RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 RSPH10B2B2RC85 870 aa29.34■■■□□ 2.29
VEGFA-226ENST00000611736 NBNO60934 754 aa29.34■■■□□ 2.29
VEGFA-226ENST00000611736 RSPH10BP0C881 870 aa29.34■■■□□ 2.29
VEGFA-226ENST00000611736 ATP2B1P20020 1258 aa29.34■■■□□ 2.29
VEGFA-226ENST00000611736 RASIP1Q5U651 963 aa29.34■■■□□ 2.29
VEGFA-226ENST00000611736 TAF2Q6P1X5 1199 aa29.34■■■□□ 2.29
VEGFA-226ENST00000611736 HAS1Q92839 578 aa29.34■■■□□ 2.29
VEGFA-226ENST00000611736 MTIF3Q9H2K0 278 aaKnown RBP29.34■■■□□ 2.29
VEGFA-226ENST00000611736 IGSF9BQ9UPX0 1349 aa29.34■■■□□ 2.29
VEGFA-226ENST00000611736 ZBBXA8MT70 800 aa29.33■■■□□ 2.29
VEGFA-226ENST00000611736 PARNO95453 639 aaKnown RBP29.33■■■□□ 2.29
VEGFA-226ENST00000611736 GJB2P29033 226 aa29.33■■■□□ 2.29
VEGFA-226ENST00000611736 MBTPS1Q14703 1052 aa29.33■■■□□ 2.29
VEGFA-226ENST00000611736 UGCGQ16739 394 aa29.33■■■□□ 2.29
VEGFA-226ENST00000611736 B3GNT9Q6UX72 402 aa29.33■■■□□ 2.29
VEGFA-226ENST00000611736 RDM1Q8NG50 284 aa29.33■■■□□ 2.29
VEGFA-226ENST00000611736 VAV3Q9UKW4 847 aa29.33■■■□□ 2.29
VEGFA-226ENST00000611736 SMC3Q9UQE7 1217 aa29.33■■■□□ 2.29
VEGFA-226ENST00000611736 TBX3O15119 743 aa29.32■■■□□ 2.28
VEGFA-226ENST00000611736 CAND2O75155 1236 aa29.32■■■□□ 2.28
VEGFA-226ENST00000611736 ACTN1P12814 892 aa29.32■■■□□ 2.28
VEGFA-226ENST00000611736 GPR153Q6NV75 609 aa29.32■■■□□ 2.28
VEGFA-226ENST00000611736 DNAJB3Q8WWF6 145 aa29.32■■■□□ 2.28
VEGFA-226ENST00000611736 FAM49AQ9H0Q0 323 aaPredicted RBP29.32■■■□□ 2.28
VEGFA-226ENST00000611736 KIF28PB7ZC32 967 aa29.31■■■□□ 2.28
VEGFA-226ENST00000611736 BAG4O95429 457 aaKnown RBP29.31■■■□□ 2.28
VEGFA-226ENST00000611736 FAM109BQ6ICB4 259 aaPredicted RBP29.31■■■□□ 2.28
VEGFA-226ENST00000611736 BBXQ8WY36 941 aaPredicted RBP29.31■■■□□ 2.28
VEGFA-226ENST00000611736 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.31■■■□□ 2.28
VEGFA-226ENST00000611736 EML1O00423 815 aa29.3■■■□□ 2.28
VEGFA-226ENST00000611736 ZNF862O60290 1169 aa29.3■■■□□ 2.28
VEGFA-226ENST00000611736 NEMFO60524 1076 aa29.3■■■□□ 2.28
VEGFA-226ENST00000611736 CXCL10P02778 98 aa29.3■■■□□ 2.28
VEGFA-226ENST00000611736 PRKCEQ02156 737 aa29.3■■■□□ 2.28
VEGFA-226ENST00000611736 PPP2R5CQ13362 524 aa29.3■■■□□ 2.28
VEGFA-226ENST00000611736 CALCRLQ16602 461 aa29.3■■■□□ 2.28
VEGFA-226ENST00000611736 ZNF484Q5JVG2 852 aa29.3■■■□□ 2.28
VEGFA-226ENST00000611736 MTHFD1LQ6UB35 978 aa29.3■■■□□ 2.28
VEGFA-226ENST00000611736 RSPH3Q86UC2 560 aa29.3■■■□□ 2.28
VEGFA-226ENST00000611736 NOSTRINQ8IVI9 506 aa29.3■■■□□ 2.28
VEGFA-226ENST00000611736 SLFN12Q8IYM2 578 aa29.3■■■□□ 2.28
VEGFA-226ENST00000611736 FAM167AQ96KS9 214 aa29.3■■■□□ 2.28
VEGFA-226ENST00000611736 EVPLQ92817 2033 aa29.3■■■□□ 2.28
VEGFA-226ENST00000611736 COL1A2P08123 1366 aa29.29■■■□□ 2.28
VEGFA-226ENST00000611736 ZBTB42B2RXF5 422 aa29.29■■■□□ 2.28
VEGFA-226ENST00000611736 KLRC1P26715 233 aa29.29■■■□□ 2.28
VEGFA-226ENST00000611736 SMAD3P84022 425 aaKnown RBP29.29■■■□□ 2.28
VEGFA-226ENST00000611736 PCDHA2Q9Y5H9 948 aa29.29■■■□□ 2.28
VEGFA-226ENST00000611736 SLC4A7Q9Y6M7 1214 aa29.29■■■□□ 2.28
VEGFA-226ENST00000611736 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.28■■■□□ 2.28
VEGFA-226ENST00000611736 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.28■■■□□ 2.28
VEGFA-226ENST00000611736 GRXCR1A8MXD5 290 aa29.28■■■□□ 2.28
VEGFA-226ENST00000611736 OATP04181 439 aa29.28■■■□□ 2.28
VEGFA-226ENST00000611736 MCM7P33993 719 aa29.28■■■□□ 2.28
VEGFA-226ENST00000611736 RPAINQ86UA6 219 aa29.28■■■□□ 2.28
VEGFA-226ENST00000611736 BANK1Q8NDB2 785 aa29.28■■■□□ 2.28
VEGFA-226ENST00000611736 CHRNA1P02708 482 aa29.27■■■□□ 2.28
VEGFA-226ENST00000611736 TCTN1Q2MV58 587 aa29.27■■■□□ 2.28
VEGFA-226ENST00000611736 FAM26DQ5JW98 314 aa29.27■■■□□ 2.28
VEGFA-226ENST00000611736 MCTP1Q6DN14 999 aa29.27■■■□□ 2.28
VEGFA-226ENST00000611736 NCAPH2Q6IBW4 605 aa29.27■■■□□ 2.28
VEGFA-226ENST00000611736 CNKSR3Q6P9H4 555 aa29.27■■■□□ 2.28
VEGFA-226ENST00000611736 OSBPL7Q9BZF2 842 aa29.27■■■□□ 2.28
VEGFA-226ENST00000611736 NRBP2Q9NSY0 501 aa29.27■■■□□ 2.28
VEGFA-226ENST00000611736 H3BQV1 296 aa29.26■■■□□ 2.27
VEGFA-226ENST00000611736 U2AF2P26368 475 aaKnown RBP eCLIP29.26■■■□□ 2.272e-48■□□□□ 11.2
VEGFA-226ENST00000611736 CUL4AQ13619 759 aa29.26■■■□□ 2.27
VEGFA-226ENST00000611736 ZNF174Q15697 407 aa29.26■■■□□ 2.27
VEGFA-226ENST00000611736 TMEM60Q9H2L4 133 aa29.26■■■□□ 2.27
VEGFA-226ENST00000611736 CEP131Q9UPN4 1083 aa29.26■■■□□ 2.27
VEGFA-226ENST00000611736 MRPS6P82932 125 aaKnown RBP29.25■■■□□ 2.27
VEGFA-226ENST00000611736 MGAT3Q09327 533 aa29.25■■■□□ 2.27
VEGFA-226ENST00000611736 TMEM62Q0P6H9 643 aa29.25■■■□□ 2.27
VEGFA-226ENST00000611736 TTC38Q5R3I4 469 aa29.25■■■□□ 2.27
VEGFA-226ENST00000611736 NOL7Q9UMY1 257 aaKnown RBP29.25■■■□□ 2.27
VEGFA-226ENST00000611736 CDY2AQ9Y6F7 541 aa29.25■■■□□ 2.27
VEGFA-226ENST00000611736 SMIM35A0A1B0GVV1 85 aa29.24■■■□□ 2.27
VEGFA-226ENST00000611736 BAIAP3O94812 1187 aa29.24■■■□□ 2.27
VEGFA-226ENST00000611736 C22orf31O95567 290 aa29.24■■■□□ 2.27
VEGFA-226ENST00000611736 RPLP2P05387 115 aaKnown RBP29.24■■■□□ 2.27
VEGFA-226ENST00000611736 TXKP42681 527 aa29.24■■■□□ 2.27
VEGFA-226ENST00000611736 SPIRE1Q08AE8 756 aa29.24■■■□□ 2.27
VEGFA-226ENST00000611736 Q7L0L9 218 aa29.24■■■□□ 2.27
VEGFA-226ENST00000611736 MTMR9Q96QG7 549 aa29.24■■■□□ 2.27
VEGFA-226ENST00000611736 SEPT9Q9UHD8 586 aaPredicted RBP29.24■■■□□ 2.27
VEGFA-226ENST00000611736 PCDHA12Q9UN75 941 aa29.24■■■□□ 2.27
VEGFA-226ENST00000611736 SIP14410 1827 aa29.24■■■□□ 2.27
VEGFA-226ENST00000611736 ATP2A2P16615 1042 aaKnown RBP29.23■■■□□ 2.27
VEGFA-226ENST00000611736 PSMC5P62195 406 aa29.23■■■□□ 2.27
VEGFA-226ENST00000611736 NBR1Q14596 966 aa29.23■■■□□ 2.27
VEGFA-226ENST00000611736 METTL13Q8N6R0 699 aa29.23■■■□□ 2.27
VEGFA-226ENST00000611736 DBF4BQ8NFT6 615 aa29.23■■■□□ 2.27
VEGFA-226ENST00000611736 TTC12Q9H892 705 aaPredicted RBP29.23■■■□□ 2.27
VEGFA-226ENST00000611736 TMEM150BA6NC51 233 aa29.22■■■□□ 2.27
VEGFA-226ENST00000611736 GHRP10912 638 aa29.22■■■□□ 2.27
VEGFA-226ENST00000611736 PBX2P40425 430 aa29.22■■■□□ 2.27
VEGFA-226ENST00000611736 QARSP47897 775 aaKnown RBP29.22■■■□□ 2.27
VEGFA-226ENST00000611736 KCNJ6P48051 423 aa29.22■■■□□ 2.27
VEGFA-226ENST00000611736 TRAPPC10P48553 1259 aa29.22■■■□□ 2.27
VEGFA-226ENST00000611736 EPHA7Q15375 998 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms