RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 ATP4AP20648 1035 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 YY1P25490 414 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 ADD1P35611 737 aaKnown RBP5.16□□□□□ -1.58
LINC01109-201ENST00000603837 ZNF76P36508 570 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 CD86P42081 329 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 HDAC4P56524 1084 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 GNGT1P63211 74 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 GABREP78334 506 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 PPFIA1Q13136 1202 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 C1orf228Q6PIY5 440 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 YTHDF3Q7Z739 585 aaKnown RBP5.16□□□□□ -1.58
LINC01109-201ENST00000603837 GALNT5Q7Z7M9 940 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 NLRP14Q86W24 1093 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 TPH2Q8IWU9 490 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 CKAP2LQ8IYA6 745 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 C2orf69Q8N8R5 385 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 ARL8AQ96BM9 186 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 CDK5RAP3Q96JB5 506 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 MPHOSPH8Q99549 860 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 SH3GL1Q99961 368 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 LRRCC1Q9C099 1032 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 UBE2OQ9C0C9 1292 aaKnown RBP5.16□□□□□ -1.58
LINC01109-201ENST00000603837 ZNF408Q9H9D4 720 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 HELLSQ9NRZ9 838 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 ATP8A2Q9NTI2 1148 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 ZFATQ9P243 1243 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 DDX19BQ9UMR2 479 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 C15orf41Q9Y2V0 281 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 BZW2Q9Y6E2 419 aaKnown RBP5.16□□□□□ -1.58
LINC01109-201ENST00000603837 MSH6P52701 1360 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 MAP3K5Q99683 1374 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 ATP9BO43861 1147 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 UPP2O95045 317 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 GUCA1CO95843 209 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 ZSCAN22P10073 491 aaPredicted RBP5.16□□□□□ -1.58
LINC01109-201ENST00000603837 MYBP10242 640 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 PDE6CP51160 858 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 NEK4P51957 841 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 BLMHQ13867 455 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 BTG3Q14201 252 aaPredicted RBP5.16□□□□□ -1.58
LINC01109-201ENST00000603837 SEMA3AQ14563 771 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 CAMK4Q16566 473 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 WDR44Q5JSH3 913 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 TRIM65Q6PJ69 517 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 C1orf122Q6ZSJ8 110 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 NANOGNBQ7Z5D8 188 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 ZNF354CQ86Y25 554 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 FUKQ8N0W3 1084 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 MEIOBQ8N635 442 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 LINC00469Q8N7U9 141 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 ERMNQ8TAM6 284 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 TEKT4Q8WW24 435 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 SPATA17Q96L03 361 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 ACTR5Q9H9F9 607 aaPredicted RBP5.16□□□□□ -1.58
LINC01109-201ENST00000603837 GALNT8Q9NY28 637 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 RRN3Q9NYV6 651 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 DACH1Q9UI36 760 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 LAMP5Q9UJQ1 280 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 RAB21Q9UL25 225 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 PAIP2BQ9ULR5 123 aaKnown RBP5.16□□□□□ -1.58
LINC01109-201ENST00000603837 AFG3L2Q9Y4W6 797 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 ATP6V1DQ9Y5K8 247 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 CDK12Q9NYV4 1490 aaPredicted RBP5.16□□□□□ -1.58
LINC01109-201ENST00000603837 POLR3AO14802 1390 aaPredicted RBP5.16□□□□□ -1.58
LINC01109-201ENST00000603837 A6NHS1 94 aa5.15□□□□□ -1.58
LINC01109-201ENST00000603837 USP17L5A8MUK1 530 aa5.15□□□□□ -1.58
LINC01109-201ENST00000603837 PCP11498 1178 aaKnown RBP5.15□□□□□ -1.58
LINC01109-201ENST00000603837 MAPK8P45983 427 aa5.15□□□□□ -1.58
LINC01109-201ENST00000603837 TUFMP49411 452 aaKnown RBP5.15□□□□□ -1.58
LINC01109-201ENST00000603837 AARSP49588 968 aaKnown RBP eCLIP5.15□□□□□ -1.58
LINC01109-201ENST00000603837 GNAQP50148 359 aa5.15□□□□□ -1.58
LINC01109-201ENST00000603837 TMF1P82094 1093 aa5.15□□□□□ -1.58
LINC01109-201ENST00000603837 MXRA7P84157 204 aa5.15□□□□□ -1.58
LINC01109-201ENST00000603837 AP1B1Q10567 949 aa5.15□□□□□ -1.58
LINC01109-201ENST00000603837 CBX3Q13185 183 aa5.15□□□□□ -1.58
LINC01109-201ENST00000603837 DRP2Q13474 957 aa5.15□□□□□ -1.58
LINC01109-201ENST00000603837 NCOA4Q13772 614 aa5.15□□□□□ -1.58
LINC01109-201ENST00000603837 WHAMMP3Q1A5X7 153 aa5.15□□□□□ -1.58
LINC01109-201ENST00000603837 INTS3Q68E01 1043 aaKnown RBP5.15□□□□□ -1.58
LINC01109-201ENST00000603837 MRPL14Q6P1L8 145 aaKnown RBP5.15□□□□□ -1.58
LINC01109-201ENST00000603837 ITPRIPQ8IWB1 547 aa5.15□□□□□ -1.58
LINC01109-201ENST00000603837 DYDC1Q8WWB3 177 aa5.15□□□□□ -1.58
LINC01109-201ENST00000603837 MAIP1Q8WWC4 291 aa5.15□□□□□ -1.58
LINC01109-201ENST00000603837 SGCDQ92629 289 aa5.15□□□□□ -1.58
LINC01109-201ENST00000603837 STAMBPL1Q96FJ0 436 aa5.15□□□□□ -1.58
LINC01109-201ENST00000603837 NUP58Q9BVL2 599 aa5.15□□□□□ -1.58
LINC01109-201ENST00000603837 EHD4Q9H223 541 aa5.15□□□□□ -1.58
LINC01109-201ENST00000603837 KCTD10Q9H3F6 313 aa5.15□□□□□ -1.58
LINC01109-201ENST00000603837 EBF2Q9HAK2 575 aa5.15□□□□□ -1.58
LINC01109-201ENST00000603837 ANO10Q9NW15 660 aa5.15□□□□□ -1.58
LINC01109-201ENST00000603837 PCSK1NQ9UHG2 260 aa5.15□□□□□ -1.58
LINC01109-201ENST00000603837 CDC42BPGQ6DT37 1551 aa5.15□□□□□ -1.58
LINC01109-201ENST00000603837 SETD1AO15047 1707 aaKnown RBP5.15□□□□□ -1.58
LINC01109-201ENST00000603837 LSM1O15116 133 aaKnown RBP5.15□□□□□ -1.59
LINC01109-201ENST00000603837 LUC7L3O95232 432 aaKnown RBP5.15□□□□□ -1.59
LINC01109-201ENST00000603837 SYF2O95926 243 aaKnown RBP5.15□□□□□ -1.59
LINC01109-201ENST00000603837 MYBL1P10243 752 aa5.15□□□□□ -1.59
LINC01109-201ENST00000603837 SFPQP23246 707 aaKnown RBP eCLIP5.15□□□□□ -1.59
LINC01109-201ENST00000603837 CCNCP24863 283 aa5.15□□□□□ -1.59
LINC01109-201ENST00000603837 PBLDP30039 288 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms