RNA–Protein interactions for RNA: ENST00000621176.1

TRIM6-212, Transcript of tripartite motif containing 6, humanhuman

TSL 5 BASIC

Gene TRIM6, Length 3,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-212ENST00000621176 EXOC3L4Q17RC7 722 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 EDRF1Q3B7T1 1238 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 GJB7Q6PEY0 223 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 POTEGQ6S5H5 508 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 POTEEQ6S8J3 1075 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 CUL5Q93034 780 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 LRRC45Q96CN5 670 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 CALR3Q96L12 384 aaKnown RBP9.58□□□□□ -0.88
TRIM6-212ENST00000621176 ARMCX3Q9UH62 379 aaPredicted RBP9.58□□□□□ -0.88
TRIM6-212ENST00000621176 CNTNAP4Q9C0A0 1308 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 ATAD5Q96QE3 1844 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 LOC102724159A0A0B4J2E5 919 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 FAM170AA1A519 330 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 FRMD3A2A2Y4 597 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 USP17L10C9JJH3 530 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 GNPATO15228 680 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 AKAP3O75969 853 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 KRT18P05783 430 aaKnown RBP9.58□□□□□ -0.88
TRIM6-212ENST00000621176 RFC4P35249 363 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 USP8P40818 1118 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 SLC12A3P55017 1021 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 PICALMQ13492 652 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 GRAPQ13588 217 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 PWP2Q15269 919 aaKnown RBP9.58□□□□□ -0.88
TRIM6-212ENST00000621176 C10orf76Q5T2E6 689 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 DPP8Q6V1X1 898 aaPredicted RBP9.58□□□□□ -0.88
TRIM6-212ENST00000621176 PEX26Q7Z412 305 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 GRAPLQ8TC17 118 aaPredicted RBP9.58□□□□□ -0.88
TRIM6-212ENST00000621176 OSBPL7Q9BZF2 842 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 PSTPIP2Q9H939 334 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 CD248Q9HCU0 757 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 GGA2Q9UJY4 613 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 NOVA2Q9UNW9 492 aaKnown RBP9.58□□□□□ -0.88
TRIM6-212ENST00000621176 NR2E1Q9Y466 385 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 KDM3AQ9Y4C1 1321 aa9.58□□□□□ -0.88
TRIM6-212ENST00000621176 STRCQ7RTU9 1775 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 SRRM3A6NNA2 597 aaPredicted RBP9.57□□□□□ -0.88
TRIM6-212ENST00000621176 MEIS1O00470 390 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 RPS6KA4O75676 772 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 AFPP02771 609 aaKnown RBP9.57□□□□□ -0.88
TRIM6-212ENST00000621176 CASP4P49662 377 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 GSCP56915 257 aaPredicted RBP9.57□□□□□ -0.88
TRIM6-212ENST00000621176 GPSM2P81274 684 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 ODF2Q5BJF6 829 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 DCAF17Q5H9S7 520 aaPredicted RBP9.57□□□□□ -0.88
TRIM6-212ENST00000621176 MFSD14BQ5SR56 506 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 CHADLQ6NUI6 762 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 KCTD1Q719H9 257 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 TMC3Q7Z5M5 1100 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 SLFN11Q7Z7L1 901 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 ARFGAP2Q8N6H7 521 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 GPATCH11Q8N954 259 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 JPH2Q9BR39 696 aaPredicted RBP9.57□□□□□ -0.88
TRIM6-212ENST00000621176 DHX36Q9H2U1 1008 aaKnown RBP9.57□□□□□ -0.88
TRIM6-212ENST00000621176 SIX2Q9NPC8 291 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 NENFQ9UMX5 172 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 STXBP5LQ9Y2K9 1186 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 DNM1LO00429 736 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 DDX3XO00571 662 aaKnown RBP eCLIP9.57□□□□□ -0.88
TRIM6-212ENST00000621176 RASSF9O75901 435 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 SLURP2P0DP57 97 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 PRKCIP41743 596 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 MRPL12P52815 198 aaKnown RBP9.57□□□□□ -0.88
TRIM6-212ENST00000621176 GABPAQ06546 454 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 DDR1Q08345 913 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 GIT2Q14161 759 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 PPP4R3CPQ6ZMV5 832 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 CCDC91Q7Z6B0 441 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 DAAM2Q86T65 1068 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 NT5DC3Q86UY8 548 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 RASGEF1CQ8N431 466 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 DPH5Q9H2P9 285 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 KCNMB3Q9NPA1 279 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 TRAF3IP3Q9Y228 551 aa9.57□□□□□ -0.88
TRIM6-212ENST00000621176 ATF5Q9Y2D1 282 aaPredicted RBP9.57□□□□□ -0.88
TRIM6-212ENST00000621176 RTCBQ9Y3I0 505 aaKnown RBP9.57□□□□□ -0.88
TRIM6-212ENST00000621176 BZW2Q9Y6E2 419 aaKnown RBP9.57□□□□□ -0.88
TRIM6-212ENST00000621176 TNRC6CQ9HCJ0 1690 aaKnown RBP9.57□□□□□ -0.88
TRIM6-212ENST00000621176 IGKV6D-41A0A0C4DH26 115 aa9.56□□□□□ -0.88
TRIM6-212ENST00000621176 RGL2O15211 777 aa9.56□□□□□ -0.88
TRIM6-212ENST00000621176 FLOT1O75955 427 aa9.56□□□□□ -0.88
TRIM6-212ENST00000621176 XRCC5P13010 732 aaKnown RBP9.56□□□□□ -0.88
TRIM6-212ENST00000621176 GCFC2P16383 781 aaKnown RBP9.56□□□□□ -0.88
TRIM6-212ENST00000621176 PLCG2P16885 1265 aa9.56□□□□□ -0.88
TRIM6-212ENST00000621176 SMTNP53814 917 aa9.56□□□□□ -0.88
TRIM6-212ENST00000621176 MAGOHP61326 146 aaKnown RBP9.56□□□□□ -0.88
TRIM6-212ENST00000621176 PPP2R2AP63151 447 aa9.56□□□□□ -0.88
TRIM6-212ENST00000621176 KCNA1Q09470 495 aa9.56□□□□□ -0.88
TRIM6-212ENST00000621176 PABPC4Q13310 644 aaKnown RBP eCLIP9.56□□□□□ -0.88
TRIM6-212ENST00000621176 BIRC3Q13489 604 aa9.56□□□□□ -0.88
TRIM6-212ENST00000621176 BYSLQ13895 437 aaKnown RBP9.56□□□□□ -0.88
TRIM6-212ENST00000621176 EPHA7Q15375 998 aa9.56□□□□□ -0.88
TRIM6-212ENST00000621176 IFI16Q16666 785 aaKnown RBP9.56□□□□□ -0.88
TRIM6-212ENST00000621176 KNOP1Q1ED39 458 aaKnown RBP9.56□□□□□ -0.88
TRIM6-212ENST00000621176 TCERG1LQ5VWI1 586 aa9.56□□□□□ -0.88
TRIM6-212ENST00000621176 PPP1R18Q6NYC8 613 aa9.56□□□□□ -0.88
TRIM6-212ENST00000621176 RUFY4Q6ZNE9 571 aa9.56□□□□□ -0.88
TRIM6-212ENST00000621176 FRMD5Q7Z6J6 570 aa9.56□□□□□ -0.88
TRIM6-212ENST00000621176 SFR1Q86XK3 245 aa9.56□□□□□ -0.88
TRIM6-212ENST00000621176 CATSPER3Q86XQ3 398 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms