RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 CTAGE1Q96RT6 745 aa18.66■□□□□ 0.58
TRAPPC3-210ENST00000617904 ZSWIM4Q9H7M6 989 aa18.66■□□□□ 0.58
TRAPPC3-210ENST00000617904 IVNS1ABPQ9Y6Y0 642 aa18.66■□□□□ 0.58
TRAPPC3-210ENST00000617904 MED24O75448 989 aa18.65■□□□□ 0.58
TRAPPC3-210ENST00000617904 NFASCO94856 1347 aa18.65■□□□□ 0.58
TRAPPC3-210ENST00000617904 CDC25BP30305 580 aa18.65■□□□□ 0.58
TRAPPC3-210ENST00000617904 FILIP1LQ4L180 1135 aa18.65■□□□□ 0.58
TRAPPC3-210ENST00000617904 COBLL1Q53SF7 1204 aa18.65■□□□□ 0.58
TRAPPC3-210ENST00000617904 KLHL10Q6JEL2 608 aa18.65■□□□□ 0.58
TRAPPC3-210ENST00000617904 ZNF746Q6NUN9 644 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC3-210ENST00000617904 PLEKHH3Q7Z736 793 aa18.65■□□□□ 0.58
TRAPPC3-210ENST00000617904 TRMT44Q8IYL2 757 aaKnown RBP18.65■□□□□ 0.58
TRAPPC3-210ENST00000617904 SYT2Q8N9I0 419 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC3-210ENST00000617904 DDX12PQ92771 950 aa18.65■□□□□ 0.58
TRAPPC3-210ENST00000617904 MRFAP1L1Q96HT8 127 aa18.65■□□□□ 0.58
TRAPPC3-210ENST00000617904 INPP4AQ96PE3 977 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC3-210ENST00000617904 UNC45AQ9H3U1 944 aa18.65■□□□□ 0.58
TRAPPC3-210ENST00000617904 STRNO43815 780 aa18.64■□□□□ 0.57
TRAPPC3-210ENST00000617904 TBCAO75347 108 aaKnown RBP18.64■□□□□ 0.57
TRAPPC3-210ENST00000617904 ALDH5A1P51649 535 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC3-210ENST00000617904 CACNB2Q08289 660 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC3-210ENST00000617904 CCL14Q16627 93 aa18.64■□□□□ 0.57
TRAPPC3-210ENST00000617904 STXBP4Q6ZWJ1 553 aa18.64■□□□□ 0.57
TRAPPC3-210ENST00000617904 FAM114A1Q8IWE2 563 aa18.64■□□□□ 0.57
TRAPPC3-210ENST00000617904 IL31RAQ8NI17 732 aa18.64■□□□□ 0.57
TRAPPC3-210ENST00000617904 GJA10Q969M2 543 aa18.64■□□□□ 0.57
TRAPPC3-210ENST00000617904 DYDC2Q96IM9 177 aa18.64■□□□□ 0.57
TRAPPC3-210ENST00000617904 MTRQ99707 1265 aa18.64■□□□□ 0.57
TRAPPC3-210ENST00000617904 TSG101Q99816 390 aa18.64■□□□□ 0.57
TRAPPC3-210ENST00000617904 HSD17B14Q9BPX1 270 aa18.64■□□□□ 0.57
TRAPPC3-210ENST00000617904 PANK4Q9NVE7 773 aa18.64■□□□□ 0.57
TRAPPC3-210ENST00000617904 SLC5A4Q9NY91 659 aa18.64■□□□□ 0.57
TRAPPC3-210ENST00000617904 MAGEC2Q9UBF1 373 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC3-210ENST00000617904 RANBP2P49792 3224 aaKnown RBP18.63■□□□□ 0.57
TRAPPC3-210ENST00000617904 A0A1W2PPC1 479 aa18.63■□□□□ 0.57
TRAPPC3-210ENST00000617904 ARHGEF35A5YM69 484 aa18.63■□□□□ 0.57
TRAPPC3-210ENST00000617904 ASB14A6NK59 587 aa18.63■□□□□ 0.57
TRAPPC3-210ENST00000617904 E9PMD0 336 aa18.63■□□□□ 0.57
TRAPPC3-210ENST00000617904 DDX39AO00148 427 aaKnown RBP18.63■□□□□ 0.57
TRAPPC3-210ENST00000617904 NRDCO43847 1150 aa18.63■□□□□ 0.57
TRAPPC3-210ENST00000617904 TGFB3P10600 412 aa18.63■□□□□ 0.57
TRAPPC3-210ENST00000617904 GAP43P17677 238 aa18.63■□□□□ 0.57
TRAPPC3-210ENST00000617904 CASP1P29466 404 aa18.63■□□□□ 0.57
TRAPPC3-210ENST00000617904 RGS2P41220 211 aa18.63■□□□□ 0.57
TRAPPC3-210ENST00000617904 QARSP47897 775 aaKnown RBP18.63■□□□□ 0.57
TRAPPC3-210ENST00000617904 ZNF75DP51815 510 aa18.63■□□□□ 0.57
TRAPPC3-210ENST00000617904 CYP4A11Q02928 519 aa18.63■□□□□ 0.57
TRAPPC3-210ENST00000617904 POTEGQ6S5H5 508 aa18.63■□□□□ 0.57
TRAPPC3-210ENST00000617904 DYMQ7RTS9 669 aa18.63■□□□□ 0.57
TRAPPC3-210ENST00000617904 ATP6V0A1Q93050 837 aa18.63■□□□□ 0.57
TRAPPC3-210ENST00000617904 UIMC1Q96RL1 719 aa18.63■□□□□ 0.57
TRAPPC3-210ENST00000617904 SENP7Q9BQF6 1050 aa18.63■□□□□ 0.57
TRAPPC3-210ENST00000617904 C11orf49Q9H6J7 331 aa18.63■□□□□ 0.57
TRAPPC3-210ENST00000617904 NFE2L3Q9Y4A8 694 aa18.63■□□□□ 0.57
TRAPPC3-210ENST00000617904 A0A087WWV3 80 aa18.62■□□□□ 0.57
TRAPPC3-210ENST00000617904 MYMKA6NI61 221 aa18.62■□□□□ 0.57
TRAPPC3-210ENST00000617904 PSAPP07602 524 aa18.62■□□□□ 0.57
TRAPPC3-210ENST00000617904 SPATA31C1P0DKV0 1188 aa18.62■□□□□ 0.57
TRAPPC3-210ENST00000617904 CCND3P30281 292 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC3-210ENST00000617904 ICAM3P32942 547 aa18.62■□□□□ 0.57
TRAPPC3-210ENST00000617904 OTUD6AQ7L8S5 288 aa18.62■□□□□ 0.57
TRAPPC3-210ENST00000617904 C7orf61Q8IZ16 206 aa18.62■□□□□ 0.57
TRAPPC3-210ENST00000617904 ABRAQ8N0Z2 381 aa18.62■□□□□ 0.57
TRAPPC3-210ENST00000617904 ADSSL1Q8N142 457 aa18.62■□□□□ 0.57
TRAPPC3-210ENST00000617904 NELFBQ8WX92 580 aa18.62■□□□□ 0.57
TRAPPC3-210ENST00000617904 APBA2Q99767 749 aa18.62■□□□□ 0.57
TRAPPC3-210ENST00000617904 TIPINQ9BVW5 301 aa18.62■□□□□ 0.57
TRAPPC3-210ENST00000617904 PKD2L1Q9P0L9 805 aa18.62■□□□□ 0.57
TRAPPC3-210ENST00000617904 CTNND2Q9UQB3 1225 aa18.62■□□□□ 0.57
TRAPPC3-210ENST00000617904 COL4A3BPQ9Y5P4 624 aa18.62■□□□□ 0.57
TRAPPC3-210ENST00000617904 SZT2Q5T011 3432 aa18.62■□□□□ 0.57
TRAPPC3-210ENST00000617904 SPATA31C2B4DYI2 1134 aa18.61■□□□□ 0.57
TRAPPC3-210ENST00000617904 PPP1R3GB7ZBB8 358 aa18.61■□□□□ 0.57
TRAPPC3-210ENST00000617904 KLRC4O43908 158 aa18.61■□□□□ 0.57
TRAPPC3-210ENST00000617904 SLITRK3O94933 977 aa18.61■□□□□ 0.57
TRAPPC3-210ENST00000617904 BMP6P22004 513 aa18.61■□□□□ 0.57
TRAPPC3-210ENST00000617904 PSMC5P62195 406 aa18.61■□□□□ 0.57
TRAPPC3-210ENST00000617904 MAP2K5Q13163 448 aa18.61■□□□□ 0.57
TRAPPC3-210ENST00000617904 NEDD9Q14511 834 aa18.61■□□□□ 0.57
TRAPPC3-210ENST00000617904 LHX8Q68G74 356 aa18.61■□□□□ 0.57
TRAPPC3-210ENST00000617904 MIS18BP1Q6P0N0 1132 aa18.61■□□□□ 0.57
TRAPPC3-210ENST00000617904 GDF15Q99988 308 aa18.61■□□□□ 0.57
TRAPPC3-210ENST00000617904 LXNQ9BS40 222 aa18.61■□□□□ 0.57
TRAPPC3-210ENST00000617904 JPH1Q9HDC5 661 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC3-210ENST00000617904 PCDHA10Q9Y5I2 948 aa18.61■□□□□ 0.57
TRAPPC3-210ENST00000617904 EML1O00423 815 aa18.6■□□□□ 0.57
TRAPPC3-210ENST00000617904 SOX1O00570 391 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC3-210ENST00000617904 LYPLA2O95372 231 aa18.6■□□□□ 0.57
TRAPPC3-210ENST00000617904 SLC12A3P55017 1021 aa18.6■□□□□ 0.57
TRAPPC3-210ENST00000617904 FANCCQ00597 558 aa18.6■□□□□ 0.57
TRAPPC3-210ENST00000617904 CTTNQ14247 550 aaKnown RBP18.6■□□□□ 0.57
TRAPPC3-210ENST00000617904 NCAPHQ15003 741 aa18.6■□□□□ 0.57
TRAPPC3-210ENST00000617904 HERC4Q5GLZ8 1057 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC3-210ENST00000617904 FAM26FQ5R3K3 315 aa18.6■□□□□ 0.57
TRAPPC3-210ENST00000617904 B3GNT9Q6UX72 402 aa18.6■□□□□ 0.57
TRAPPC3-210ENST00000617904 GUF1Q8N442 669 aaKnown RBP18.6■□□□□ 0.57
TRAPPC3-210ENST00000617904 FAM133AQ8N9E0 248 aa18.6■□□□□ 0.57
TRAPPC3-210ENST00000617904 BHMT2Q9H2M3 363 aa18.6■□□□□ 0.57
TRAPPC3-210ENST00000617904 FANCLQ9NW38 375 aa18.6■□□□□ 0.57
TRAPPC3-210ENST00000617904 SEL1LQ9UBV2 794 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms