RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 HEXIM2Q96MH2 286 aaKnown RBP10.03□□□□□ -0.8
GGA3-223ENST00000621870 HAUS4Q9H6D7 363 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 SEPT10Q9P0V9 454 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 NRBP1Q9UHY1 535 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 ZNF148Q9UQR1 794 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 ARHGEF37A1IGU5 675 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 CLUL1Q15846 466 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 OR6B2Q6IFH4 312 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 ARFGAP2Q8N6H7 521 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 RNF149Q8NC42 400 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 GPRC5AQ8NFJ5 357 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 RAB3IL1Q8TBN0 382 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 HINFPQ9BQA5 517 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 EIF2AK1Q9BQI3 630 aaKnown RBP10.03□□□□□ -0.8
GGA3-223ENST00000621870 A6NJR5 290 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 ABCD1P33897 745 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 LRRC63Q05C16 580 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 TSGA10IPQ3SY00 556 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 HOMEZQ8IX15 550 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 KRT222Q8N1A0 295 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 GABPB2Q8TAK5 448 aaPredicted RBP10.03□□□□□ -0.8
GGA3-223ENST00000621870 MTRQ99707 1265 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 FHDC1Q9C0D6 1143 aaPredicted RBP10.03□□□□□ -0.8
GGA3-223ENST00000621870 IL25Q9H293 177 aa10.03□□□□□ -0.8
GGA3-223ENST00000621870 KRIT1O00522 736 aa10.02□□□□□ -0.8
GGA3-223ENST00000621870 U2AF2P26368 475 aaKnown RBP eCLIP10.02□□□□□ -0.81e-9■■■□□ 18.3
GGA3-223ENST00000621870 MAN1A1P33908 653 aa10.02□□□□□ -0.8
GGA3-223ENST00000621870 ALCAMQ13740 583 aa10.02□□□□□ -0.8
GGA3-223ENST00000621870 GNASQ5JWF2 1037 aa10.02□□□□□ -0.8
GGA3-223ENST00000621870 CAPN12Q6ZSI9 719 aa10.02□□□□□ -0.8
GGA3-223ENST00000621870 MICALCLQ6ZW33 695 aa10.02□□□□□ -0.8
GGA3-223ENST00000621870 CEP57Q86XR8 500 aa10.02□□□□□ -0.8
GGA3-223ENST00000621870 SCN4BQ8IWT1 228 aa10.02□□□□□ -0.8
GGA3-223ENST00000621870 AKT1S1Q96B36 256 aa10.02□□□□□ -0.8
GGA3-223ENST00000621870 GBA2Q9HCG7 927 aaPredicted RBP10.02□□□□□ -0.8
GGA3-223ENST00000621870 LRRC4BQ9NT99 713 aa10.02□□□□□ -0.8
GGA3-223ENST00000621870 NKIRAS1Q9NYS0 192 aa10.02□□□□□ -0.8
GGA3-223ENST00000621870 ADAMTS1Q9UHI8 967 aa10.02□□□□□ -0.8
GGA3-223ENST00000621870 DDX41Q9UJV9 622 aaKnown RBP10.02□□□□□ -0.8
GGA3-223ENST00000621870 TRIM49BA6NDI0 452 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 DDTLA6NHG4 134 aaPredicted RBP10.02□□□□□ -0.81
GGA3-223ENST00000621870 H7C0C1 242 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 IKBKBO14920 756 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 LDHAP00338 332 aaKnown RBP10.02□□□□□ -0.81
GGA3-223ENST00000621870 CAP2P40123 477 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 ATP5OP48047 213 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 CYP27A1Q02318 531 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 ITIH3Q06033 890 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 SURF1Q15526 300 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 ARMCX2Q7L311 632 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 CPLX4Q7Z7G2 160 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 MAP7D3Q8IWC1 876 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 SCYL3Q8IZE3 742 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 SIX6OS1Q8N1H7 587 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 NEK9Q8TD19 979 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 ZDHHC15Q96MV8 337 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 HAUS2Q9NVX0 235 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 TSKSQ9UJT2 592 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 ANTXR2P58335 489 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 RPS6P62753 249 aaKnown RBP10.02□□□□□ -0.81
GGA3-223ENST00000621870 ZC3H13Q5T200 1668 aaKnown RBP10.02□□□□□ -0.81
GGA3-223ENST00000621870 PDZD4Q76G19 769 aaPredicted RBP10.02□□□□□ -0.81
GGA3-223ENST00000621870 ERO1BQ86YB8 467 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 IFT20Q8IY31 132 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 ZNF710Q8N1W2 664 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 MAIP1Q8WWC4 291 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 SEPT1Q8WYJ6 367 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 RWDD2AQ9UIY3 292 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 PPP2R2CQ9Y2T4 447 aa10.02□□□□□ -0.81
GGA3-223ENST00000621870 BZW2Q9Y6E2 419 aaKnown RBP10.02□□□□□ -0.81
GGA3-223ENST00000621870 PXDNQ92626 1479 aa10.01□□□□□ -0.81
GGA3-223ENST00000621870 TYW5A2RUC4 315 aaKnown RBP10.01□□□□□ -0.81
GGA3-223ENST00000621870 GIPC1O14908 333 aa10.01□□□□□ -0.81
GGA3-223ENST00000621870 BNIP3LO60238 219 aa10.01□□□□□ -0.81
GGA3-223ENST00000621870 RESP18Q5W5W9 173 aa10.01□□□□□ -0.81
GGA3-223ENST00000621870 FAM117BQ6P1L5 589 aa10.01□□□□□ -0.81
GGA3-223ENST00000621870 RNF139Q8WU17 664 aa10.01□□□□□ -0.81
GGA3-223ENST00000621870 SAAL1Q96ER3 474 aa10.01□□□□□ -0.81
GGA3-223ENST00000621870 ERO1AQ96HE7 468 aa10.01□□□□□ -0.81
GGA3-223ENST00000621870 NUDT12Q9BQG2 462 aa10.01□□□□□ -0.81
GGA3-223ENST00000621870 CALN1Q9BXU9 219 aa10.01□□□□□ -0.81
GGA3-223ENST00000621870 SLC38A10Q9HBR0 1119 aa10.01□□□□□ -0.81
GGA3-223ENST00000621870 NGRNQ9NPE2 291 aaKnown RBP10.01□□□□□ -0.81
GGA3-223ENST00000621870 ODF2LQ9ULJ1 636 aa10.01□□□□□ -0.81
GGA3-223ENST00000621870 KIF28PB7ZC32 967 aa10.01□□□□□ -0.81
GGA3-223ENST00000621870 TBC1D8O95759 1140 aa10.01□□□□□ -0.81
GGA3-223ENST00000621870 KRT15P19012 456 aa10.01□□□□□ -0.81
GGA3-223ENST00000621870 MAPK4P31152 587 aa10.01□□□□□ -0.81
GGA3-223ENST00000621870 ETF1P62495 437 aaKnown RBP10.01□□□□□ -0.81
GGA3-223ENST00000621870 EPHA7Q15375 998 aa10.01□□□□□ -0.81
GGA3-223ENST00000621870 CFAP157Q5JU67 520 aa10.01□□□□□ -0.81
GGA3-223ENST00000621870 DNAJC24Q6P3W2 148 aa10.01□□□□□ -0.81
GGA3-223ENST00000621870 INTS8Q75QN2 995 aaKnown RBP10.01□□□□□ -0.81
GGA3-223ENST00000621870 CCNYQ8ND76 341 aa10.01□□□□□ -0.81
GGA3-223ENST00000621870 GCOM2Q9BZD3 368 aaPredicted RBP10.01□□□□□ -0.81
GGA3-223ENST00000621870 TRIM7Q9C029 511 aa10.01□□□□□ -0.81
GGA3-223ENST00000621870 POLR3FQ9H1D9 316 aaPredicted RBP10.01□□□□□ -0.81
GGA3-223ENST00000621870 VPS37BQ9H9H4 285 aa10.01□□□□□ -0.81
GGA3-223ENST00000621870 MAP1BP46821 2468 aaKnown RBP10.01□□□□□ -0.81
GGA3-223ENST00000621870 RIOK3O14730 519 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms