RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 TRIM73Q86UV7 250 aa17.51■□□□□ 0.39
RTN1-209ENST00000611068 OR8K1Q8NGG5 319 aa17.51■□□□□ 0.39
RTN1-209ENST00000611068 ARL8AQ96BM9 186 aa17.51■□□□□ 0.39
RTN1-209ENST00000611068 SH2D4AQ9H788 454 aa17.51■□□□□ 0.39
RTN1-209ENST00000611068 PICK1Q9NRD5 415 aa17.51■□□□□ 0.39
RTN1-209ENST00000611068 FAM86B1E9PN63 330 aa17.51■□□□□ 0.39
RTN1-209ENST00000611068 FAM86B2P0C5J1 330 aa17.51■□□□□ 0.39
RTN1-209ENST00000611068 TUBB2AQ13885 445 aa17.51■□□□□ 0.39
RTN1-209ENST00000611068 PIK3R5Q8WYR1 880 aa17.51■□□□□ 0.39
RTN1-209ENST00000611068 CCDC114Q96M63 670 aa17.51■□□□□ 0.39
RTN1-209ENST00000611068 TUBB2BQ9BVA1 445 aa17.51■□□□□ 0.39
RTN1-209ENST00000611068 VCAM1P19320 739 aa17.5■□□□□ 0.39
RTN1-209ENST00000611068 GPR162Q16538 588 aa17.5■□□□□ 0.39
RTN1-209ENST00000611068 ECM1Q16610 540 aa17.5■□□□□ 0.39
RTN1-209ENST00000611068 HPS3Q969F9 1004 aa17.5■□□□□ 0.39
RTN1-209ENST00000611068 HOOK2Q96ED9 719 aa17.5■□□□□ 0.39
RTN1-209ENST00000611068 EEF2KMTQ96G04 330 aa17.5■□□□□ 0.39
RTN1-209ENST00000611068 MED15Q96RN5 788 aa17.5■□□□□ 0.39
RTN1-209ENST00000611068 RPAP3Q9H6T3 665 aaPredicted RBP17.5■□□□□ 0.39
RTN1-209ENST00000611068 CCPG1Q9ULG6 757 aa17.5■□□□□ 0.39
RTN1-209ENST00000611068 MYO6Q9UM54 1294 aa17.5■□□□□ 0.39
RTN1-209ENST00000611068 GDAQ9Y2T3 454 aa17.5■□□□□ 0.39
RTN1-209ENST00000611068 ARFGEF1Q9Y6D6 1849 aa17.5■□□□□ 0.39
RTN1-209ENST00000611068 COQ9O75208 318 aa17.5■□□□□ 0.39
RTN1-209ENST00000611068 ALAS1P13196 640 aa17.5■□□□□ 0.39
RTN1-209ENST00000611068 PTPRAP18433 802 aa17.5■□□□□ 0.39
RTN1-209ENST00000611068 ZNF76P36508 570 aa17.5■□□□□ 0.39
RTN1-209ENST00000611068 AMPD2Q01433 879 aa17.5■□□□□ 0.39
RTN1-209ENST00000611068 PLCB4Q15147 1175 aa17.5■□□□□ 0.39
RTN1-209ENST00000611068 TTMPQ5BVD1 217 aa17.5■□□□□ 0.39
RTN1-209ENST00000611068 SH2D3CQ8N5H7 860 aa17.5■□□□□ 0.39
RTN1-209ENST00000611068 ACRBPQ8NEB7 543 aa17.5■□□□□ 0.39
RTN1-209ENST00000611068 PURBQ96QR8 312 aaKnown RBP17.5■□□□□ 0.39
RTN1-209ENST00000611068 PCDHA12Q9UN75 941 aa17.5■□□□□ 0.39
RTN1-209ENST00000611068 LAD1O00515 517 aa17.49■□□□□ 0.39
RTN1-209ENST00000611068 NFIBO00712 420 aa17.49■□□□□ 0.39
RTN1-209ENST00000611068 PRPHP41219 470 aa17.49■□□□□ 0.39
RTN1-209ENST00000611068 SPATS2Q86XZ4 545 aaKnown RBP17.49■□□□□ 0.39
RTN1-209ENST00000611068 APOBEC3FQ8IUX4 373 aaKnown RBP17.49■□□□□ 0.39
RTN1-209ENST00000611068 KLHL23Q8NBE8 558 aa17.49■□□□□ 0.39
RTN1-209ENST00000611068 SNX29Q8TEQ0 813 aa17.49■□□□□ 0.39
RTN1-209ENST00000611068 TBC1D31Q96DN5 1066 aa17.49■□□□□ 0.39
RTN1-209ENST00000611068 PKD2L1Q9P0L9 805 aa17.49■□□□□ 0.39
RTN1-209ENST00000611068 FEM1BQ9UK73 627 aa17.49■□□□□ 0.39
RTN1-209ENST00000611068 FAM163BP0C2L3 166 aa17.49■□□□□ 0.39
RTN1-209ENST00000611068 SEC24CP53992 1094 aa17.49■□□□□ 0.39
RTN1-209ENST00000611068 C1QTNF12Q5T7M4 302 aa17.49■□□□□ 0.39
RTN1-209ENST00000611068 DCAF15Q66K64 600 aa17.49■□□□□ 0.39
RTN1-209ENST00000611068 KCNK18Q7Z418 384 aa17.49■□□□□ 0.39
RTN1-209ENST00000611068 SCYL3Q8IZE3 742 aa17.49■□□□□ 0.39
RTN1-209ENST00000611068 DRAXINQ8NBI3 349 aaPredicted RBP17.49■□□□□ 0.39
RTN1-209ENST00000611068 MAGEC3Q8TD91 643 aa17.49■□□□□ 0.39
RTN1-209ENST00000611068 ZNF473Q8WTR7 871 aaKnown RBP17.49■□□□□ 0.39
RTN1-209ENST00000611068 RSRC1Q96IZ7 334 aaKnown RBP17.49■□□□□ 0.39
RTN1-209ENST00000611068 MMS19Q96T76 1030 aa17.49■□□□□ 0.39
RTN1-209ENST00000611068 RANBP17Q9H2T7 1088 aaKnown RBP17.49■□□□□ 0.39
RTN1-209ENST00000611068 G3BP2Q9UN86 482 aaKnown RBP17.49■□□□□ 0.39
RTN1-209ENST00000611068 SKOR1P84550 965 aa17.48■□□□□ 0.39
RTN1-209ENST00000611068 EAPPQ56P03 285 aaPredicted RBP17.48■□□□□ 0.39
RTN1-209ENST00000611068 NT5DC1Q5TFE4 455 aa17.48■□□□□ 0.39
RTN1-209ENST00000611068 CCDC181Q5TID7 509 aa17.48■□□□□ 0.39
RTN1-209ENST00000611068 MICALCLQ6ZW33 695 aa17.48■□□□□ 0.39
RTN1-209ENST00000611068 BZW1Q7L1Q6 419 aaKnown RBP17.48■□□□□ 0.39
RTN1-209ENST00000611068 DYMQ7RTS9 669 aa17.48■□□□□ 0.39
RTN1-209ENST00000611068 CPLX3Q8WVH0 158 aa17.48■□□□□ 0.39
RTN1-209ENST00000611068 SLF1Q9BQI6 1058 aa17.48■□□□□ 0.39
RTN1-209ENST00000611068 YIPF3Q9GZM5 350 aa17.48■□□□□ 0.39
RTN1-209ENST00000611068 SAMSN1Q9NSI8 373 aaKnown RBP17.48■□□□□ 0.39
RTN1-209ENST00000611068 HDAC6Q9UBN7 1215 aa17.48■□□□□ 0.39
RTN1-209ENST00000611068 RPN1P04843 607 aaKnown RBP17.48■□□□□ 0.39
RTN1-209ENST00000611068 GUCY1A3Q02108 690 aa17.48■□□□□ 0.39
RTN1-209ENST00000611068 TMEM266Q2M3C6 531 aa17.48■□□□□ 0.39
RTN1-209ENST00000611068 CAPRIN2Q6IMN6 1127 aaKnown RBP17.48■□□□□ 0.39
RTN1-209ENST00000611068 PPP4R3AQ6IN85 833 aa17.48■□□□□ 0.39
RTN1-209ENST00000611068 NSMCE1Q8WV22 266 aa17.48■□□□□ 0.39
RTN1-209ENST00000611068 CDK5RAP3Q96JB5 506 aa17.48■□□□□ 0.39
RTN1-209ENST00000611068 DNM1LO00429 736 aa17.47■□□□□ 0.39
RTN1-209ENST00000611068 GRB10Q13322 594 aa17.47■□□□□ 0.39
RTN1-209ENST00000611068 KCTD16Q68DU8 428 aa17.47■□□□□ 0.39
RTN1-209ENST00000611068 SPATA20Q8TB22 786 aa17.47■□□□□ 0.39
RTN1-209ENST00000611068 KLRG1Q96E93 195 aa17.47■□□□□ 0.39
RTN1-209ENST00000611068 STAMBPL1Q96FJ0 436 aa17.47■□□□□ 0.39
RTN1-209ENST00000611068 PAIP2Q9BPZ3 127 aaKnown RBP17.47■□□□□ 0.39
RTN1-209ENST00000611068 CCSER1Q9C0I3 900 aa17.47■□□□□ 0.39
RTN1-209ENST00000611068 KIAA1683Q9H0B3 1180 aa17.47■□□□□ 0.39
RTN1-209ENST00000611068 CTNND2Q9UQB3 1225 aa17.47■□□□□ 0.39
RTN1-209ENST00000611068 NFE2L3Q9Y4A8 694 aa17.47■□□□□ 0.39
RTN1-209ENST00000611068 GCOM1H8Y6P7 765 aaPredicted RBP17.47■□□□□ 0.39
RTN1-209ENST00000611068 POLR2MP0CAP2 368 aa17.47■□□□□ 0.39
RTN1-209ENST00000611068 LSP1P33241 339 aa17.47■□□□□ 0.39
RTN1-209ENST00000611068 DCPSQ96C86 337 aaKnown RBP17.47■□□□□ 0.39
RTN1-209ENST00000611068 ATG4CQ96DT6 458 aa17.47■□□□□ 0.39
RTN1-209ENST00000611068 PNMA5Q96PV4 448 aa17.47■□□□□ 0.39
RTN1-209ENST00000611068 PAGR1Q9BTK6 254 aa17.47■□□□□ 0.39
RTN1-209ENST00000611068 ZNF536O15090 1300 aa17.47■□□□□ 0.39
RTN1-209ENST00000611068 MEIS1O00470 390 aa17.46■□□□□ 0.39
RTN1-209ENST00000611068 SRGAP2O75044 1071 aa17.46■□□□□ 0.39
RTN1-209ENST00000611068 MIS18BP1Q6P0N0 1132 aa17.46■□□□□ 0.39
RTN1-209ENST00000611068 CCNI2Q6ZMN8 369 aaPredicted RBP17.46■□□□□ 0.39
RTN1-209ENST00000611068 KRT26Q7Z3Y9 468 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms