RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 PLOD1Q02809 727 aaPredicted RBP5.11□□□□□ -1.59
HDDC2-208ENST00000609021 MCL1Q07820 350 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 PDE4DQ08499 809 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 SIM2Q14190 667 aaPredicted RBP5.11□□□□□ -1.59
HDDC2-208ENST00000609021 WDR44Q5JSH3 913 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 PRR23CQ6ZRP0 262 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 LRRN4CLQ8ND94 238 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 PIP4K2CQ8TBX8 421 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 FBXO41Q8TF61 875 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 BRF1Q92994 677 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 TSR2Q969E8 191 aaKnown RBP5.11□□□□□ -1.59
HDDC2-208ENST00000609021 CCDC77Q9BR77 488 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 OSBPL5Q9H0X9 879 aaPredicted RBP5.11□□□□□ -1.59
HDDC2-208ENST00000609021 RIC8AQ9NPQ8 531 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 PIH1D3Q9NQM4 214 aaKnown RBP5.11□□□□□ -1.59
HDDC2-208ENST00000609021 GID8Q9NWU2 228 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 DDX19BQ9UMR2 479 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 PLAAQ9Y263 795 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 FAM32AQ9Y421 112 aaKnown RBP5.11□□□□□ -1.59
HDDC2-208ENST00000609021 HEY1Q9Y5J3 304 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 COMMD3-BMI1R4GMX3 469 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 ADAMTS7Q9UKP4 1686 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 hCG_1984214I3L0E3 225 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 E2F3O00716 465 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 PLCG2P16885 1265 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 LRPAP1P30533 357 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 HSD17B2P37059 387 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 IGHMBP2P38935 993 aaKnown RBP5.11□□□□□ -1.59
HDDC2-208ENST00000609021 GBE1Q04446 702 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 NFX1Q12986 1120 aaKnown RBP5.11□□□□□ -1.59
HDDC2-208ENST00000609021 ZC3H12BQ5HYM0 836 aaKnown RBP5.11□□□□□ -1.59
HDDC2-208ENST00000609021 FAM209AQ5JX71 171 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 ANKRD20A2Q5SQ80 823 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 ANKRD20A1Q5TYW2 823 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 RNF220Q5VTB9 566 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 ANKRD20A3Q5VUR7 823 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 DPF3Q92784 378 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 GIMAP5Q96F15 307 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 PPP1R13BQ96KQ4 1090 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 ALPK1Q96QP1 1244 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 TUBGCP5Q96RT8 1024 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 SLF1Q9BQI6 1058 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 AP1M1Q9BXS5 423 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 GBA3Q9H227 469 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 PSTPIP2Q9H939 334 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 QTRT2Q9H974 415 aaKnown RBP5.11□□□□□ -1.59
HDDC2-208ENST00000609021 VIPAS39Q9H9C1 493 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 NEK6Q9HC98 313 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 POLMQ9NP87 494 aaPredicted RBP5.11□□□□□ -1.59
HDDC2-208ENST00000609021 ZC4H2Q9NQZ6 224 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 MRPL39Q9NYK5 338 aaKnown RBP5.11□□□□□ -1.59
HDDC2-208ENST00000609021 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.11□□□□□ -1.592e-6■□□□□ 9.7
HDDC2-208ENST00000609021 RIMKLBQ9ULI2 386 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 STRIP2Q9ULQ0 834 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 SIPA1L3O60292 1781 aaPredicted RBP5.11□□□□□ -1.59
HDDC2-208ENST00000609021 N4BP2Q86UW6 1770 aaPredicted RBP5.11□□□□□ -1.59
HDDC2-208ENST00000609021 IQANK1A0A1B0GTG1 560 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 F8W810 466 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 GCOM1H8Y6P7 765 aaPredicted RBP5.11□□□□□ -1.59
HDDC2-208ENST00000609021 PSMA3P25788 255 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 RFC5P40937 340 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 EXOSC9Q06265 439 aaKnown RBP5.11□□□□□ -1.59
HDDC2-208ENST00000609021 CUL1Q13616 776 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 PKP1Q13835 747 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 PDE3AQ14432 1141 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 SGSM1Q2NKQ1 1148 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 Q3C1V9 767 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 DEPDC1Q5TB30 811 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 PHLDB3Q6NSJ2 640 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 RUFY4Q6ZNE9 571 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 ZNF600Q6ZNG1 722 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 ANKS4BQ8N8V4 417 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 STKLD1Q8NE28 680 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 PDZD8Q8NEN9 1154 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 SVIPQ8NHG7 77 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 IRGQQ8WZA9 623 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 RAPGEF5Q92565 580 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 IQCDQ96DY2 449 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 RRP36Q96EU6 259 aaKnown RBP5.11□□□□□ -1.59
HDDC2-208ENST00000609021 ZNF570Q96NI8 536 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 PLIN2Q99541 437 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 GMIPQ9P107 970 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 HMGXB4Q9UGU5 601 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 STAG3Q9UJ98 1225 aa5.11□□□□□ -1.59
HDDC2-208ENST00000609021 BLMP54132 1417 aaPredicted RBP5.11□□□□□ -1.59
HDDC2-208ENST00000609021 WDR33Q9C0J8 1336 aaKnown RBP5.11□□□□□ -1.59
HDDC2-208ENST00000609021 MAP2P11137 1827 aaKnown RBP5.1□□□□□ -1.59
HDDC2-208ENST00000609021 SETD1BQ9UPS6 1966 aaKnown RBP5.1□□□□□ -1.59
HDDC2-208ENST00000609021 GPR75-ASB3A0A0A6YYF3 556 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 STRNO43815 780 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 ADCY3O60266 1144 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 PRMT3O60678 531 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 ATG7O95352 703 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 GLULP15104 373 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 COPAP53621 1224 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 RARSP54136 660 aaKnown RBP5.1□□□□□ -1.59
HDDC2-208ENST00000609021 MRPS25P82663 173 aaKnown RBP5.1□□□□□ -1.59
HDDC2-208ENST00000609021 ADAM9Q13443 819 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 UBE4AQ14139 1066 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms