RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 SAMD3Q8N6K7 520 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 CCDC148Q8NFR7 591 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 SDF4Q9BRK5 362 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 PCDHB6Q9Y5E3 794 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 CCDC194A0A1B0GVG4 234 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 hCG_1984214I3L0E3 225 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 KLRC1P26715 233 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 GRIN1Q05586 938 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 BRDTQ58F21 947 aaPredicted RBP6.45□□□□□ -1.38
CPNE3-208ENST00000614678 B3GNT9Q6UX72 402 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 ZNF713Q8N859 430 aaPredicted RBP6.45□□□□□ -1.38
CPNE3-208ENST00000614678 DAGLBQ8NCG7 672 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 SLC5A5Q92911 643 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 C8orf76Q96K31 380 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 PRDM6Q9NQX0 595 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 DISC1Q9NRI5 854 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 RNF19AQ9NV58 838 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 TUBE1Q9UJT0 475 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 POTEB3A0JP26 581 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 STAM2O75886 525 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 UPP2O95045 317 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 KRT2P35908 639 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 TXKP42681 527 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 GATMP50440 423 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 KIZQ2M2Z5 673 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 POTEBQ6S5H4 581 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 NEK8Q86SG6 692 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 RTN4RL1Q86UN2 441 aaPredicted RBP6.45□□□□□ -1.38
CPNE3-208ENST00000614678 IL23AQ9NPF7 189 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 ZNF302Q9NR11 478 aa6.45□□□□□ -1.38
CPNE3-208ENST00000614678 MROH7Q68CQ1 1323 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 TLR3O15455 904 aaKnown RBP6.44□□□□□ -1.38
CPNE3-208ENST00000614678 GAS7O60861 476 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 DNAJB2P25686 324 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 TRAF1Q13077 416 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 RABEP1Q15276 862 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 KCNV1Q6PIU1 500 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 ANO5Q75V66 913 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 CKAP2LQ8IYA6 745 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 FBXO18Q8NFZ0 1043 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 LINC01599Q8WXQ3 324 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 KCNMB3Q9NPA1 279 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 ERAP1Q9NZ08 941 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 VPS13AQ96RL7 3174 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.44□□□□□ -1.38
CPNE3-208ENST00000614678 MGEA5O60502 916 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 FGBP02675 491 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 LRIT3Q3SXY7 679 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 RASIP1Q5U651 963 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 NCAPH2Q6IBW4 605 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 CPLX2Q6PUV4 134 aaKnown RBP6.44□□□□□ -1.38
CPNE3-208ENST00000614678 SESTD1Q86VW0 696 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 TMEM199Q8N511 208 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 CCDC12Q8WUD4 166 aaPredicted RBP6.44□□□□□ -1.38
CPNE3-208ENST00000614678 MYLIPQ8WY64 445 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 MBOAT7Q96N66 472 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 NKX2-4Q9H2Z4 354 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 SUGCTQ9HAC7 445 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 MAFBQ9Y5Q3 323 aaPredicted RBP6.44□□□□□ -1.38
CPNE3-208ENST00000614678 CA3P07451 260 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 CD52P31358 61 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 PRKCEQ02156 737 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 ADGRE1Q14246 886 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 Q4G0T1 1027 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 MCTP1Q6DN14 999 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 XRRA1Q6P2D8 792 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 MAEAQ7L5Y9 396 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 KIAA0319LQ8IZA0 1049 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 METTL13Q8N6R0 699 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 PIGOQ8TEQ8 1089 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 LRRC15Q8TF66 581 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 CEP89Q96ST8 783 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 CDY2AQ9Y6F7 541 aa6.44□□□□□ -1.38
CPNE3-208ENST00000614678 NFASCO94856 1347 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 EMSYQ7Z589 1322 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 CYP3A7-CYP3A51PA0A087WV96 503 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 RSPH10B2B2RC85 870 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 CDKL5O76039 1030 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 RSPH10BP0C881 870 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 SELPP16109 830 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 CYP3A7P24462 503 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 USP11P51784 963 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 LPIN1Q14693 890 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 MTERF2Q49AM1 385 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 MTHFD1LQ6UB35 978 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 USP38Q8NB14 1042 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 PPM1EQ8WY54 764 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 DYDC2Q96IM9 177 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 PLIN2Q99541 437 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 OSMRQ99650 979 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 SMARCAD1Q9H4L7 1026 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 PRDM12Q9H4Q4 367 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 MICAL3Q7RTP6 2002 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 MBLAC1A4D2B0 266 aaPredicted RBP6.43□□□□□ -1.38
CPNE3-208ENST00000614678 C22orf31O95567 290 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 TECP42680 631 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 WDR5P61964 334 aaKnown RBP6.43□□□□□ -1.38
CPNE3-208ENST00000614678 MGAT3Q09327 533 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 PTK7Q13308 1070 aa6.43□□□□□ -1.38
CPNE3-208ENST00000614678 MYOCDQ8IZQ8 938 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms