RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-222ENST00000617185 ISCUQ9H1K1 167 aa12.58□□□□□ -0.4
TP53-222ENST00000617185 RNPEPL1Q9HAU8 725 aa12.58□□□□□ -0.4
TP53-222ENST00000617185 USP17L12C9JPN9 530 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 USP17L21D6R901 530 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 HSPA1LP34931 641 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 CUL1Q13616 776 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 UBE4AQ14139 1066 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 NTRK3Q16288 839 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 LONP2Q86WA8 852 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 SEPT12Q8IYM1 358 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 LRRC34Q8IZ02 419 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 KIF2BQ8N4N8 673 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 RNF10Q8N5U6 811 aaKnown RBP12.57□□□□□ -0.4
TP53-222ENST00000617185 MDM1Q8TC05 714 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 GJD4Q96KN9 370 aaPredicted RBP12.57□□□□□ -0.4
TP53-222ENST00000617185 KRT12Q99456 494 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 MLXIPQ9HAP2 919 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 CNTNAP4Q9C0A0 1308 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 LGALS16A8MUM7 142 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 DCDC2CA8MYV0 355 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 FAM200BP0CF97 657 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 GSTT1P30711 240 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 TMEM62Q0P6H9 643 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 TRAPPC3LQ5T215 181 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 ARHGAP18Q8N392 663 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 IQCDQ96DY2 449 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 MS4A14Q96JA4 679 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 CCDC42Q96M95 316 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 RAB3IPQ96QF0 476 aaPredicted RBP12.57□□□□□ -0.4
TP53-222ENST00000617185 RIOK1Q9BRS2 568 aaKnown RBP12.57□□□□□ -0.4
TP53-222ENST00000617185 IFIH1Q9BYX4 1025 aaKnown RBP12.57□□□□□ -0.4
TP53-222ENST00000617185 THAP9Q9H5L6 903 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 CTTNBP2NLQ9P2B4 639 aa12.57□□□□□ -0.4
TP53-222ENST00000617185 BAZ2AQ9UIF9 1905 aaKnown RBP12.57□□□□□ -0.4
TP53-222ENST00000617185 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.56□□□□□ -0.4
TP53-222ENST00000617185 BTBD18B2RXH4 712 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 TPD52L2O43399 206 aaKnown RBP12.56□□□□□ -0.4
TP53-222ENST00000617185 TMCC1O94876 653 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 HIBADHP31937 336 aaKnown RBP12.56□□□□□ -0.4
TP53-222ENST00000617185 CDK17Q00537 523 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 DPYDQ12882 1025 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 PAK1Q13153 545 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 NR5A1Q13285 461 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 DIXDC1Q155Q3 683 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 KRT71Q3SY84 523 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 ASRGL1Q7L266 308 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 SH3RF1Q7Z6J0 888 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 UBLCP1Q8WVY7 318 aaPredicted RBP12.56□□□□□ -0.4
TP53-222ENST00000617185 C17orf50Q8WW18 174 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 DNAJC9Q8WXX5 260 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 UBAC1Q9BSL1 405 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 TLR10Q9BXR5 811 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 SRPRBQ9Y5M8 271 aaKnown RBP12.56□□□□□ -0.4
TP53-222ENST00000617185 BZW2Q9Y6E2 419 aaKnown RBP12.56□□□□□ -0.4
TP53-222ENST00000617185 SLC4A7Q9Y6M7 1214 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 ZNF804BA4D1E1 1349 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 TNKSO95271 1327 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 CICQ96RK0 1608 aaPredicted RBP12.56□□□□□ -0.4
TP53-222ENST00000617185 GRID2IPA4D2P6 1211 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 SART1O43290 800 aaKnown RBP12.56□□□□□ -0.4
TP53-222ENST00000617185 ZNF189O75820 626 aaPredicted RBP12.56□□□□□ -0.4
TP53-222ENST00000617185 EIF4BP23588 611 aaKnown RBP12.56□□□□□ -0.4
TP53-222ENST00000617185 SF3A3Q12874 501 aaKnown RBP eCLIP12.56□□□□□ -0.42e-8■■■□□ 17.3
TP53-222ENST00000617185 TRADDQ15628 312 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 SFMBT2Q5VUG0 894 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 FOXB2Q5VYV0 432 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 RETREG2Q8NC44 543 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 TLCD1Q96CP7 247 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 PAGE5Q96GU1 130 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 TMEM87BQ96K49 555 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 NKX1-2Q9UD57 310 aaPredicted RBP12.56□□□□□ -0.4
TP53-222ENST00000617185 ZMYND8Q9ULU4 1186 aaPredicted RBP12.56□□□□□ -0.4
TP53-222ENST00000617185 MAPK8IP1Q9UQF2 711 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 WDR37Q9Y2I8 494 aa12.56□□□□□ -0.4
TP53-222ENST00000617185 COL5A3P25940 1745 aaPredicted RBP12.55□□□□□ -0.4
TP53-222ENST00000617185 PALM3A6NDB9 673 aaPredicted RBP12.55□□□□□ -0.4
TP53-222ENST00000617185 NCK2O43639 380 aa12.55□□□□□ -0.4
TP53-222ENST00000617185 COBLO75128 1261 aa12.55□□□□□ -0.4
TP53-222ENST00000617185 CCDC166P0CW27 439 aa12.55□□□□□ -0.4
TP53-222ENST00000617185 CHN1P15882 459 aa12.55□□□□□ -0.4
TP53-222ENST00000617185 ZNF24P17028 368 aa12.55□□□□□ -0.4
TP53-222ENST00000617185 TM4SF1P30408 202 aa12.55□□□□□ -0.4
TP53-222ENST00000617185 TNNC1P63316 161 aa12.55□□□□□ -0.4
TP53-222ENST00000617185 PLS1Q14651 629 aa12.55□□□□□ -0.4
TP53-222ENST00000617185 SAFBQ15424 915 aaKnown RBP eCLIP12.55□□□□□ -0.4
TP53-222ENST00000617185 NOSTRINQ8IVI9 506 aa12.55□□□□□ -0.4
TP53-222ENST00000617185 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.55□□□□□ -0.4
TP53-222ENST00000617185 STK32AQ8WU08 396 aa12.55□□□□□ -0.4
TP53-222ENST00000617185 PTPRN2Q92932 1015 aa12.55□□□□□ -0.4
TP53-222ENST00000617185 SUN2Q9UH99 717 aa12.55□□□□□ -0.4
TP53-222ENST00000617185 PCDHA13Q9Y5I0 950 aa12.55□□□□□ -0.4
TP53-222ENST00000617185 ZNF263O14978 683 aa12.55□□□□□ -0.4
TP53-222ENST00000617185 PFDN1O60925 122 aa12.55□□□□□ -0.4
TP53-222ENST00000617185 TRIM21P19474 475 aaKnown RBP12.55□□□□□ -0.4
TP53-222ENST00000617185 SH3BGRP55822 239 aaPredicted RBP12.55□□□□□ -0.4
TP53-222ENST00000617185 SSRP1Q08945 709 aaKnown RBP12.55□□□□□ -0.4
TP53-222ENST00000617185 RTN1Q16799 776 aa12.55□□□□□ -0.4
TP53-222ENST00000617185 SH2D4BQ5SQS7 431 aa12.55□□□□□ -0.4
TP53-222ENST00000617185 RRAGBQ5VZM2 374 aa12.55□□□□□ -0.4
TP53-222ENST00000617185 ZNF507Q8TCN5 953 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms