RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 KIF28PB7ZC32 967 aa24.73■■□□□ 1.55
PPFIA3-208ENST00000602726 RPLP2P05387 115 aaKnown RBP24.73■■□□□ 1.55
PPFIA3-208ENST00000602726 MYOGP15173 224 aa24.73■■□□□ 1.55
PPFIA3-208ENST00000602726 KRT2P35908 639 aa24.73■■□□□ 1.55
PPFIA3-208ENST00000602726 GRIN2CQ14957 1233 aa24.73■■□□□ 1.55
PPFIA3-208ENST00000602726 PLEKHG4Q58EX7 1191 aa24.73■■□□□ 1.55
PPFIA3-208ENST00000602726 NEK8Q86SG6 692 aa24.73■■□□□ 1.55
PPFIA3-208ENST00000602726 CCDC83Q8IWF9 413 aa24.73■■□□□ 1.55
PPFIA3-208ENST00000602726 SEPT8Q92599 483 aa24.73■■□□□ 1.55
PPFIA3-208ENST00000602726 GJA10Q969M2 543 aa24.73■■□□□ 1.55
PPFIA3-208ENST00000602726 MBOAT7Q96N66 472 aa24.73■■□□□ 1.55
PPFIA3-208ENST00000602726 FAM49AQ9H0Q0 323 aaPredicted RBP24.73■■□□□ 1.55
PPFIA3-208ENST00000602726 DISC1Q9NRI5 854 aa24.73■■□□□ 1.55
PPFIA3-208ENST00000602726 GABBR1Q9UBS5 961 aa24.73■■□□□ 1.55
PPFIA3-208ENST00000602726 PCDHA2Q9Y5H9 948 aa24.73■■□□□ 1.55
PPFIA3-208ENST00000602726 MAFBQ9Y5Q3 323 aaPredicted RBP24.73■■□□□ 1.55
PPFIA3-208ENST00000602726 MYO9BQ13459 2157 aa24.73■■□□□ 1.55
PPFIA3-208ENST00000602726 CHMP2AO43633 222 aa24.72■■□□□ 1.55
PPFIA3-208ENST00000602726 CHRNA1P02708 482 aa24.72■■□□□ 1.55
PPFIA3-208ENST00000602726 JAK3P52333 1124 aa24.72■■□□□ 1.55
PPFIA3-208ENST00000602726 ST3GAL1Q11201 340 aa24.72■■□□□ 1.55
PPFIA3-208ENST00000602726 MYLIPQ8WY64 445 aa24.72■■□□□ 1.55
PPFIA3-208ENST00000602726 COL6A3P12111 3177 aa24.72■■□□□ 1.55
PPFIA3-208ENST00000602726 MYH9P35579 1960 aaKnown RBP24.71■■□□□ 1.55
PPFIA3-208ENST00000602726 CHD9Q3L8U1 2897 aa24.71■■□□□ 1.55
PPFIA3-208ENST00000602726 RBAK-RBAKDNI3L0D1 243 aa24.71■■□□□ 1.55
PPFIA3-208ENST00000602726 GCFC2P16383 781 aaKnown RBP24.71■■□□□ 1.55
PPFIA3-208ENST00000602726 ATP4AP20648 1035 aa24.71■■□□□ 1.55
PPFIA3-208ENST00000602726 SFNP31947 248 aa24.71■■□□□ 1.55
PPFIA3-208ENST00000602726 FOSBP53539 338 aa24.71■■□□□ 1.55
PPFIA3-208ENST00000602726 ZNF484Q5JVG2 852 aa24.71■■□□□ 1.55
PPFIA3-208ENST00000602726 PPP2R2DQ66LE6 453 aa24.71■■□□□ 1.55
PPFIA3-208ENST00000602726 MTHFD1LQ6UB35 978 aa24.71■■□□□ 1.55
PPFIA3-208ENST00000602726 NAP1L4Q99733 375 aaKnown RBP24.71■■□□□ 1.55
PPFIA3-208ENST00000602726 UNC45AQ9H3U1 944 aa24.71■■□□□ 1.55
PPFIA3-208ENST00000602726 COL1A2P08123 1366 aa24.7■■□□□ 1.55
PPFIA3-208ENST00000602726 CCNT1O60563 726 aaKnown RBP24.7■■□□□ 1.54
PPFIA3-208ENST00000602726 PSMD10O75832 226 aa24.7■■□□□ 1.54
PPFIA3-208ENST00000602726 KLRC1P26715 233 aa24.7■■□□□ 1.54
PPFIA3-208ENST00000602726 DEFB103AP81534 67 aa24.7■■□□□ 1.54
PPFIA3-208ENST00000602726 MRPS6P82932 125 aaKnown RBP24.7■■□□□ 1.54
PPFIA3-208ENST00000602726 MGAT3Q09327 533 aa24.7■■□□□ 1.54
PPFIA3-208ENST00000602726 NR5A1Q13285 461 aa24.7■■□□□ 1.54
PPFIA3-208ENST00000602726 RABEP1Q15276 862 aa24.7■■□□□ 1.54
PPFIA3-208ENST00000602726 IER5Q5VY09 327 aa24.7■■□□□ 1.54
PPFIA3-208ENST00000602726 PPP4R3AQ6IN85 833 aa24.7■■□□□ 1.54
PPFIA3-208ENST00000602726 TRMT1LQ7Z2T5 733 aaKnown RBP24.7■■□□□ 1.54
PPFIA3-208ENST00000602726 ETNPPLQ8TBG4 499 aa24.7■■□□□ 1.54
PPFIA3-208ENST00000602726 BBXQ8WY36 941 aaPredicted RBP24.7■■□□□ 1.54
PPFIA3-208ENST00000602726 LLPHQ9BRT6 129 aaKnown RBP24.7■■□□□ 1.54
PPFIA3-208ENST00000602726 ZBED2Q9BTP6 218 aa24.7■■□□□ 1.54
PPFIA3-208ENST00000602726 OSBPL7Q9BZF2 842 aa24.7■■□□□ 1.54
PPFIA3-208ENST00000602726 SH2B1Q9NRF2 756 aaPredicted RBP24.7■■□□□ 1.54
PPFIA3-208ENST00000602726 CDY2AQ9Y6F7 541 aa24.7■■□□□ 1.54
PPFIA3-208ENST00000602726 SMIM35A0A1B0GVV1 85 aa24.69■■□□□ 1.54
PPFIA3-208ENST00000602726 M0QZ92 97 aa24.69■■□□□ 1.54
PPFIA3-208ENST00000602726 SLC37A4O43826 429 aa24.69■■□□□ 1.54
PPFIA3-208ENST00000602726 TLL1O43897 1013 aa24.69■■□□□ 1.54
PPFIA3-208ENST00000602726 MMP1P03956 469 aa24.69■■□□□ 1.54
PPFIA3-208ENST00000602726 FOSL2P15408 326 aa24.69■■□□□ 1.54
PPFIA3-208ENST00000602726 KRT40Q6A162 431 aa24.69■■□□□ 1.54
PPFIA3-208ENST00000602726 MIER3Q7Z3K6 550 aa24.69■■□□□ 1.54
PPFIA3-208ENST00000602726 APBB2Q92870 758 aa24.69■■□□□ 1.54
PPFIA3-208ENST00000602726 FAM167AQ96KS9 214 aa24.69■■□□□ 1.54
PPFIA3-208ENST00000602726 IFIH1Q9BYX4 1025 aaKnown RBP24.69■■□□□ 1.54
PPFIA3-208ENST00000602726 CDH23Q9H251 3354 aa24.69■■□□□ 1.54
PPFIA3-208ENST00000602726 IGSF9BQ9UPX0 1349 aa24.68■■□□□ 1.54
PPFIA3-208ENST00000602726 AMHP03971 560 aa24.68■■□□□ 1.54
PPFIA3-208ENST00000602726 CA3P07451 260 aa24.68■■□□□ 1.54
PPFIA3-208ENST00000602726 GHRP10912 638 aa24.68■■□□□ 1.54
PPFIA3-208ENST00000602726 EARS2Q5JPH6 523 aaKnown RBP24.68■■□□□ 1.54
PPFIA3-208ENST00000602726 TMCO2Q7Z6W1 182 aaPredicted RBP24.68■■□□□ 1.54
PPFIA3-208ENST00000602726 NME8Q8N427 588 aa24.68■■□□□ 1.54
PPFIA3-208ENST00000602726 RDM1Q8NG50 284 aa24.68■■□□□ 1.54
PPFIA3-208ENST00000602726 BTBD18B2RXH4 712 aa24.67■■□□□ 1.54
PPFIA3-208ENST00000602726 MARCH6O60337 910 aa24.67■■□□□ 1.54
PPFIA3-208ENST00000602726 TMEM62Q0P6H9 643 aa24.67■■□□□ 1.54
PPFIA3-208ENST00000602726 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.67■■□□□ 1.54
PPFIA3-208ENST00000602726 DIS3L2Q8IYB7 885 aaKnown RBP24.67■■□□□ 1.54
PPFIA3-208ENST00000602726 TNFRSF25Q93038 417 aa24.67■■□□□ 1.54
PPFIA3-208ENST00000602726 FAM20AQ96MK3 541 aa24.67■■□□□ 1.54
PPFIA3-208ENST00000602726 PRDM12Q9H4Q4 367 aa24.67■■□□□ 1.54
PPFIA3-208ENST00000602726 NRBP2Q9NSY0 501 aa24.67■■□□□ 1.54
PPFIA3-208ENST00000602726 CEP131Q9UPN4 1083 aa24.67■■□□□ 1.54
PPFIA3-208ENST00000602726 TRPV2Q9Y5S1 764 aa24.67■■□□□ 1.54
PPFIA3-208ENST00000602726 FAM205CA6NFA0 338 aa24.66■■□□□ 1.54
PPFIA3-208ENST00000602726 ZBTB42B2RXF5 422 aa24.66■■□□□ 1.54
PPFIA3-208ENST00000602726 ST18O60284 1047 aa24.66■■□□□ 1.54
PPFIA3-208ENST00000602726 OATP04181 439 aa24.66■■□□□ 1.54
PPFIA3-208ENST00000602726 LPIN1Q14693 890 aa24.66■■□□□ 1.54
PPFIA3-208ENST00000602726 SAFBQ15424 915 aaKnown RBP eCLIP24.66■■□□□ 1.54
PPFIA3-208ENST00000602726 FBXO47Q5MNV8 452 aa24.66■■□□□ 1.54
PPFIA3-208ENST00000602726 GAS2L1Q99501 681 aaPredicted RBP24.66■■□□□ 1.54
PPFIA3-208ENST00000602726 ZNF862O60290 1169 aa24.65■■□□□ 1.54
PPFIA3-208ENST00000602726 GJB5O95377 273 aa24.65■■□□□ 1.54
PPFIA3-208ENST00000602726 HMGN5P82970 282 aaKnown RBP24.65■■□□□ 1.54
PPFIA3-208ENST00000602726 PRKCEQ02156 737 aa24.65■■□□□ 1.54
PPFIA3-208ENST00000602726 MKRN4PQ13434 485 aaPredicted RBP24.65■■□□□ 1.54
PPFIA3-208ENST00000602726 UGCGQ16739 394 aa24.65■■□□□ 1.54
PPFIA3-208ENST00000602726 FAM117BQ6P1L5 589 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms