RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 EARS2Q5JPH6 523 aaKnown RBP18.69■□□□□ 0.58
LINC00240-203ENST00000606878 FAM26DQ5JW98 314 aa18.69■□□□□ 0.58
LINC00240-203ENST00000606878 ZNF697Q5TEC3 545 aa18.69■□□□□ 0.58
LINC00240-203ENST00000606878 CNKSR3Q6P9H4 555 aa18.69■□□□□ 0.58
LINC00240-203ENST00000606878 RUFY4Q6ZNE9 571 aa18.69■□□□□ 0.58
LINC00240-203ENST00000606878 MIER3Q7Z3K6 550 aa18.69■□□□□ 0.58
LINC00240-203ENST00000606878 ETNPPLQ8TBG4 499 aa18.69■□□□□ 0.58
LINC00240-203ENST00000606878 BBXQ8WY36 941 aaPredicted RBP18.69■□□□□ 0.58
LINC00240-203ENST00000606878 TMX3Q96JJ7 454 aa18.69■□□□□ 0.58
LINC00240-203ENST00000606878 UNC45AQ9H3U1 944 aa18.69■□□□□ 0.58
LINC00240-203ENST00000606878 MSRAQ9UJ68 235 aa18.69■□□□□ 0.58
LINC00240-203ENST00000606878 PCDHA2Q9Y5H9 948 aa18.69■□□□□ 0.58
LINC00240-203ENST00000606878 KAT6AQ92794 2004 aa18.68■□□□□ 0.58
LINC00240-203ENST00000606878 ABHD14A-ACY1A0A1B0GW23 586 aa18.68■□□□□ 0.58
LINC00240-203ENST00000606878 TBX3O15119 743 aa18.68■□□□□ 0.58
LINC00240-203ENST00000606878 SLC37A4O43826 429 aa18.68■□□□□ 0.58
LINC00240-203ENST00000606878 BAG4O95429 457 aaKnown RBP18.68■□□□□ 0.58
LINC00240-203ENST00000606878 CTSHP09668 335 aa18.68■□□□□ 0.58
LINC00240-203ENST00000606878 ATP2A2P16615 1042 aaKnown RBP18.68■□□□□ 0.58
LINC00240-203ENST00000606878 ATP4AP20648 1035 aa18.68■□□□□ 0.58
LINC00240-203ENST00000606878 KLRC1P26715 233 aa18.68■□□□□ 0.58
LINC00240-203ENST00000606878 IKBKEQ14164 716 aa18.68■□□□□ 0.58
LINC00240-203ENST00000606878 MBTPS1Q14703 1052 aa18.68■□□□□ 0.58
LINC00240-203ENST00000606878 Q7L0L9 218 aa18.68■□□□□ 0.58
LINC00240-203ENST00000606878 FBXO18Q8NFZ0 1043 aa18.68■□□□□ 0.58
LINC00240-203ENST00000606878 PHOSPHO2Q8TCD6 241 aa18.68■□□□□ 0.58
LINC00240-203ENST00000606878 DNAJB3Q8WWF6 145 aa18.68■□□□□ 0.58
LINC00240-203ENST00000606878 FAM167AQ96KS9 214 aa18.68■□□□□ 0.58
LINC00240-203ENST00000606878 FAM205CA6NFA0 338 aa18.67■□□□□ 0.58
LINC00240-203ENST00000606878 EFCAB14O75071 495 aa18.67■□□□□ 0.58
LINC00240-203ENST00000606878 KCNJ6P48051 423 aa18.67■□□□□ 0.58
LINC00240-203ENST00000606878 RAB30Q15771 203 aa18.67■□□□□ 0.58
LINC00240-203ENST00000606878 IER5Q5VY09 327 aa18.67■□□□□ 0.58
LINC00240-203ENST00000606878 MTHFD1LQ6UB35 978 aa18.67■□□□□ 0.58
LINC00240-203ENST00000606878 TRMT1LQ7Z2T5 733 aaKnown RBP18.67■□□□□ 0.58
LINC00240-203ENST00000606878 NME8Q8N427 588 aa18.67■□□□□ 0.58
LINC00240-203ENST00000606878 TRAPPC12Q8WVT3 735 aa18.67■□□□□ 0.58
LINC00240-203ENST00000606878 SEPT8Q92599 483 aa18.67■□□□□ 0.58
LINC00240-203ENST00000606878 FAM49AQ9H0Q0 323 aaPredicted RBP18.67■□□□□ 0.58
LINC00240-203ENST00000606878 SEMA6BQ9H3T3 888 aa18.67■□□□□ 0.58
LINC00240-203ENST00000606878 KCNMB3Q9NPA1 279 aa18.67■□□□□ 0.58
LINC00240-203ENST00000606878 CEP131Q9UPN4 1083 aa18.67■□□□□ 0.58
LINC00240-203ENST00000606878 KIF3AQ9Y496 699 aa18.67■□□□□ 0.58
LINC00240-203ENST00000606878 COL1A2P08123 1366 aa18.67■□□□□ 0.58
LINC00240-203ENST00000606878 SMIM35A0A1B0GVV1 85 aa18.66■□□□□ 0.58
LINC00240-203ENST00000606878 CHRNA1P02708 482 aa18.66■□□□□ 0.58
LINC00240-203ENST00000606878 DNAJB2P25686 324 aa18.66■□□□□ 0.58
LINC00240-203ENST00000606878 B3GNT9Q6UX72 402 aa18.66■□□□□ 0.58
LINC00240-203ENST00000606878 SLFN12Q8IYM2 578 aa18.66■□□□□ 0.58
LINC00240-203ENST00000606878 DBF4BQ8NFT6 615 aa18.66■□□□□ 0.58
LINC00240-203ENST00000606878 TIFAQ96CG3 184 aa18.66■□□□□ 0.58
LINC00240-203ENST00000606878 SLC9A7Q96T83 725 aa18.66■□□□□ 0.58
LINC00240-203ENST00000606878 PBX4Q9BYU1 374 aa18.66■□□□□ 0.58
LINC00240-203ENST00000606878 FOXP1Q9H334 677 aaPredicted RBP18.66■□□□□ 0.58
LINC00240-203ENST00000606878 MTMR10Q9NXD2 777 aa18.66■□□□□ 0.58
LINC00240-203ENST00000606878 TMEM265A0A087WTH1 108 aa18.65■□□□□ 0.58
LINC00240-203ENST00000606878 KIF28PB7ZC32 967 aa18.65■□□□□ 0.58
LINC00240-203ENST00000606878 GNL2Q13823 731 aaKnown RBP18.65■□□□□ 0.58
LINC00240-203ENST00000606878 PLEKHG4Q58EX7 1191 aa18.65■□□□□ 0.58
LINC00240-203ENST00000606878 HAS1Q92839 578 aa18.65■□□□□ 0.58
LINC00240-203ENST00000606878 ZBTB10Q96DT7 871 aa18.65■□□□□ 0.58
LINC00240-203ENST00000606878 FAM161BQ96MY7 647 aa18.65■□□□□ 0.58
LINC00240-203ENST00000606878 M0QZ92 97 aa18.64■□□□□ 0.57
LINC00240-203ENST00000606878 MAGEB2O15479 319 aa18.64■□□□□ 0.57
LINC00240-203ENST00000606878 CD2BP2O95400 341 aaKnown RBP18.64■□□□□ 0.57
LINC00240-203ENST00000606878 OATP04181 439 aa18.64■□□□□ 0.57
LINC00240-203ENST00000606878 ATP2B1P20020 1258 aa18.64■□□□□ 0.57
LINC00240-203ENST00000606878 PBX2P40425 430 aa18.64■□□□□ 0.57
LINC00240-203ENST00000606878 MRPS6P82932 125 aaKnown RBP18.64■□□□□ 0.57
LINC00240-203ENST00000606878 PPP2R5CQ13362 524 aa18.64■□□□□ 0.57
LINC00240-203ENST00000606878 PCDHA11Q9Y5I1 949 aa18.64■□□□□ 0.57
LINC00240-203ENST00000606878 TET1Q8NFU7 2136 aa18.64■□□□□ 0.57
LINC00240-203ENST00000606878 ZBTB42B2RXF5 422 aa18.63■□□□□ 0.57
LINC00240-203ENST00000606878 ZNF862O60290 1169 aa18.63■□□□□ 0.57
LINC00240-203ENST00000606878 DKC1O60832 514 aaKnown RBP eCLIP18.63■□□□□ 0.57
LINC00240-203ENST00000606878 RABGGTBP53611 331 aa18.63■□□□□ 0.57
LINC00240-203ENST00000606878 PSMC5P62195 406 aa18.63■□□□□ 0.57
LINC00240-203ENST00000606878 CALCRLQ16602 461 aa18.63■□□□□ 0.57
LINC00240-203ENST00000606878 XKR3Q5GH77 459 aa18.63■□□□□ 0.57
LINC00240-203ENST00000606878 METTL13Q8N6R0 699 aa18.63■□□□□ 0.57
LINC00240-203ENST00000606878 APBB2Q92870 758 aa18.63■□□□□ 0.57
LINC00240-203ENST00000606878 ZNF576Q9H609 170 aa18.63■□□□□ 0.57
LINC00240-203ENST00000606878 SLC28A3Q9HAS3 691 aa18.63■□□□□ 0.57
LINC00240-203ENST00000606878 VAV3Q9UKW4 847 aa18.63■□□□□ 0.57
LINC00240-203ENST00000606878 PCDHA12Q9UN75 941 aa18.63■□□□□ 0.57
LINC00240-203ENST00000606878 CDY2AQ9Y6F7 541 aa18.63■□□□□ 0.57
LINC00240-203ENST00000606878 IGSF9BQ9UPX0 1349 aa18.63■□□□□ 0.57
LINC00240-203ENST00000606878 DDX11L8A8MPP1 907 aa18.62■□□□□ 0.57
LINC00240-203ENST00000606878 EML1O00423 815 aa18.62■□□□□ 0.57
LINC00240-203ENST00000606878 WDR5P61964 334 aaKnown RBP18.62■□□□□ 0.57
LINC00240-203ENST00000606878 PRKCEQ02156 737 aa18.62■□□□□ 0.57
LINC00240-203ENST00000606878 MGAT3Q09327 533 aa18.62■□□□□ 0.57
LINC00240-203ENST00000606878 TMEM62Q0P6H9 643 aa18.62■□□□□ 0.57
LINC00240-203ENST00000606878 EPHA7Q15375 998 aa18.62■□□□□ 0.57
LINC00240-203ENST00000606878 UGCGQ16739 394 aa18.62■□□□□ 0.57
LINC00240-203ENST00000606878 TCTN1Q2MV58 587 aa18.62■□□□□ 0.57
LINC00240-203ENST00000606878 HERC6Q8IVU3 1022 aa18.62■□□□□ 0.57
LINC00240-203ENST00000606878 KIAA0319LQ8IZA0 1049 aa18.62■□□□□ 0.57
LINC00240-203ENST00000606878 USP38Q8NB14 1042 aa18.62■□□□□ 0.57
LINC00240-203ENST00000606878 ZBED2Q9BTP6 218 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms