RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 SDF4Q9BRK5 362 aa9.01□□□□□ -0.97
PCDH9-205ENST00000614931 JPH1Q9HDC5 661 aaPredicted RBP9.01□□□□□ -0.97
PCDH9-205ENST00000614931 DDX19AQ9NUU7 478 aaKnown RBP9.01□□□□□ -0.97
PCDH9-205ENST00000614931 GNEQ9Y223 722 aaKnown RBP9.01□□□□□ -0.97
PCDH9-205ENST00000614931 TRIM43BA6NCK2 446 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 E9PMD0 336 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 SLITRK3O94933 977 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 ATG7O95352 703 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 ASGR1P07306 291 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 C6orf222P0C671 652 aaPredicted RBP9□□□□□ -0.97
PCDH9-205ENST00000614931 SUPT20HL2P0C7V6 817 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 TXNP10599 105 aaKnown RBP9□□□□□ -0.97
PCDH9-205ENST00000614931 RPA1P27694 616 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 CASP1P29466 404 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 ACTR2P61160 394 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 PSMC6P62333 389 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 MCM6Q14566 821 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 TTLL4Q14679 1199 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 CAMK4Q16566 473 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 LRIT3Q3SXY7 679 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 GNASQ5JWF2 1037 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 CCDC183Q5T5S1 534 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 KRT79Q5XKE5 535 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 IQSEC1Q6DN90 963 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 ZNF746Q6NUN9 644 aaPredicted RBP9□□□□□ -0.97
PCDH9-205ENST00000614931 ABHD15Q6UXT9 468 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 ANKRD33Q7Z3H0 272 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 SH3RF1Q7Z6J0 888 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 CCDC60Q8IWA6 550 aaPredicted RBP9□□□□□ -0.97
PCDH9-205ENST00000614931 RAD54LQ92698 747 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 TRIM43Q96BQ3 446 aaPredicted RBP9□□□□□ -0.97
PCDH9-205ENST00000614931 TOX2Q96NM4 488 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 HSD17B14Q9BPX1 270 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 LBHD1Q9BQE6 289 aaPredicted RBP9□□□□□ -0.97
PCDH9-205ENST00000614931 POLR3CQ9BUI4 534 aaPredicted RBP9□□□□□ -0.97
PCDH9-205ENST00000614931 RAB34Q9BZG1 259 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 NUP62CLQ9H1M0 184 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 SPC25Q9HBM1 224 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 STARD7Q9NQZ5 370 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 PDLIM7Q9NR12 457 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 PRKAG2Q9UGJ0 569 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 Q9Y3F1 56 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 IGSF9BQ9UPX0 1349 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 KDM3AQ9Y4C1 1321 aa9□□□□□ -0.97
PCDH9-205ENST00000614931 SCN10AQ9Y5Y9 1956 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 TRIOBPQ9H2D6 2365 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 IGKV6D-21A0A0A0MT36 114 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 TMEM150BA6NC51 233 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 WDR64B1ANS9 1081 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 SLC26A4O43511 780 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 ZNF862O60290 1169 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 KINO60870 393 aaKnown RBP8.99□□□□□ -0.97
PCDH9-205ENST00000614931 STBD1O95210 358 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 GH1P01241 217 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 SLFN14P0C7P3 912 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 TGFB3P10600 412 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 TXLNAP40222 546 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 STAT6P42226 847 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 CDK7P50613 346 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 JAK3P52333 1124 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 PNOCQ13519 176 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 NEDD9Q14511 834 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 HSDL1Q3SXM5 330 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 DUSP28Q4G0W2 176 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 RRAGBQ5VZM2 374 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 HAUS3Q68CZ6 603 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 GPR153Q6NV75 609 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 KCNV1Q6PIU1 500 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 METTL7BQ6UX53 244 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 RBM43Q6ZSC3 357 aaKnown RBP8.99□□□□□ -0.97
PCDH9-205ENST00000614931 TLK2Q86UE8 772 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 DHX37Q8IY37 1157 aaKnown RBP8.99□□□□□ -0.97
PCDH9-205ENST00000614931 CALML4Q96GE6 196 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 PAGE5Q96GU1 130 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 LRCH3Q96II8 777 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 GLT1D1Q96MS3 346 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 TIGD1Q96MW7 591 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 GPR20Q99678 358 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 LXNQ9BS40 222 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 GZF1Q9H116 711 aaPredicted RBP8.99□□□□□ -0.97
PCDH9-205ENST00000614931 TUFT1Q9NNX1 390 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 KIAA1024Q9UPX6 916 aa8.99□□□□□ -0.97
PCDH9-205ENST00000614931 RANBP2P49792 3224 aaKnown RBP8.98□□□□□ -0.97
PCDH9-205ENST00000614931 KIAA0355O15063 1070 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 PQBP1O60828 265 aaKnown RBP8.98□□□□□ -0.97
PCDH9-205ENST00000614931 P4HBP07237 508 aaKnown RBP8.98□□□□□ -0.97
PCDH9-205ENST00000614931 CLTBP09497 229 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 ATP4AP20648 1035 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 SFNP31947 248 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 AFMP43652 599 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 SLC12A3P55017 1021 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 BEX3Q00994 111 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 FAAP100Q0VG06 881 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 ZSCAN23Q3MJ62 389 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 SWSAP1Q6NVH7 229 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 TRIM50Q86XT4 487 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 TPH2Q8IWU9 490 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 CKAP2LQ8IYA6 745 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 SMAP1Q8IYB5 467 aaPredicted RBP8.98□□□□□ -0.97
PCDH9-205ENST00000614931 IQUBQ8NA54 791 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms