RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 MUTP22033 750 aa12.81□□□□□ -0.36
SLIRP-212ENST00000613856 CDC25AP30304 524 aa12.81□□□□□ -0.36
SLIRP-212ENST00000613856 KRT76Q01546 638 aa12.81□□□□□ -0.36
SLIRP-212ENST00000613856 KARSQ15046 597 aaKnown RBP12.81□□□□□ -0.36
SLIRP-212ENST00000613856 ZSCAN23Q3MJ62 389 aa12.81□□□□□ -0.36
SLIRP-212ENST00000613856 NCAPH2Q6IBW4 605 aa12.81□□□□□ -0.36
SLIRP-212ENST00000613856 KANK3Q6NY19 840 aa12.81□□□□□ -0.36
SLIRP-212ENST00000613856 KCNV1Q6PIU1 500 aa12.81□□□□□ -0.36
SLIRP-212ENST00000613856 ARMCX2Q7L311 632 aa12.81□□□□□ -0.36
SLIRP-212ENST00000613856 RDM1Q8NG50 284 aa12.81□□□□□ -0.36
SLIRP-212ENST00000613856 NEK9Q8TD19 979 aa12.81□□□□□ -0.36
SLIRP-212ENST00000613856 CALML4Q96GE6 196 aa12.81□□□□□ -0.36
SLIRP-212ENST00000613856 CCDC34Q96HJ3 373 aa12.81□□□□□ -0.36
SLIRP-212ENST00000613856 SENP7Q9BQF6 1050 aa12.81□□□□□ -0.36
SLIRP-212ENST00000613856 NT5C3AQ9H0P0 336 aa12.81□□□□□ -0.36
SLIRP-212ENST00000613856 TNMDQ9H2S6 317 aa12.81□□□□□ -0.36
SLIRP-212ENST00000613856 UNC45AQ9H3U1 944 aa12.81□□□□□ -0.36
SLIRP-212ENST00000613856 VTA1Q9NP79 307 aa12.81□□□□□ -0.36
SLIRP-212ENST00000613856 THEGQ9P2T0 379 aa12.81□□□□□ -0.36
SLIRP-212ENST00000613856 STK17AQ9UEE5 414 aa12.81□□□□□ -0.36
SLIRP-212ENST00000613856 MYH9P35579 1960 aaKnown RBP12.8□□□□□ -0.36
SLIRP-212ENST00000613856 ADCY6O43306 1168 aa12.8□□□□□ -0.36
SLIRP-212ENST00000613856 ZNF865P0CJ78 1059 aaPredicted RBP12.8□□□□□ -0.36
SLIRP-212ENST00000613856 TGFB3P10600 412 aa12.8□□□□□ -0.36
SLIRP-212ENST00000613856 RARBP10826 455 aa12.8□□□□□ -0.36
SLIRP-212ENST00000613856 PLCG1P19174 1290 aa12.8□□□□□ -0.36
SLIRP-212ENST00000613856 RPA1P27694 616 aa12.8□□□□□ -0.36
SLIRP-212ENST00000613856 STAT6P42226 847 aa12.8□□□□□ -0.36
SLIRP-212ENST00000613856 ZNF445P59923 1031 aa12.8□□□□□ -0.36
SLIRP-212ENST00000613856 GRB10Q13322 594 aa12.8□□□□□ -0.36
SLIRP-212ENST00000613856 LONRF3Q496Y0 759 aa12.8□□□□□ -0.36
SLIRP-212ENST00000613856 NAALADL2Q58DX5 795 aa12.8□□□□□ -0.36
SLIRP-212ENST00000613856 TMEM240Q5SV17 173 aa12.8□□□□□ -0.36
SLIRP-212ENST00000613856 RRAGBQ5VZM2 374 aa12.8□□□□□ -0.36
SLIRP-212ENST00000613856 ZNF746Q6NUN9 644 aaPredicted RBP12.8□□□□□ -0.36
SLIRP-212ENST00000613856 PDXDC2PQ6P474 469 aa12.8□□□□□ -0.36
SLIRP-212ENST00000613856 PDILTQ8N807 584 aa12.8□□□□□ -0.36
SLIRP-212ENST00000613856 GIMAP8Q8ND71 665 aaPredicted RBP12.8□□□□□ -0.36
SLIRP-212ENST00000613856 CNNM3Q8NE01 707 aa12.8□□□□□ -0.36
SLIRP-212ENST00000613856 DHX58Q96C10 678 aa12.8□□□□□ -0.36
SLIRP-212ENST00000613856 PNMA5Q96PV4 448 aa12.8□□□□□ -0.36
SLIRP-212ENST00000613856 UHRF1Q96T88 793 aaPredicted RBP12.8□□□□□ -0.36
SLIRP-212ENST00000613856 SDF4Q9BRK5 362 aa12.8□□□□□ -0.36
SLIRP-212ENST00000613856 POLR3CQ9BUI4 534 aaPredicted RBP12.8□□□□□ -0.36
SLIRP-212ENST00000613856 TUFT1Q9NNX1 390 aa12.8□□□□□ -0.36
SLIRP-212ENST00000613856 TCEAL9Q9UHQ7 104 aa12.8□□□□□ -0.36
SLIRP-212ENST00000613856 SERTAD1Q9UHV2 236 aa12.8□□□□□ -0.36
SLIRP-212ENST00000613856 HOOK1Q9UJC3 728 aaKnown RBP12.8□□□□□ -0.36
SLIRP-212ENST00000613856 TBX21Q9UL17 535 aa12.8□□□□□ -0.36
SLIRP-212ENST00000613856 NCOR1O75376 2440 aa12.8□□□□□ -0.36
SLIRP-212ENST00000613856 RBM47A0AV96 593 aaKnown RBP12.79□□□□□ -0.36
SLIRP-212ENST00000613856 EML1O00423 815 aa12.79□□□□□ -0.36
SLIRP-212ENST00000613856 ATP9AO75110 1047 aa12.79□□□□□ -0.36
SLIRP-212ENST00000613856 CSF2RAP15509 400 aa12.79□□□□□ -0.36
SLIRP-212ENST00000613856 SFNP31947 248 aa12.79□□□□□ -0.36
SLIRP-212ENST00000613856 CCT6AP40227 531 aaKnown RBP12.79□□□□□ -0.36
SLIRP-212ENST00000613856 JAK3P52333 1124 aa12.79□□□□□ -0.36
SLIRP-212ENST00000613856 TFF2Q03403 129 aa12.79□□□□□ -0.36
SLIRP-212ENST00000613856 EPHA7Q15375 998 aa12.79□□□□□ -0.36
SLIRP-212ENST00000613856 RASIP1Q5U651 963 aa12.79□□□□□ -0.36
SLIRP-212ENST00000613856 ANKRD33Q7Z3H0 272 aa12.79□□□□□ -0.36
SLIRP-212ENST00000613856 SMAP1Q8IYB5 467 aaPredicted RBP12.79□□□□□ -0.36
SLIRP-212ENST00000613856 CEP57L1Q8IYX8 460 aa12.79□□□□□ -0.36
SLIRP-212ENST00000613856 RASSF8Q8NHQ8 419 aa12.79□□□□□ -0.36
SLIRP-212ENST00000613856 ATXN2LQ8WWM7 1075 aaKnown RBP12.79□□□□□ -0.36
SLIRP-212ENST00000613856 CDK5RAP3Q96JB5 506 aa12.79□□□□□ -0.36
SLIRP-212ENST00000613856 UIMC1Q96RL1 719 aa12.79□□□□□ -0.36
SLIRP-212ENST00000613856 KATNBL1Q9H079 304 aa12.79□□□□□ -0.36
SLIRP-212ENST00000613856 JPH1Q9HDC5 661 aaPredicted RBP12.79□□□□□ -0.36
SLIRP-212ENST00000613856 CXXC1Q9P0U4 656 aaPredicted RBP12.79□□□□□ -0.36
SLIRP-212ENST00000613856 YBX2Q9Y2T7 364 aaKnown RBP12.79□□□□□ -0.36
SLIRP-212ENST00000613856 SYNRGQ9UMZ2 1314 aa12.79□□□□□ -0.36
SLIRP-212ENST00000613856 ARID2Q68CP9 1835 aa12.78□□□□□ -0.36
SLIRP-212ENST00000613856 WDR64B1ANS9 1081 aa12.78□□□□□ -0.36
SLIRP-212ENST00000613856 RBAK-RBAKDNI3L0D1 243 aa12.78□□□□□ -0.36
SLIRP-212ENST00000613856 MED24O75448 989 aa12.78□□□□□ -0.36
SLIRP-212ENST00000613856 TIMP1P01033 207 aa12.78□□□□□ -0.36
SLIRP-212ENST00000613856 MYL1P05976 194 aa12.78□□□□□ -0.36
SLIRP-212ENST00000613856 SPATA31C1P0DKV0 1188 aa12.78□□□□□ -0.36
SLIRP-212ENST00000613856 UBA1P22314 1058 aaKnown RBP12.78□□□□□ -0.36
SLIRP-212ENST00000613856 IGFBP4P22692 258 aa12.78□□□□□ -0.36
SLIRP-212ENST00000613856 ACLYP53396 1101 aa12.78□□□□□ -0.36
SLIRP-212ENST00000613856 NEDD9Q14511 834 aa12.78□□□□□ -0.36
SLIRP-212ENST00000613856 POSTNQ15063 836 aa12.78□□□□□ -0.36
SLIRP-212ENST00000613856 CAMK4Q16566 473 aa12.78□□□□□ -0.36
SLIRP-212ENST00000613856 CCSAPQ6IQ19 270 aaPredicted RBP12.78□□□□□ -0.36
SLIRP-212ENST00000613856 SEPT14Q6ZU15 432 aa12.78□□□□□ -0.36
SLIRP-212ENST00000613856 MIER3Q7Z3K6 550 aa12.78□□□□□ -0.36
SLIRP-212ENST00000613856 RNF180Q86T96 592 aa12.78□□□□□ -0.36
SLIRP-212ENST00000613856 FBXO16Q8IX29 292 aaPredicted RBP12.78□□□□□ -0.36
SLIRP-212ENST00000613856 SCFD2Q8WU76 684 aa12.78□□□□□ -0.36
SLIRP-212ENST00000613856 FAM122AQ96E09 287 aa12.78□□□□□ -0.36
SLIRP-212ENST00000613856 GAS2L1Q99501 681 aaPredicted RBP12.78□□□□□ -0.36
SLIRP-212ENST00000613856 HSD17B14Q9BPX1 270 aa12.78□□□□□ -0.36
SLIRP-212ENST00000613856 EIF2AK1Q9BQI3 630 aaKnown RBP12.78□□□□□ -0.36
SLIRP-212ENST00000613856 TINF2Q9BSI4 451 aa12.78□□□□□ -0.36
SLIRP-212ENST00000613856 PANK2Q9BZ23 570 aa12.78□□□□□ -0.36
SLIRP-212ENST00000613856 PPP1R12CQ9BZL4 782 aa12.78□□□□□ -0.36
SLIRP-212ENST00000613856 GZF1Q9H116 711 aaPredicted RBP12.78□□□□□ -0.36
SLIRP-212ENST00000613856 NKX2-4Q9H2Z4 354 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms