RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 GLG1Q92896 1179 aa13.07□□□□□ -0.32
LINC00539-204ENST00000608957 GBP4Q96PP9 640 aa13.07□□□□□ -0.32
LINC00539-204ENST00000608957 GJB4Q9NTQ9 266 aa13.07□□□□□ -0.32
LINC00539-204ENST00000608957 PRRC2BQ5JSZ5 2229 aaKnown RBP13.07□□□□□ -0.32
LINC00539-204ENST00000608957 TTC3P53804 2025 aa13.06□□□□□ -0.32
LINC00539-204ENST00000608957 EPOPA6NHQ4 379 aa13.06□□□□□ -0.32
LINC00539-204ENST00000608957 H3BQV1 296 aa13.06□□□□□ -0.32
LINC00539-204ENST00000608957 IPO5O00410 1097 aaKnown RBP13.06□□□□□ -0.32
LINC00539-204ENST00000608957 F13A1P00488 732 aa13.06□□□□□ -0.32
LINC00539-204ENST00000608957 CHRNA1P02708 482 aa13.06□□□□□ -0.32
LINC00539-204ENST00000608957 CA3P07451 260 aa13.06□□□□□ -0.32
LINC00539-204ENST00000608957 GNAT1P11488 350 aa13.06□□□□□ -0.32
LINC00539-204ENST00000608957 INSRRP14616 1297 aa13.06□□□□□ -0.32
LINC00539-204ENST00000608957 ATP4AP20648 1035 aa13.06□□□□□ -0.32
LINC00539-204ENST00000608957 FOSBP53539 338 aa13.06□□□□□ -0.32
LINC00539-204ENST00000608957 PRR16Q569H4 304 aa13.06□□□□□ -0.32
LINC00539-204ENST00000608957 PLEKHG4Q58EX7 1191 aa13.06□□□□□ -0.32
LINC00539-204ENST00000608957 MCTP2Q6DN12 878 aa13.06□□□□□ -0.32
LINC00539-204ENST00000608957 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.06□□□□□ -0.32
LINC00539-204ENST00000608957 USP38Q8NB14 1042 aa13.06□□□□□ -0.32
LINC00539-204ENST00000608957 DAGLBQ8NCG7 672 aa13.06□□□□□ -0.32
LINC00539-204ENST00000608957 MAFAQ8NHW3 353 aaPredicted RBP13.06□□□□□ -0.32
LINC00539-204ENST00000608957 BICD2Q8TD16 824 aa13.06□□□□□ -0.32
LINC00539-204ENST00000608957 GJA10Q969M2 543 aa13.06□□□□□ -0.32
LINC00539-204ENST00000608957 PCDHA4Q9UN74 947 aa13.06□□□□□ -0.32
LINC00539-204ENST00000608957 KCNJ14Q9UNX9 436 aa13.06□□□□□ -0.32
LINC00539-204ENST00000608957 KIAA1671Q9BY89 1806 aa13.06□□□□□ -0.32
LINC00539-204ENST00000608957 PRUNE2Q8WUY3 3088 aa13.05□□□□□ -0.32
LINC00539-204ENST00000608957 ABHD14A-ACY1A0A1B0GW23 586 aa13.05□□□□□ -0.32
LINC00539-204ENST00000608957 LCHNA4D1U4 455 aa13.05□□□□□ -0.32
LINC00539-204ENST00000608957 CAND2O75155 1236 aa13.05□□□□□ -0.32
LINC00539-204ENST00000608957 STAT5BP51692 787 aa13.05□□□□□ -0.32
LINC00539-204ENST00000608957 IGBP1P78318 339 aa13.05□□□□□ -0.32
LINC00539-204ENST00000608957 SETQ01105 290 aaPredicted RBP13.05□□□□□ -0.32
LINC00539-204ENST00000608957 NFKBIBQ15653 356 aa13.05□□□□□ -0.32
LINC00539-204ENST00000608957 PPP2R2DQ66LE6 453 aa13.05□□□□□ -0.32
LINC00539-204ENST00000608957 CLEC17AQ6ZS10 378 aa13.05□□□□□ -0.32
LINC00539-204ENST00000608957 PLPPR4Q7Z2D5 763 aa13.05□□□□□ -0.32
LINC00539-204ENST00000608957 RPAINQ86UA6 219 aa13.05□□□□□ -0.32
LINC00539-204ENST00000608957 BLIDQ8IZY5 108 aa13.05□□□□□ -0.32
LINC00539-204ENST00000608957 SLC17A8Q8NDX2 589 aa13.05□□□□□ -0.32
LINC00539-204ENST00000608957 TBCKQ8TEA7 893 aa13.05□□□□□ -0.32
LINC00539-204ENST00000608957 DNAJB3Q8WWF6 145 aa13.05□□□□□ -0.32
LINC00539-204ENST00000608957 WASF1Q92558 559 aa13.05□□□□□ -0.32
LINC00539-204ENST00000608957 C8orf76Q96K31 380 aa13.05□□□□□ -0.32
LINC00539-204ENST00000608957 ZNF577Q9BSK1 485 aa13.05□□□□□ -0.32
LINC00539-204ENST00000608957 SLC28A3Q9HAS3 691 aa13.05□□□□□ -0.32
LINC00539-204ENST00000608957 TUBE1Q9UJT0 475 aa13.05□□□□□ -0.32
LINC00539-204ENST00000608957 MYH15Q9Y2K3 1946 aa13.05□□□□□ -0.32
LINC00539-204ENST00000608957 COL4A6Q14031 1691 aa13.05□□□□□ -0.32
LINC00539-204ENST00000608957 RALGAPA2Q2PPJ7 1873 aa13.04□□□□□ -0.32
LINC00539-204ENST00000608957 ZBTB42B2RXF5 422 aa13.04□□□□□ -0.32
LINC00539-204ENST00000608957 RFXAPO00287 272 aa13.04□□□□□ -0.32
LINC00539-204ENST00000608957 MSH4O15457 936 aa13.04□□□□□ -0.32
LINC00539-204ENST00000608957 BAG4O95429 457 aaKnown RBP13.04□□□□□ -0.32
LINC00539-204ENST00000608957 TDP2O95551 362 aa13.04□□□□□ -0.32
LINC00539-204ENST00000608957 KCNJ6P48051 423 aa13.04□□□□□ -0.32
LINC00539-204ENST00000608957 TAP1Q03518 808 aa13.04□□□□□ -0.32
LINC00539-204ENST00000608957 PHF20Q9BVI0 1012 aa13.04□□□□□ -0.32
LINC00539-204ENST00000608957 AZI2Q9H6S1 392 aa13.04□□□□□ -0.32
LINC00539-204ENST00000608957 CERS4Q9HA82 394 aa13.04□□□□□ -0.32
LINC00539-204ENST00000608957 TRPC6Q9Y210 931 aa13.04□□□□□ -0.32
LINC00539-204ENST00000608957 ATP6V1DQ9Y5K8 247 aa13.04□□□□□ -0.32
LINC00539-204ENST00000608957 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.03□□□□□ -0.32
LINC00539-204ENST00000608957 POTEB3A0JP26 581 aa13.03□□□□□ -0.32
LINC00539-204ENST00000608957 RRN3P2A6NIE6 340 aa13.03□□□□□ -0.32
LINC00539-204ENST00000608957 GJB5O95377 273 aa13.03□□□□□ -0.32
LINC00539-204ENST00000608957 GHRP10912 638 aa13.03□□□□□ -0.32
LINC00539-204ENST00000608957 USP11P51784 963 aa13.03□□□□□ -0.32
LINC00539-204ENST00000608957 IKBKEQ14164 716 aa13.03□□□□□ -0.32
LINC00539-204ENST00000608957 LPIN1Q14693 890 aa13.03□□□□□ -0.32
LINC00539-204ENST00000608957 EARS2Q5JPH6 523 aaKnown RBP13.03□□□□□ -0.32
LINC00539-204ENST00000608957 ZNF746Q6NUN9 644 aaPredicted RBP13.03□□□□□ -0.32
LINC00539-204ENST00000608957 SWSAP1Q6NVH7 229 aa13.03□□□□□ -0.32
LINC00539-204ENST00000608957 FAM117BQ6P1L5 589 aa13.03□□□□□ -0.32
LINC00539-204ENST00000608957 TAF2Q6P1X5 1199 aa13.03□□□□□ -0.32
LINC00539-204ENST00000608957 POTEBQ6S5H4 581 aa13.03□□□□□ -0.32
LINC00539-204ENST00000608957 FBXO18Q8NFZ0 1043 aa13.03□□□□□ -0.32
LINC00539-204ENST00000608957 OXER1Q8TDS5 423 aa13.03□□□□□ -0.32
LINC00539-204ENST00000608957 SLC5A5Q92911 643 aa13.03□□□□□ -0.32
LINC00539-204ENST00000608957 MBOAT7Q96N66 472 aa13.03□□□□□ -0.32
LINC00539-204ENST00000608957 ZNF302Q9NR11 478 aa13.03□□□□□ -0.32
LINC00539-204ENST00000608957 TBC1D22BQ9NU19 505 aa13.03□□□□□ -0.32
LINC00539-204ENST00000608957 CDY2AQ9Y6F7 541 aa13.03□□□□□ -0.32
LINC00539-204ENST00000608957 REV3LO60673 3130 aa13.02□□□□□ -0.32
LINC00539-204ENST00000608957 ARID2Q68CP9 1835 aa13.02□□□□□ -0.32
LINC00539-204ENST00000608957 CYP3A7-CYP3A51PA0A087WV96 503 aa13.02□□□□□ -0.33
LINC00539-204ENST00000608957 BACH1O14867 736 aa13.02□□□□□ -0.33
LINC00539-204ENST00000608957 TLL1O43897 1013 aa13.02□□□□□ -0.33
LINC00539-204ENST00000608957 CYP3A7P24462 503 aa13.02□□□□□ -0.33
LINC00539-204ENST00000608957 MCM4P33991 863 aa13.02□□□□□ -0.33
LINC00539-204ENST00000608957 GUCY1B3Q02153 619 aa13.02□□□□□ -0.33
LINC00539-204ENST00000608957 RESTQ13127 1097 aa13.02□□□□□ -0.33
LINC00539-204ENST00000608957 TRIM29Q14134 588 aa13.02□□□□□ -0.33
LINC00539-204ENST00000608957 UGCGQ16739 394 aa13.02□□□□□ -0.33
LINC00539-204ENST00000608957 Q4G0T1 1027 aa13.02□□□□□ -0.33
LINC00539-204ENST00000608957 MIS18BP1Q6P0N0 1132 aa13.02□□□□□ -0.33
LINC00539-204ENST00000608957 PDXDC2PQ6P474 469 aa13.02□□□□□ -0.33
LINC00539-204ENST00000608957 MTHFD1LQ6UB35 978 aa13.02□□□□□ -0.33
LINC00539-204ENST00000608957 ATP8B4Q8TF62 1192 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms