RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 KIFAP3Q92845 792 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 NOX5Q96PH1 765 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 NUP58Q9BVL2 599 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 TRIM9Q9C026 710 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 SLITRK6Q9H5Y7 841 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 SH3GLB2Q9NR46 395 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 RSPH14Q9UHP6 348 aa9.02□□□□□ -0.97
PTPDC1-204ENST00000620992 USP17L5A8MUK1 530 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 KLRC4O43908 158 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 TUBBP07437 444 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 CD58P19256 250 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 SAT1P21673 171 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 CXCR5P32302 372 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 POLR2FP61218 127 aaKnown RBP9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 ZBED6P86452 979 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 AMPD2Q01433 879 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 GOLGA5Q8TBA6 731 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 LMBR1Q8WVP7 490 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 DNAJC7Q99615 494 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 LSM14BQ9BX40 385 aaKnown RBP9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 TEKT3Q9BXF9 490 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 IFIH1Q9BYX4 1025 aaKnown RBP9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 CCSER1Q9C0I3 900 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 KBTBD4Q9NVX7 518 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 RABGAP1Q9Y3P9 1069 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 DISP2A7MBM2 1401 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 DOCK2Q92608 1830 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 RCCD1A6NED2 376 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 SH3BP5O60239 455 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 RNF40O75150 1001 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 SRGNP10124 158 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 ATF7P17544 494 aaPredicted RBP9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 USP14P54578 494 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 CCNA1P78396 465 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 EZH2Q15910 746 aaKnown RBP9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 KAZNQ674X7 775 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 FAM117BQ6P1L5 589 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 SAMD7Q7Z3H4 446 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 DCLK2Q8N568 766 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 FAM71BQ8TC56 605 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 DUSP9Q99956 384 aaKnown RBP9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 GOLGA8SH3BPF8 625 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 PSMD14O00487 310 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 LPXNO60711 386 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 FECHP22830 423 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 MCM3P25205 808 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 IREB2P48200 963 aaKnown RBP9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 HMGCS2P54868 508 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 GRIK5Q16478 980 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 SLC27A3Q5K4L6 730 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 POTEDQ86YR6 584 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 ZNF507Q8TCN5 953 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 RPS6KC1Q96S38 1066 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 TMEM260Q9NX78 707 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 SPATA31A5Q5VU36 1347 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 SPATA31A7Q8IWB4 1347 aa9.01□□□□□ -0.97
PTPDC1-204ENST00000620992 LRP5O75197 1615 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 ANKRD65E5RJM6 399 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 CDC37Q16543 378 aaPredicted RBP9□□□□□ -0.97
PTPDC1-204ENST00000620992 SCARA5Q6ZMJ2 495 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 BARGINQ6ZT62 677 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 RTKN2Q8IZC4 609 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 LRRC15Q8TF66 581 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 NLRP7Q8WX94 980 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 TNKS1BP1Q9C0C2 1729 aaKnown RBP9□□□□□ -0.97
PTPDC1-204ENST00000620992 STK25O00506 426 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 ITKQ08881 620 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 GPATCH4Q5T3I0 446 aaKnown RBP9□□□□□ -0.97
PTPDC1-204ENST00000620992 C2orf69Q8N8R5 385 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 NAP1L4Q99733 375 aaKnown RBP9□□□□□ -0.97
PTPDC1-204ENST00000620992 COA1Q9GZY4 146 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 BHMT2Q9H2M3 363 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 MTUS1Q9ULD2 1270 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 COL4A1P02462 1669 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 BRWD1Q9NSI6 2320 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 NKRFO15226 690 aaKnown RBP eCLIP9□□□□□ -0.97
PTPDC1-204ENST00000620992 MOCS3O95396 460 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 FERP16591 822 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 CCDC6Q16204 474 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 SLC35G1Q2M3R5 365 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 IPO4Q8TEX9 1081 aaKnown RBP9□□□□□ -0.97
PTPDC1-204ENST00000620992 CEP95Q96GE4 821 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 CCDC77Q9BR77 488 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 ZBED2Q9BTP6 218 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 LAD1O00515 517 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 TRIM66O15016 1216 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 MYL1P05976 194 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 ASNSP08243 561 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 VAV2P52735 878 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 SEL1L2Q5TEA6 688 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 GALNT17Q6IS24 598 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 CDAN1Q8IWY9 1227 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 CTAGE3PQ8IX95 158 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 AFAP1L1Q8TED9 768 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 RMDN3Q96TC7 470 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 NT5C3AQ9H0P0 336 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 PRKAG2Q9UGJ0 569 aa9□□□□□ -0.97
PTPDC1-204ENST00000620992 BCORQ6W2J9 1755 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 POTEMA6NI47 508 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 ZBBXA8MT70 800 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms