.33
SLC6A6-210ENST00000622186 AKT1P31749 480 aa12.99□□□□□ -0.33
SLC6A6-210ENST00000622186 PPP3CCP48454 512 aa12.99□□□□□ -0.33
SLC6A6-210ENST00000622186 ADKP55263 362 aaKnown RBP12.99□□□□□ -0.33
SLC6A6-210ENST00000622186 TRIP13Q15645 432 aaPredicted RBP12.99□□□□□ -0.33
SLC6A6-210ENST00000622186 KANSL2Q9H9L4 492 aa12.99□□□□□ -0.33
SLC6A6-210ENST00000622186 SCINQ9Y6U3 715 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms