RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 IQCKQ8N0W5 287 aa12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 LZTS2Q9BRK4 669 aa12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 ZMYND12Q9H0C1 365 aa12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 TMBIM4Q9HC24 238 aa12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 CEP83Q9Y592 693 aa12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 CHN1P15882 459 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 MYCT1Q8N699 235 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 ERMNQ8TAM6 284 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 NEK9Q8TD19 979 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 CUL5Q93034 780 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 CHMP6Q96FZ7 201 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 PBKQ96KB5 322 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 BSDC1Q9NW68 430 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 DNM3Q9UQ16 869 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 ARFGEF2Q9Y6D5 1785 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 GNA14O95837 355 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 RPL13P26373 211 aaKnown RBP12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 SLC8A1P32418 973 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 ZNF844Q08AG5 666 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 SNX1Q13596 522 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 TRIP13Q15645 432 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 KIF2BQ8N4N8 673 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 KCNV2Q8TDN2 545 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 BAP1Q92560 729 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 RPGRQ92834 1020 aaKnown RBP12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 ANKRD2Q9GZV1 360 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 ISCUQ9H1K1 167 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 SRP68Q9UHB9 627 aaKnown RBP12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 TCEAL9Q9UHQ7 104 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 RTCBQ9Y3I0 505 aaKnown RBP12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 UFL1O94874 794 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 CDK17Q00537 523 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 ITGB3BPQ13352 177 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 BIRC3Q13489 604 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 PRMT1Q99873 361 aaKnown RBP12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 LBHD1Q9BQE6 289 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 NT5C3AQ9H0P0 336 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 GDF3Q9NR23 364 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 BLOC1S4Q9NUP1 217 aa12.39□□□□□ -0.43
PCDHGA11-203ENST00000622044 CAND2O75155 1236 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 UCHL3P15374 230 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 SCTRP47872 440 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 SMTNP53814 917 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 KCNMA1Q12791 1236 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 NKX1-1Q15270 411 aaPredicted RBP12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 SEL1L2Q5TEA6 688 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 NUGGCQ68CJ6 796 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 ZNF746Q6NUN9 644 aaPredicted RBP12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 TPTE2Q6XPS3 522 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 HS2ST1Q7LGA3 356 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 SFR1Q86XK3 245 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 WDR66Q8TBY9 1149 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 KLHL29Q96CT2 875 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 SGSM3Q96HU1 749 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 FAM167BQ9BTA0 163 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 OSGEPQ9NPF4 335 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 ZBTB21Q9ULJ3 1066 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 LEMD3Q9Y2U8 911 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 CCDC169A6NNP5 214 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 FSBPO95073 299 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 SEPT7Q16181 437 aaKnown RBP12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 MEI1Q5TIA1 1274 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 ZNF804AQ7Z570 1209 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 PHLDB2Q86SQ0 1253 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 PURBQ96QR8 312 aaKnown RBP12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 FAM114A2Q9NRY5 505 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 GNPATO15228 680 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 TLR2O60603 784 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 NTSR2O95665 410 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 MFSD14BQ5SR56 506 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 PPP4R3AQ6IN85 833 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 PTF1AQ7RTS3 328 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 ZNF571Q7Z3V5 609 aaPredicted RBP12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 TPH2Q8IWU9 490 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 FGFBP2Q9BYJ0 223 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 DBR1Q9UK59 544 aaKnown RBP12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 MYH2Q9UKX2 1941 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 NWD2Q9ULI1 1742 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 TPX2Q9ULW0 747 aaKnown RBP12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 L3MBTL1Q9Y468 752 aa12.38□□□□□ -0.43
PCDHGA11-203ENST00000622044 CALUO43852 315 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA11-203ENST00000622044 MYCNP04198 464 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA11-203ENST00000622044 LACTBP83111 547 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA11-203ENST00000622044 TTBK2Q6IQ55 1244 aa12.37□□□□□ -0.43
PCDHGA11-203ENST00000622044 PNMA5Q96PV4 448 aa12.37□□□□□ -0.43
PCDHGA11-203ENST00000622044 TRIM37O94972 964 aa12.37□□□□□ -0.43
PCDHGA11-203ENST00000622044 PLCG2P16885 1265 aa12.37□□□□□ -0.43
PCDHGA11-203ENST00000622044 TCP10Q12799 353 aa12.37□□□□□ -0.43
PCDHGA11-203ENST00000622044 VSIG1Q86XK7 387 aa12.37□□□□□ -0.43
PCDHGA11-203ENST00000622044 MMTAG2Q9BU76 263 aaKnown RBP12.37□□□□□ -0.43
PCDHGA11-203ENST00000622044 NEUROG2Q9H2A3 272 aa12.37□□□□□ -0.43
PCDHGA11-203ENST00000622044 BHMT2Q9H2M3 363 aa12.37□□□□□ -0.43
PCDHGA11-203ENST00000622044 SLIT3O75094 1523 aa12.37□□□□□ -0.43
PCDHGA11-203ENST00000622044 EXOC3O60645 756 aa12.37□□□□□ -0.43
PCDHGA11-203ENST00000622044 USP11P51784 963 aa12.37□□□□□ -0.43
PCDHGA11-203ENST00000622044 ITIH3Q06033 890 aa12.37□□□□□ -0.43
PCDHGA11-203ENST00000622044 SWT1Q5T5J6 900 aaKnown RBP12.37□□□□□ -0.43
PCDHGA11-203ENST00000622044 FUKQ8N0W3 1084 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms