RNA–Protein interactions for RNA: ENST00000606426.1

CUX2P1-201, Transcript of cut like homeobox 2 pseudogene 1, humanhuman

BASIC

Gene CUX2P1, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2P1-201ENST00000606426 MAGEB2O15479 319 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 PQBP1O60828 265 aaKnown RBP8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 CAPN15O75808 1086 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 SLITRK3O94933 977 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 CLTBP09497 229 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 MARK3P27448 753 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 HOXC8P31273 242 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 UBA7P41226 1012 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 PRKCEQ02156 737 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 PTK7Q13308 1070 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 BFSP2Q13515 415 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 PLCB4Q15147 1175 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 GRIK4Q16099 956 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 PTGISQ16647 500 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 CSPP1Q1MSJ5 1256 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 LRRC26Q2I0M4 334 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 FOXD4L5Q5VV16 416 aaPredicted RBP8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 TAF2Q6P1X5 1199 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 FAM173BQ6P4H8 233 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 RSPH3Q86UC2 560 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 TRIM50Q86XT4 487 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 TPH2Q8IWU9 490 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 FAM126BQ8IXS8 530 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 ZNF579Q8NAF0 562 aaKnown RBP8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 RETREG2Q8NC44 543 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 FOXD4L4Q8WXT5 416 aaPredicted RBP8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 CCDC43Q96MW1 224 aaKnown RBP8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 NACC1Q96RE7 527 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 LXNQ9BS40 222 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 NIFKQ9BYG3 293 aaKnown RBP8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 RNPEPQ9H4A4 650 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 HDAC6Q9UBN7 1215 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 ATP11BQ9Y2G3 1177 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 ZDHHC9Q9Y397 364 aa8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 SRPRBQ9Y5M8 271 aaKnown RBP8.39□□□□□ -1.07
CUX2P1-201ENST00000606426 MBLAC1A4D2B0 266 aaPredicted RBP8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 GAS2O43903 313 aaKnown RBP8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 CAND2O75155 1236 aa8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 PARNO95453 639 aaKnown RBP8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 CD4P01730 458 aa8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 INSRRP14616 1297 aa8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 NCLP19338 710 aaKnown RBP8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 TMOD1P28289 359 aa8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 YWHABP31946 246 aaKnown RBP8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 CCT6AP40227 531 aaKnown RBP8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 MLLT1Q03111 559 aaPredicted RBP8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 CEBPZQ03701 1054 aaKnown RBP8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 TLE2Q04725 743 aa8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 DNM1Q05193 864 aaKnown RBP8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 NME8Q8N427 588 aa8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 BANK1Q8NDB2 785 aa8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 CAGE1Q8TC20 777 aa8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 SNX29Q8TEQ0 813 aa8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 LMBR1Q8WVP7 490 aa8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 CALML4Q96GE6 196 aa8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 DYDC2Q96IM9 177 aa8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 CDK5RAP3Q96JB5 506 aa8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 ANKEF1Q9NU02 776 aa8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 TFIP11Q9UBB9 837 aaKnown RBP8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 CCDC39Q9UFE4 941 aa8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 SEPT9Q9UHD8 586 aaPredicted RBP8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 TUBE1Q9UJT0 475 aa8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 TELO2Q9Y4R8 837 aa8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 PCDHA2Q9Y5H9 948 aa8.38□□□□□ -1.07
CUX2P1-201ENST00000606426 SCN10AQ9Y5Y9 1956 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 DDX11L8A8MPP1 907 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 PITPNM1O00562 1244 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 ZNF862O60290 1169 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 B4GALT4O60513 344 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 CUTAO60888 179 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 ATP4AP20648 1035 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 MARCKSP29966 332 aaPredicted RBP8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 RFC5P40937 340 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 ME1P48163 572 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 DNM2P50570 870 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 ADAM17P78536 824 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 CDC42EP1Q00587 391 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 CYP4A11Q02928 519 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 FAAP100Q0VG06 881 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 CTTNQ14247 550 aaKnown RBP8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 UGCGQ16739 394 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 FOXD4L6Q3SYB3 417 aaPredicted RBP8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 HYIQ5T013 277 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 GDF6Q6KF10 455 aaPredicted RBP8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 MTHFD1LQ6UB35 978 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 FOXD4L3Q6VB84 417 aaPredicted RBP8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 FAM43BQ6ZT52 329 aaPredicted RBP8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 RPAINQ86UA6 219 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 CABP7Q86V35 215 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 SERINC5Q86VE9 423 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 CATSPER3Q86XQ3 398 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 RASSF8Q8NHQ8 419 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 SLC7A3Q8WY07 619 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 CEP170P1Q96L14 293 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 SPATA32Q96LK8 384 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 PYM1Q9BRP8 204 aaKnown RBP8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 FTOQ9C0B1 505 aaKnown RBP eCLIP8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 CCSER1Q9C0I3 900 aa8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 TRMT13Q9NUP7 481 aaKnown RBP8.37□□□□□ -1.07
CUX2P1-201ENST00000606426 TMEM39AQ9NV64 488 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms