RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 RPS8P62241 208 aaKnown RBP9.34□□□□□ -0.91
CSMD1-216ENST00000602557 DYNLT1P63172 113 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 FAM26FQ5R3K3 315 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 NBNO60934 754 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 EAPPQ56P03 285 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-216ENST00000602557 RAPH1Q70E73 1250 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 RETREG2Q8NC44 543 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 BBOF1Q8ND07 529 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 ZNF473Q8WTR7 871 aaKnown RBP9.34□□□□□ -0.91
CSMD1-216ENST00000602557 PTPRTO14522 1441 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 GARSP41250 739 aaKnown RBP9.33□□□□□ -0.92
CSMD1-216ENST00000602557 DR1Q01658 176 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 ANO5Q75V66 913 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 PANX2Q96RD6 677 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 MAGEF1Q9HAY2 307 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 RTEL1Q9NZ71 1219 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 MAGED2Q9UNF1 606 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-216ENST00000602557 XPO1O14980 1071 aaKnown RBP9.33□□□□□ -0.92
CSMD1-216ENST00000602557 DNAJC9Q8WXX5 260 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 CPP00450 1065 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 KRT31Q15323 416 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 BZW1Q7L1Q6 419 aaKnown RBP9.33□□□□□ -0.92
CSMD1-216ENST00000602557 THAP11Q96EK4 314 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 ATP6V1G3Q96LB4 118 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 SERPINI1Q99574 410 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 CCDC90BQ9GZT6 254 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 CYP4F11Q9HBI6 524 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 CCPG1Q9ULG6 757 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 MRPL11Q9Y3B7 192 aaKnown RBP9.33□□□□□ -0.92
CSMD1-216ENST00000602557 ECEL1O95672 775 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 HLA-DPA1P20036 260 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 PDIA3P30101 505 aaKnown RBP9.33□□□□□ -0.92
CSMD1-216ENST00000602557 HSPA2P54652 639 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 ADPGKQ9BRR6 497 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 CDCA7Q9BWT1 371 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-216ENST00000602557 APOL6Q9BWW8 343 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 BTDP43251 543 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 CERKLQ49MI3 558 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-216ENST00000602557 GALNT17Q6IS24 598 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-216ENST00000602557 LRRC37BQ96QE4 947 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 KIFC3Q9BVG8 833 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 ZMYM3Q14202 1370 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 GTPBP10A4D1E9 387 aaKnown RBP9.33□□□□□ -0.92
CSMD1-216ENST00000602557 EIF3HO15372 352 aaKnown RBP eCLIP9.33□□□□□ -0.92
CSMD1-216ENST00000602557 NCK2O43639 380 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 ACTN1P12814 892 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 MLH1P40692 756 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 CNGA3Q16281 694 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 SGO2Q562F6 1265 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 LSG1Q9H089 658 aaKnown RBP9.33□□□□□ -0.92
CSMD1-216ENST00000602557 RNPEPQ9H4A4 650 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 BATF3Q9NR55 127 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 GID8Q9NWU2 228 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 MCM8Q9UJA3 840 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 HAUS5O94927 633 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 ATXN8OSP0DMR3 200 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 ADCY2Q08462 1091 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 LRRC24Q50LG9 513 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 PLA2G4DQ86XP0 818 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 SSH3Q8TE77 659 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 CDKL2Q92772 493 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 CHMP6Q96FZ7 201 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 SEPT9Q9UHD8 586 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-216ENST00000602557 MAN1B1Q9UKM7 699 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 A0A1W2PQ27 194 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 A0A1W2PQ64 194 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 A0A1W2PQD8 194 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 GPC4O75487 556 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 MAP4P27816 1152 aaKnown RBP9.33□□□□□ -0.92
CSMD1-216ENST00000602557 ADCK5Q3MIX3 580 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 BTNL9Q6UXG8 535 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 FBXO11Q86XK2 927 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 CYFIP2Q96F07 1278 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 CCT8L2Q96SF2 557 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.33□□□□□ -0.92
CSMD1-216ENST00000602557 METTL14Q9HCE5 456 aaKnown RBP9.33□□□□□ -0.92
CSMD1-216ENST00000602557 TCP10L2B9ZVM9 353 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 ATP6V1B1P15313 513 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 PABPC4Q13310 644 aaKnown RBP eCLIP9.33□□□□□ -0.92
CSMD1-216ENST00000602557 CRYMQ14894 314 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 FAM133AQ8N9E0 248 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 STAMBPL1Q96FJ0 436 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 ORAI2Q96SN7 254 aa9.33□□□□□ -0.92
CSMD1-216ENST00000602557 KCNQ3O43525 872 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 GADL1Q6ZQY3 521 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 PHF20L1A8MW92 1017 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 CUL1Q13616 776 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 ADCK1Q86TW2 530 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 TRIM42Q8IWZ5 723 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 RASGRP4Q8TDF6 673 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 NHEJ1Q9H9Q4 299 aaPredicted RBP9.32□□□□□ -0.92
CSMD1-216ENST00000602557 STX18Q9P2W9 335 aaKnown RBP9.32□□□□□ -0.92
CSMD1-216ENST00000602557 LPXNO60711 386 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 POLR2BP30876 1174 aaKnown RBP9.32□□□□□ -0.92
CSMD1-216ENST00000602557 DRP2Q13474 957 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 MICAL3Q7RTP6 2002 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 PFDN6O15212 129 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 GFPT2O94808 682 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 MAPK4P31152 587 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms