RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 KIF17Q9P2E2 1029 aa14.74□□□□□ -0.05
CHD1-212ENST00000614616 SRPRBQ9Y5M8 271 aaKnown RBP14.74□□□□□ -0.05
CHD1-212ENST00000614616 PFDN6O15212 129 aa14.74□□□□□ -0.05
CHD1-212ENST00000614616 CYP2J2P51589 502 aa14.74□□□□□ -0.05
CHD1-212ENST00000614616 CCZ1BP86790 482 aa14.74□□□□□ -0.05
CHD1-212ENST00000614616 CCZ1P86791 482 aaPredicted RBP14.74□□□□□ -0.05
CHD1-212ENST00000614616 LRRC63Q05C16 580 aa14.74□□□□□ -0.05
CHD1-212ENST00000614616 KLHL38Q2WGJ6 581 aa14.74□□□□□ -0.05
CHD1-212ENST00000614616 KDM7AQ6ZMT4 941 aa14.74□□□□□ -0.05
CHD1-212ENST00000614616 FAM81AQ8TBF8 368 aa14.74□□□□□ -0.05
CHD1-212ENST00000614616 KLHL25Q9H0H3 589 aa14.74□□□□□ -0.05
CHD1-212ENST00000614616 XPOTO43592 962 aaKnown RBP14.74□□□□□ -0.05
CHD1-212ENST00000614616 DTNBO60941 627 aa14.74□□□□□ -0.05
CHD1-212ENST00000614616 ATP6V1G2O95670 118 aa14.74□□□□□ -0.05
CHD1-212ENST00000614616 CC2D2BQ6DHV5 1058 aa14.74□□□□□ -0.05
CHD1-212ENST00000614616 NYAP1Q6ZVC0 841 aa14.74□□□□□ -0.05
CHD1-212ENST00000614616 RHOT2Q8IXI1 618 aa14.74□□□□□ -0.05
CHD1-212ENST00000614616 CCT7Q99832 543 aa14.74□□□□□ -0.05
CHD1-212ENST00000614616 CCDC134Q9H6E4 229 aa14.74□□□□□ -0.05
CHD1-212ENST00000614616 MYO18AQ92614 2054 aaKnown RBP14.74□□□□□ -0.05
CHD1-212ENST00000614616 NOP56O00567 594 aaKnown RBP14.74□□□□□ -0.05
CHD1-212ENST00000614616 KITP10721 976 aa14.74□□□□□ -0.05
CHD1-212ENST00000614616 PTGISQ16647 500 aa14.74□□□□□ -0.05
CHD1-212ENST00000614616 KLC2Q9H0B6 622 aa14.74□□□□□ -0.05
CHD1-212ENST00000614616 KCNG1Q9UIX4 513 aa14.74□□□□□ -0.05
CHD1-212ENST00000614616 TJP3O95049 919 aa14.74□□□□□ -0.05
CHD1-212ENST00000614616 AEBP2Q6ZN18 517 aaPredicted RBP14.74□□□□□ -0.05
CHD1-212ENST00000614616 CDC42BPAQ5VT25 1732 aa14.74□□□□□ -0.05
CHD1-212ENST00000614616 BPIFB4P59827 614 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 RCN1Q15293 331 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 RFX8Q6ZV50 586 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 PDZD4Q76G19 769 aaPredicted RBP14.73□□□□□ -0.05
CHD1-212ENST00000614616 CCDC90BQ9GZT6 254 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 L3MBTL1Q9Y468 752 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 TOM1O60784 492 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 MYL10Q9BUA6 226 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 DCLRE1BQ9H816 532 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 ATAD3AQ9NVI7 634 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 GTPBP10A4D1E9 387 aaKnown RBP14.73□□□□□ -0.05
CHD1-212ENST00000614616 WBP4O75554 376 aaKnown RBP14.73□□□□□ -0.05
CHD1-212ENST00000614616 FAM200BP0CF97 657 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 HMGB2P26583 209 aaKnown RBP14.73□□□□□ -0.05
CHD1-212ENST00000614616 AKAP4Q5JQC9 854 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 CDR2LQ86X02 465 aaPredicted RBP14.73□□□□□ -0.05
CHD1-212ENST00000614616 ZNF654Q8IZM8 581 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 ADA2Q9NZK5 511 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 BLOC1S6Q9UL45 172 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 PARP3Q9Y6F1 533 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 POLR2BP30876 1174 aaKnown RBP14.73□□□□□ -0.05
CHD1-212ENST00000614616 NANOGNBQ7Z5D8 188 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 NSUN7Q8NE18 718 aaKnown RBP14.73□□□□□ -0.05
CHD1-212ENST00000614616 RNF34Q969K3 372 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 PBXIP1Q96AQ6 731 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 ZBED2Q9BTP6 218 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 FAM187AA6NFU0 413 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 MAP4K1Q92918 833 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 MLXIPLQ9NP71 852 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 IL10P22301 178 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 PDIK1LQ8N165 341 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 SH2D3CQ8N5H7 860 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 MRPL47Q9HD33 250 aaKnown RBP14.73□□□□□ -0.05
CHD1-212ENST00000614616 TTLL3Q9Y4R7 772 aa14.73□□□□□ -0.05
CHD1-212ENST00000614616 TFAP4Q01664 338 aa14.72□□□□□ -0.05
CHD1-212ENST00000614616 KIF19Q2TAC6 998 aa14.72□□□□□ -0.05
CHD1-212ENST00000614616 CCNI2Q6ZMN8 369 aaPredicted RBP14.72□□□□□ -0.05
CHD1-212ENST00000614616 FBXL5Q9UKA1 691 aa14.72□□□□□ -0.05
CHD1-212ENST00000614616 C16orf96A6NNT2 1141 aa14.72□□□□□ -0.05
CHD1-212ENST00000614616 OCRLQ01968 901 aa14.72□□□□□ -0.05
CHD1-212ENST00000614616 STX3Q13277 289 aa14.72□□□□□ -0.05
CHD1-212ENST00000614616 KIF22Q14807 665 aa14.72□□□□□ -0.05
CHD1-212ENST00000614616 SMG5Q9UPR3 1016 aaKnown RBP14.72□□□□□ -0.05
CHD1-212ENST00000614616 ADGRA3Q8IWK6 1321 aa14.72□□□□□ -0.05
CHD1-212ENST00000614616 ATP1A1P05023 1023 aaKnown RBP14.72□□□□□ -0.05
CHD1-212ENST00000614616 DDX42Q86XP3 938 aaKnown RBP eCLIP14.72□□□□□ -0.05
CHD1-212ENST00000614616 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.72□□□□□ -0.05
CHD1-212ENST00000614616 H7C0C1 242 aa14.72□□□□□ -0.05
CHD1-212ENST00000614616 HSPA4LO95757 839 aa14.72□□□□□ -0.05
CHD1-212ENST00000614616 ATP5OP48047 213 aa14.72□□□□□ -0.05
CHD1-212ENST00000614616 PUM3Q15397 648 aaKnown RBP14.72□□□□□ -0.05
CHD1-212ENST00000614616 UBE4BO95155 1302 aa14.72□□□□□ -0.05
CHD1-212ENST00000614616 GPATCH8Q9UKJ3 1502 aaKnown RBP14.72□□□□□ -0.05
CHD1-212ENST00000614616 LGALS16A8MUM7 142 aa14.72□□□□□ -0.05
CHD1-212ENST00000614616 CNBD2Q96M20 576 aa14.72□□□□□ -0.05
CHD1-212ENST00000614616 GOLGA4Q13439 2230 aaKnown RBP14.72□□□□□ -0.05
CHD1-212ENST00000614616 PHF20L1A8MW92 1017 aa14.72□□□□□ -0.05
CHD1-212ENST00000614616 CHRNA3P32297 505 aa14.72□□□□□ -0.05
CHD1-212ENST00000614616 ADCK5Q3MIX3 580 aa14.72□□□□□ -0.05
CHD1-212ENST00000614616 RBBP8NLQ8NC74 664 aaPredicted RBP14.72□□□□□ -0.05
CHD1-212ENST00000614616 ZNF555Q8NEP9 628 aa14.72□□□□□ -0.05
CHD1-212ENST00000614616 PCDHA12Q9UN75 941 aa14.72□□□□□ -0.05
CHD1-212ENST00000614616 CYP27A1Q02318 531 aa14.71□□□□□ -0.05
CHD1-212ENST00000614616 EFTUD2Q15029 972 aaKnown RBP eCLIP14.71□□□□□ -0.054e-6■■■□□ 17.6
CHD1-212ENST00000614616 SNF8Q96H20 258 aa14.71□□□□□ -0.05
CHD1-212ENST00000614616 NAF1Q96HR8 494 aaKnown RBP14.71□□□□□ -0.05
CHD1-212ENST00000614616 SNX25Q9H3E2 840 aa14.71□□□□□ -0.05
CHD1-212ENST00000614616 NPHS2Q9NP85 383 aa14.71□□□□□ -0.05
CHD1-212ENST00000614616 A0A1W2PP64 1363 aa14.71□□□□□ -0.05
CHD1-212ENST00000614616 COBLO75128 1261 aa14.71□□□□□ -0.05
CHD1-212ENST00000614616 FMNL1O95466 1100 aaPredicted RBP14.71□□□□□ -0.05
CHD1-212ENST00000614616 TNNI1P19237 187 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms